Siniperca chuatsi (mandarin fish): 122871533
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Entry
122871533 CDS
T08948
Symbol
lum
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
schu00535
]
122871533 (lum)
Proteoglycans [BR:
schu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
122871533 (lum)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_14
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122871533
NCBI-ProteinID:
XP_044042679
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Position
LG23:complement(8184176..8188384)
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AA seq
342 aa
AA seq
DB search
MFPLRGPLLAVLVSVALCQDYYDDYQPLSILGPSGPNCNQECDCPIMFPSAMYCDNRKLK
FVPIVPTGIKYLYLQNNQIEEIKAGVFDNVTDVLRWLVLDNNQITNAKIAKGTIDKLTAL
EKLFFSNNNLTEPVVPPSKSLDELKMMHNKLSKFPSGLLIDKENLTSINLQHNQLTSDAI
AGAFKGPKKLLSLDVSHNKLKKLPAGIPSSLEILYADYNDIDGVGAGYLNKLPSLQYLRI
SHNKLVDSGLPAGVFNASSLVELDLSFNKLQSIPEINEQLEQLYLQANEINKFDLASFCK
FIGPLNYSRLKHLRLDANNITHNSMPPDSSNCLRQASDIMFE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctctccgtggacccctgttggctgtattggtcagcgtagccctgtgccaggat
tattacgacgactaccagcctctttccattctaggaccctcagggcccaactgtaatcaa
gaatgcgattgcccaatcatgttccccagcgccatgtattgcgacaaccgcaagctcaag
tttgttcccatagtcccaacagggatcaagtacctgtacctccagaacaaccagatagaa
gagatcaaggctggtgtgtttgataatgttactgatgtacttcgatggctggtacttgac
aacaaccagattaccaatgctaagatagcaaagggcacaattgacaaactcacagccctg
gagaagctattcttcagcaacaacaacctgacagagccagtcgtccctccctcaaagtcc
cttgatgagctgaagatgatgcacaacaaattgtccaagttcccctctggactcttgatc
gacaaagagaatttgacctccatcaaccttcagcacaatcagcttacctctgatgccatt
gcgggggcattcaaagggccaaagaagctgctgtccctggatgtgagccacaacaagctg
aagaagctgccagccggaatccccagttcactggaaatcctctatgctgactacaacgac
attgatggtgttggagcaggatacctgaacaagctgccctcactgcagtacctaaggatc
tcccacaacaagctggtggactccggactccctgctggagtgttcaatgcgtcatcgcta
gtggagctggatctgtctttcaacaaactgcagtccatccctgagatcaacgagcagctg
gagcaactctacctccaggccaacgagatcaacaagtttgacctggcaagtttctgcaag
ttcattggacccctcaactattcccgcctgaagcatctgcgtctggacgccaacaacatc
acacacaacagcatgccccctgactcctccaactgcctgcgccaagcttcagatatcatg
tttgaataa
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