Siniperca chuatsi (mandarin fish): 122871540
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Entry
122871540 CDS
T08948
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122871540 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122871540 (nup107)
03036 Chromosome and associated proteins [BR:
schu03036
]
122871540 (nup107)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122871540 (nup107)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122871540 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
TetR_C_31
Motif
Other DBs
NCBI-GeneID:
122871540
NCBI-ProteinID:
XP_044042694
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Position
LG23:3156128..3173737
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AA seq
905 aa
AA seq
DB search
MDWGQSELPSPVVRDDEVTIAARRRRKKVAFPSPGSPVVSTATPARSLLRTPASLYRQAV
TPRVPDVSSILATGGRTPRYTHTPRNALSSLNLDDSDWTNTMYISPVSGLENTSFFTDDI
TNLSSALLKEDDPGEAAAASLFPEFLGSFLKHSSSAVFELLEEYQALCQDKVDVLQSVVL
RAGQNSKTAGVRWLLQQENCSWRLITSLYRDRVQLALEDDIMTDMVVPSESEKVVVEQLF
QRDAAIRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHALKLRRQSGAAFTVP
LVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQAWRAATL
EGWKLYHDPNMTSGSKELQPVEGNPQRGIWKACCWRMADEEQLNRYERAIYAGLSGNLKP
LLAVCESWEDCVWAHFRVMVDSLVEKDLMSSGMAHQEVETLPREYLEANWTMEKVFEELQ
ASESKRVLEETREHYHVIQKFVILGDLDGLLEEFSGWLTASKPLPSHLLRFMTHLLLFFR
SLGLALKEEACVDVLKAYISLLIRDQQTDLVASYVSQLPAELATAQYAAFLETVNQPELR
PRCLQLATDAGLDVAAVTKLVVETVRERDETEFTHHNQTLESGTTKEDLRKIDVIDWLLF
DPAHRAESLKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMREIYCQWAGIGQTTPLPAED
ENAIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPAPDAKFTERVANEMREKEYQASLS
AWSCRLDALTEDVKERIYNVLLFVDGGWMIDNRQDSESDSERSHQMAALRSLCLPRLSFL
LLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLSLLDQTLDPLG
YELQP
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagagtgagctgccgtctccggtggttcgagacgacgaggtgacgatc
gctgcccgtaggagaaggaagaaggtggccttcccgtcacccggcagccccgtcgtttcc
acagcaacaccagcccgctccctgctgaggactcctgcttcactgtacagacaggctgta
actcccagggttccagatgtttcctccattttggctacaggaggtcgaacgcctcgatac
acacacacgcccagaaacgcactcagcagtctgaatttggatgacagtgattggaccaac
accatgtacatctcccctgtttcgggattggagaacaccagcttcttcacagatgacatc
accaaccttagctcagccctgctaaaggaggacgacccaggcgaggccgcggctgccagt
cttttcccagagttccttgggtcttttctgaaacactcttcctctgcggtgtttgagctg
cttgaggagtaccaggcactctgccaggacaaggtggacgttctgcagtctgtggtcctc
agagcgggtcagaacagtaaaacagcaggagtccgctggctgctgcagcaggagaactgc
tcctggagactcatcacctcactgtacagggatcgggtccagttggcgctggaagatgac
atcatgacagacatggttgttcccagtgagagcgagaaggtcgtggtggagcagcttttt
cagcgggatgctgccatacgacagagtcagctggtcgttgattggctggagagcattgcc
aaggatcagattggtgatttttccgataacatagaatactacgccaaaaacgtctgctgg
gagaacaccctccatgcgctgaagctgaggagacagagcggcgcagccttcactgttccc
ctggtcactgagctggacccagatgctcctctccgacagcagcgacccctggctgacctg
gacagagaggatgatgcccgactgctgaagaacctgttcaccctgatcagagcggggatg
accgaggaggctcagaggctgtgtaagcgctgtggacaggcctggagagcagcaacactg
gaaggctggaaactctaccatgatcccaacatgacctcaggcagtaaagagttgcagcct
gttgaaggaaaccctcaaagaggaatctggaaggcctgctgctggagaatggctgacgag
gagcagttaaacagatatgagagagcgatctacgctggcctgagtggaaacctcaaaccg
ctcctggcagtgtgtgaatcatgggaggactgcgtgtgggcgcatttcagagtgatggtc
gactcgctggttgaaaaggatctgatgtcatcgggtatggcccaccaggaagtggagact
ctgccacgagaatacctggaggccaattggacaatggaaaaggtgtttgaggaacttcaa
gcctcagagtcaaagagggtattggaggagacaagagaacattaccacgtcatccagaag
tttgtcatcctgggagacctggacggtctgttggaggagttttctggttggctgacagcc
tctaagcccctcccctcccaccttctgcgtttcatgactcatcttctgctgtttttccgc
tctctgggtttggcactgaaggaggaggcgtgtgtggatgtgctgaaggcgtacatctcc
cttctgattcgggatcagcagactgaccttgtggcgagctacgttagtcagctaccagcc
gagctcgccaccgctcagtacgctgctttcttggagactgtcaaccagcctgagctccgc
ccccgctgcctgcagctcgccacggatgccggtctcgatgttgctgcggtaaccaaactg
gtggtggagacggtgagagagagagacgaaaccgagtttacacaccacaaccagacgctg
gagtcgggaactacaaaggaggacctaagaaagattgacgttattgattggctgctgttt
gaccccgcccatcgagctgagtccctgaagcagtccaacgccatcatgaggaagttttta
gccctgcagaaacacgacgctgccaaggcggtgttctctaaagttccagaggattcaatg
agggagatttactgccagtgggcggggatcggtcagaccacacccctacctgctgaggat
gaaaatgccatcagagaacacctgtgtatcagagcatacctggaagcccacgaggccttc
actgactggttcagccacagtagctctgccccccagaagccagcacctgcccctgatgcc
aaattcacagagagagtagccaatgagatgagagagaaggagtaccaggcctccctgtct
gcctggtcgtgccgtctggacgctctaactgaagatgtgaaagagagaatctacaatgtg
ctgctgttcgtagatggaggatggatgatcgacaacagacaggattcagagtcggattca
gagcgcagccaccagatggcggcgttacgctctctgtgtctgcctcgcctcagcttcttg
ctactcagcgtgctgcagaactcctccagacaccaggaggcgctgcgactcgctgacatc
atctcatcagaccagcaccgcctctaccaggttttctctaaagaggagctgaggaggttc
cttcagaaattgagggagtcgtcactctctctgttggaccaaacacttgacccgctgggc
tacgagttacagccatga
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