KEGG   Siniperca chuatsi (mandarin fish): 122871595
Entry
122871595         CDS       T08948                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:schu01009]
    122871595 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122871595 (kdm5a)
Enzymes [BR:schu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     122871595 (kdm5a)
Protein phosphatases and associated proteins [BR:schu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122871595 (kdm5a)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122871595 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S zf-PHD-like
Other DBs
NCBI-GeneID: 122871595
NCBI-ProteinID: XP_044042839
LinkDB
Position
LG23:14469782..14487697
AA seq 1750 aa
MSAFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKVLDLYQLSKIVSS
EGGFETVCKEKRWSKVASRMGFPSGKGTGSLLRSHYERILYPYELFQSGATLTGIQRLYD
EGDDAEELDEGVGEEAVEEEEQDEEEDKEKDGEGDASQTKDQLLPERRSRRLKSERENKE
PKGLKFFGTSPKMVGLEIVSADDGFNKKQRHLKAQAFAIKMRPRKETLEVNFIPQIDLYL
CLVCGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVVEECSKPREAFGFE
QAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISS
KEVGSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGM
CFSSFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLLHQ
LVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMG
RQCVAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVFKEMGDMMEEETKLRQAVQE
IGVLSSEQEVFELLPDDERQCHKCKTTCFLSALTCSCSPDRLVCLNHAADLCDCPLGNKC
LRYRYDLEEFPSMLYGVKTRAQSYDTWSKRVTEALAADQKNKKDLIELKVLLEDAEDRKY
PEKALFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESSRNRTKLTVDELKAFVDQL
YRLPCIISQARQVKELLENVEDFHERAQVALSDELPDSSKLQALLDLGSGLDVELPELPR
LKQELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSE
KWEDKARACLQARPRHSMVTLESIVLEARNIPAYLPNILALREALQKAKEWTAKVEAIQS
GTSYAYLEQLESLLARGRSIPVRLDPLAQVESQVAAARAWRERTARTFLKKNSTYTLLQV
LSPRADIGVYGNSKSKRKRVKELMEKERGGFDPDALSDLEESLEEVRDPTTVVAAFKAKE
QKEVESIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKT
GSQKKLGVGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTE
RAMSWQDRARRSLATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQG
HIQTFQQSGFSRATSPRQCVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVK
SEEVVSHMWPAATPSFCAEHAYSSASKSCVQNVSTPRKQPRKTPLVPRSLEPPVLELSPQ
AKAQLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMEKPLKIKLK
DSEKKRKRKLERAEHHHMLMAVAGGASAMGDMRPAKSKELKRVGLELGLGGKPKKKKLKL
NLDKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIREGLEKRKEKKILDIPSKYDWSGAE
DSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICVDCSRK
AAGASGGGGGMSVEEVAEESVVVLAASLCAGGMQSLPSSSVVAAWSHTSSASHLNPATSH
QQQQEPQQGS
NT seq 5253 nt   +upstreamnt  +downstreamnt
atgtctgcatttgctgagttcgtcccccctcctgaatgcccggtttttgaaccgagttgg
gaggatttctcggatcctttaggatttatcaacaagatccgacccattgcagagaaaacg
ggcatctgcaagatccgaccccccgaggactggcaacctccgtttgcctgcgatgtacgc
aacttccgcttcactcctcgagtacaaagactgaatgaacttgaggcactcactcgggtt
aagctcaactttctggatcaaatcgcaaagttctgggagctgcagggatccaagatccga
ttccctcatgtggagagaaaggttttggacctctaccagctcagcaagattgtgtcgtca
gagggcggctttgagacggtgtgtaaagagaagaggtggtccaaggttgccagccgaatg
ggcttcccatccgggaaaggcactggctcactgctgcgctcccactatgagaggatcctt
tacccatatgaactcttccagtctggggccacgctgactggcatccagcggctatacgat
gaaggagatgatgcggaagaactggatgagggagttggtgaggaggcagtagaggaagag
gagcaagatgaggaggaggataaggagaaagatggggagggtgatgcatcgcaaactaaa
gaccagcttctgcctgagagacgctccaggcgtcttaagtctgagagggaaaacaaggag
ccaaaaggcctaaagttctttggtacaagccctaagatggtcggcttggagattgtatca
gctgatgatggattcaacaagaagcagcgtcacctcaaagcccaggccttcgccatcaaa
atgagaccacgcaaggagaccctggaggtcaactttatcccccagatcgacctctacctc
tgcctggtgtgtggacggggcgatgaggaggaccggctcctgctgtgtgacggctgtgac
gacagctaccacaccttctgcctgatcccacctctacaggatgtgcccaagggggactgg
cgctgccctaagtgtgttgttgaggagtgcagtaagcccagggaggcatttggcttcgag
caggctgtgagggagtacactctccagagctttggagaaatggctgaccacttcaagtct
gactatttcaacatgcctgtccatatggtccccacagagttggtggagaaagagttctgg
cgcttggtcagcagcatcgaggaggatgtcatcgtagagtacggagcagacatcagctcc
aaggaggtgggcagcggatttcctgtcagggacgggaaaaggaggctgctgggagatgag
gaggagtatgccaactcaggctggaacctgaataacatgccagtcttggagcagtcggtg
ctcacccatatcaatgtggacatctccggtatgaaggtgccctggctctatgtgggcatg
tgtttctcctcattctgctggcacatcgaggaccactggagttactccatcaacttcctg
cactggggagagccgaagacatggtatggagtaccggcctctgcagcagagcagctggag
gctgtaatgaaaaagttggctccagagttgtttgactcccaacctgacctcctccatcaa
ctggtcaccatcatgaatcccaatgtcctcatggagcacggtgtgcctgtgtacaggacc
aatcagtgtgcaggggagtttgtggtgactttccccagggcctaccacagtggcttcaac
cagggctacaacttcgcagaggccgttaacttctgcaccgctgactggttaccgatgggt
cgtcagtgtgtggcccattaccgacgcctccaccgctactgcgtcttctcccacgaggag
ctgctgtgcaagatggctgctgatccagaaagtcttgacgtggaactggctgctgccgtc
tttaaggaaatgggagacatgatggaggaggagacaaaactcagacaggctgtccaagaa
ataggggtgctgtcgtcagagcaggaggtttttgaacttttacctgacgacgagcgccag
tgtcataagtgtaagacaacctgtttcttgtctgcactgacgtgttcctgcagccctgat
cggttggtctgtctcaaccatgcagcagatctctgcgactgtccgcttggaaacaagtgt
cttcggtatcgctatgatctggaggagtttccgtccatgctgtatggggtcaagacacgg
gctcagtcttatgacacctggtcaaagagggtcactgaggccttggctgctgaccagaaa
aacaagaaagatcttattgagctcaaggttttgctggaggatgcagaggacaggaagtat
cctgagaaagctttgttccgtcgcctgagggagatggtgaaagaggcggagacatgctcc
tctgtagctcagctgctgctgagccgcaaacagaggcacagcagccgtctgcgttctgag
agcagtcgtaaccgcaccaaactgacagtggatgagctcaaggccttcgtggatcagctc
tacaggctgccctgcatcatcagccaggcccgacaggtcaaagagttactggagaatgtg
gaggacttccacgagcgagcccaggtggcactgtcagacgagttgcctgattcctccaag
ctgcaagcactattagacctaggtagcggcctggacgtagagctgccagagctgccccga
ctgaaacaggagctccagcaggcccgctggctcgatgaggtgcgtgtcaccctggccgag
cctcatcgcgtcaccttggagctgatgaagaggctgatagactctggggtgggcctggct
ccccaccatgctgtggagaaggccatggccgagctgcaagagatcctcactgtctcagag
aaatgggaggataaggcccgtgcctgcctgcaggccaggcctcgacacagcatggtgact
ttggagagcattgtactggaagcaaggaacatcccagcgtacctacctaatattttggcc
ctccgagaggcactacagaaggccaaggagtggacagctaaggtggaagccattcagagt
ggcaccagctatgcttacctggagcagctggagagcctgctggccaggggtcgctccatt
cccgtccggcttgatccactggcccaggtggagtctcaggtggccgcagcacgagcctgg
agggagaggaccgctcgcaccttcctcaagaagaactccacgtacacactgctccaggtc
ctcagccctcgtgcggacatcggggtctacggcaacagcaagagcaagaggaaacgcgtc
aaggaactcatggagaaggagagaggaggctttgaccccgacgccctgagcgacctggag
gagagcctcgaagaggttcgagaccccaccaccgttgtagcggccttcaaagccaaagag
cagaaagaagtggagtccatccactcactccgtgccgccaatttggccaaaatggccatg
gccgaccgcatcgaggaggtcaagttctgcctgtgtcgaaagacggccagcggcttcatg
ttgcagtgcgagctttgtaaggactggttccacggagcgtgcgtgcctctgccaaagacg
ggatctcagaagaagttgggtgtgggttggcagagcaatagcaaagactccaaattcctt
tgtccgctgtgtcagcggtcgaggaggccgagattagagaccatcctgtcactgttggtg
tcgctgcagaagctgccggtgcgtctgcctgaaggagaagccctccagtgtttgactgag
agggcgatgagctggcaggaccgagcacgtcgatctctggccacggaggagctgtcctca
gccctggcaaagctttctgtgctgagccagcgcatggtggagcaggctgctagggagaaa
actgagaagatcatcaatgccgagctgcagaaagctgctgccaaccctgacttgcagggc
cacatccagacttttcagcagtcaggtttcagcagagccacatcaccccgccagtgtgtg
gactacgatgatgaggagacagactcagacgaggacatcagggagacttacggttatgac
atgaaggacccgggcgaggtgaagccctacctgttctgtgatgaggagattcctgttaag
tctgaggaggtggtcagtcacatgtggccggctgccacgccctccttctgcgccgaacac
gcctactcttcagcctcgaagtcctgtgtgcaaaacgtgagcacgcccaggaagcagcct
aggaagacccctctggtacctcgcagcctggagccgccagtgctcgagctgtccccgcag
gctaaggcccagctggaggagctgatgatgctgggagacctgctggaggtgtccctggat
gagacccagcacatctggaggatcctgcaggccacgcaccccccctctgaggagagattc
ctgcaggtcatggagcccgatgactctctgatggagaagcccctgaagatcaagcttaaa
gattcagagaagaagaggaaacggaagttagaaagagccgagcaccaccacatgctgatg
gctgtcgccggtggggcttcagcaatgggcgacatgcgaccggccaagtccaaagagctg
aaaagggtgggtctggaactgggtcttgggggcaaacccaagaagaagaaactcaaactc
aacctggacaagaaccgggagatgaagcagctggccaaacggttagccaaggaggagaag
gagaggaagagaaaggagaaggcagcggccaaggcagaggccatcagggaggggctggag
aagaggaaggagaagaagattctcgacattccctccaagtacgactggtccggggctgag
gactccaacgatgagaacgctgtgtgtgcagccaagaactgccagagaccctgtaaagat
aaggtggactgggtgcagtgtgacggcggctgcgatgagtggttccaccaggtgtgcgtg
ggcgtgtcgtgcgaaatggccgagaacgaggactacatctgcgtggactgctcccgtaag
gccgccggggcgagcgggggtggcggaggaatgtccgtggaggaggtggcggaggagagc
gtcgtagtgctggcggcgtcattgtgcgctggcggcatgcagagcttgccatcgtcgtct
gtcgtggccgcgtggtctcacacatcctccgcctctcatctaaacccagcaacttcacat
cagcagcagcaagagcctcagcagggcagttag

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