Siniperca chuatsi (mandarin fish): 122871807
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Entry
122871807 CDS
T08948
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122871807 (sox1b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122871807 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122871807
NCBI-ProteinID:
XP_044043144
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All DBs
Position
LG24:9308524..9312791
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AA seq
349 aa
AA seq
DB search
MYSIMMETDLHSPVVPQTNPSNPGGHAGAGGKVPQDRIKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKVMTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKD
KYSLAGGLLGSSAGVGMGGGQRLESPGGCHAGANAGYATHVNGWANGTYSGQVAAAAAAA
HAMMQEAQLAYTQHPGTGAHPHHPHPHHHPHHHPHNPQPMHRYDMSALSYSPISNSQSYM
SASPPGYGGITGYTHQHQSSGVSPVSGTIGGTLGSLVKSEPSVSPPVSTARAPPPCPTGD
LRDMISMYLPTGEAAGDSSVHSRLHVLHPQHYQSSGSTPVNGTVPLTHI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatcatgatggaaacggacttacattcccccgtggtgccccagaccaaccca
tccaacccggggggacacgcgggggccggtggcaaggtcccccaggacagaatcaagaga
cccatgaacgccttcatggtctggtcccggggccagcggaggaaaatggcacaggagaac
cccaagatgcacaactctgagatcagcaagcggctgggcgcagagtggaaggtgatgacc
gaggcggagaagaggccgttcatcgacgaggcgaagcggctccgggccatgcacatgaag
gaacacccggactacaagtaccggccgcggaggaagaccaagacgcttctgaagaaggac
aaatactcgctggccggcgggctcctcggctcctctgcgggtgtagggatgggcggcggg
cagcgactggagagccctggagggtgccacgcaggggcaaatgcgggctacgccacgcac
gtgaacggctgggctaacggcacatactcgggccaggtggcggctgcagcggcggcggct
cacgcgatgatgcaggaggcgcagctggcatacacgcaacacccgggcaccggagctcac
ccgcaccacccgcatccacatcatcacccgcatcaccacccgcacaacccacagccaatg
cacaggtacgacatgagcgccttatcttacagccccatctcaaactctcagagctacatg
agcgcctctccaccgggctacggcgggatcaccggctacactcaccagcaccaaagctcc
ggtgtctccccggtgtccgggacgatcggagggactttggggtcccttgtgaaatctgag
cctagcgtgagccccccggtttccaccgcgcgcgcaccgccgccgtgccctacgggggac
ctgcgggacatgatcagcatgtatctgccgaccggcgaggcggcgggggactccagcgtt
catagcagactgcacgtgctccacccgcagcactaccagagcagcggctccactccggta
aacgggacggttcctctgactcatatttaa
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