Siniperca chuatsi (mandarin fish): 122871844
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Entry
122871844 CDS
T08948
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122871844
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122871844
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122871844
NCBI-ProteinID:
XP_044043226
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All DBs
Position
LG24:complement(9638587..9656358)
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AA seq
956 aa
AA seq
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MGQKDHVEAGAGHILDLGLDLEYLHVAGADRQAGGADGPPAMEEQGESSGNSSGANSPPP
AVVEENAGSVEECEPAPSSSATLAAGPDPDGGEGGLTHSKNTHQPLCRTQCVDLGTEGPP
EPPSELPSELEHDTPAQSSLSSPCKHPPEAPPNPSTSEPASGAGGKEYQAKLEFALKLGY
SQETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSSSSSSSSCGYSDLL
DSQRSDSPCPSDSLCDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDI
TVFVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYE
SDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKR
PVMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVATKNQGDTGL
VKSHSVPAGSIEAKKGAQKRQSDPSIRALSYSDAEEKLLAKGRAESQKNTMCGSSSSSSC
SGSATMSPAQGGGPPSSLSFPQDQQSRAATPHGLPAPSHDLYPHCESPDLSYYSVTRAYS
GLTLSSRRSPDCRFPNDTDLRIGSMGSAGSECGSESSVSCGSSCESYSERPCPGCPPDTL
LEDSVHFANPHSRLYPHHAASNHELCGLHPADYTNIQHSYHLSVARGQNCAHDQPPPEAP
PKRPLYPLPPHLQHQPLAARSSCPGDYHSLPQSNLHPPGSPLGRCLAPTRAESVSDSHLY
EHLSTSHHHHRTKALPGWDTYYRQPPLPPSRYEPSAYQSLPDTRQSSWHAPPWAQDGYAQ
HHSSHPALHPSPTHYHPLPPAHSPHPPHPSSTPLPPYQPHSAHLTVPSHAPPSYISQHPE
SPAHSRYGDVREKVYVNLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKAQTGY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggagcaggccacatcctcgacttggggctggat
ttggagtatctccacgtagcaggggctgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggagagctccggcaacagcagcggcgccaattcccctccaccg
gctgtggtggaggaaaatgctgggtctgttgaagaatgtgagccggcgccgtcttccagc
gccaccctcgctgccggcccggacccggatggaggagagggagggttaactcacagtaag
aacacccaccagccgctttgtcggacccagtgtgtggacttaggcactgaaggtcctcct
gagcccccatctgaactcccatcagagcttgaacacgacacccctgcacagtcctcactc
agctccccatgtaagcacccacctgaggctccacccaatccctccacatcagagccagca
tccggggctggtgggaaggaataccaagctaagctggagtttgccctgaagctcggctac
tctcaggagacagtgcgactggtgctgtccaagcttggccctgacaccctcatcaatgac
atactgggagagctggtcaaactgggcaccaagtcagacagcgagcagccggctggatca
ttagcctctacctcatcttcttcatcctcctcttcctcttgtggctattccgatttactg
gatagccagaggtcagactcgccctgtccttcagactctctgtgtgaccaggacaacctg
cggccaattgtcgtggatggcagtaacgtagccatgagccatggcaacaaggaagtgttt
tcctgccaggggatccagctggctgtagattggttcctagagcgtggccatcatgacatc
acagtatttgtgcctgcatggaggaaagagcagtcccgccctgatgcccctataacagat
caggagatcctgcgtcgcctagagaaggaaaagatcctggtcttcactccttcgcgccgt
gtccaaggtcggagagtggtttgctatgacgaccgcttcattgtcaaactggcctacgag
tcagacggtatcattgtctccaatgataactaccgagacctggctaatgagaagcccgag
tggaagaagttcatcgatgagcggttgctcatgtattcctttgtcaatgacaaattcatg
cccccagatgaccctcttggtcgtcatggccccagcttagacaacttcctgaggaaaaga
cccgtcatgcctgagcagaagaaacagccttgcccatatggaaagaagtgcacttacggc
cacaagtgtaagtactaccacccagaaagaggtgctcagcctcagcgcgctgtggctgat
gagctgcgtgctagtgccaagacctgtgttgccacaaaaaaccagggggacaccgggctg
gtgaagagccacagtgtgccagctggcagcattgaggcaaaaaaaggcgcccagaaaagg
cagtcagaccctagcatccgagctctgtcatacagtgatgctgaggagaagctgctggca
aaagggagggcggaaagccagaagaacactatgtgtggcagcagcagtagcagtagttgc
agtgggagtgcaacaatgtccccagcccaaggaggaggccctccatccagtcttagcttt
ccccaggaccaacagtccagagcagcaactccacatggtctaccagcccccagccatgac
ctttaccctcactgcgagtctccagacttgagctactactcagtaacgcgggcctactct
ggcctgaccctctcctccagacggagcccagactgtcgcttccccaatgacacagacctg
cgaataggctcaatgggctcagcaggctccgaatgtggcagcgaaagcagcgtgagttgc
ggtagcagctgcgagtcgtacagtgagagaccgtgtcctggatgccccccagacaccttg
ctggaagatagcgtccattttgctaatccccacagccggctgtatccccatcatgccgca
tcaaaccatgaactttgtggccttcatcctgccgattacacaaatatccaacacagctac
cacctgagtgtggcacgcgggcagaactgtgctcatgatcagcctcccccagaggctccc
ccaaagcgccctctctaccccttgccgcctcatctccagcaccagccactggctgcacgc
tccagctgcccaggtgactaccactctctgccccagtccaaccttcacccccctggctct
cctcttggtcgctgcctggcccccacacgagcagagagtgtgtcagactcacatttgtat
gaacacctctctacatcacaccatcaccaccgtactaaagctttgcccggctgggacaca
tactacagacagcctccattgccgccgtccaggtatgagccatctgcctatcagagcctg
ccagacacacgccagtcatcctggcacgcccctccctgggcacaagacggctatgcccag
caccactcctctcacccagctctccacccatccccaacacattaccacccactgcctcca
gcccactctcctcacccacctcatccatccagcactcctctcccgccctaccagcctcac
agtgctcaccttacagtgccctcccacgctcctccctcctacatatcgcagcacccagaa
tcccctgcacacagccgctacggggacgtgagggagaaagtctacgtcaacctgtgtaac
atcttcccctcggagctggtgagccgggtgatggccaggagccctcacatcacagacccc
cagcagctggcagccgccatccttgcagagaaagcccaaacaggctactga
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