Siniperca chuatsi (mandarin fish): 122871892
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Entry
122871892 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122871892
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122871892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NACHT
NLRC4_HD2
LRR_6
NOD2_WH
SPRY
LRR_4
PRY
DFF-C
DUF5876
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
122871892
NCBI-ProteinID:
XP_044043394
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All DBs
Position
LG24:complement(1518425..1528941)
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AA seq
1205 aa
AA seq
DB search
MNQCEDREEGALPXKTSLCGEHGSQTRAQRPEQQRPDSAGPGPESEPEPGPGPEPSCVSL
KSDWSNDHIINFKGRQPSAAKRIYGRPASAGPGPESEPEHGPGPSCVSFKSDQSKGRIID
FKGRQPSAAKRVDQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVKNELKKMQKVLGS
DYPECLESQREDEEVLDGKEEEQRRSSREAFLKITLHFLRRMKQEELADCLQIRSHSGVW
QRKLKSNLKQKFQCVFEGIAKAGNPTLLNQIYTELYITEGGTAEVNDEHEVRQIETASRK
PDRPETTIRQEDIFKPSPGRDEIIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFT
FPFTFRELNVLKKKYSLVELVHHFFTETKEAGICRFEEFQVLFIFDGLDECRLPLDFHNN
EILTDATTSTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPSECVDMVTEVRGFTDPQ
KEEYFRKRFRDEEQASSIISHIKTSRSLHIMCHIPVFCWITATVLEEVLKTREGGELPKT
LTEMYIHFLVVQSKLKSIKYDGGAETDPHLNXKSRKMIVSLGKLALEQLQEGNLIFYESD
LTECGIDIRAASVCSGVFTQIFREERGLYQNEVFCFVHLSIQEFLAALHVHLTFINSGVN
LLSEEQSTYLESAVTHLYQCAVDQALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTRKG
SRSQTSPETVEYIKKKIEEIPSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLSTDKLS
PAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNKALLSGCNLSKRSCEA
LSSVLGPQSSSLRELDLSNNDLQDSGVKLLTAGLESSHCKLETLRLSGCNLSKRSYEALS
SFLSSQSSSLRELDLSNNDLQDSGVKLLTAGLESPHCKLETLRLSGCLITEEGCASLASA
LSSNPSHLRELDLSYNHLGDSGVKLLSAGLEDPHWRLDTLRVEPGGVRWLRPGLRKYSCE
LTLDTNTANREIQLSDDNRKAIYDTLKSFYSRIKIFLNHPWSQLLCRNGLTGRCYWEVEW
RGRVFISVSYRGISRRGRSGDCLFGWNDQSWSLSCSDDDGYSICHNKRVTSISSSSSSSS
SSSSVSDRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLYPGFAIWSWSRSGSSV
SLCSL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtgtgaggacagagaggagggagccctccctnctaaaaccagtctgtgtggg
gaacatggcagccagaccagagctcagaggccagagcagcagagaccagactctgctgga
cctggacctgagtctgaacctgaacctggacctggacctgagcccagctgtgtgtccttg
aagagcgactggtcaaatgatcacatcattaattttaaaggacgacagccctctgctgca
aagaggatctatgggaggccagcctctgctggacctggacctgagtctgaacctgaacat
ggacctggacccagctgtgtgtccttcaagagtgaccagtcaaagggtcgcatcattgat
tttaaaggacgacagccctctgctgccaagagagtcgaccaggagagctcagaggttccc
agtggtcagtctgcccagcagcatcaaacacacctggactccatatttatgctgctggag
gagaacattgtcacttttgtgaagaacgagctgaagaaaatgcagaaggttctgggatca
gattacccagaatgcttagagagtcagagggaggatgaggaggtgttggacggtaaggag
gaagagcagaggaggagcagcagagaggcatttctgaagatcacactgcacttcctgagg
agaatgaagcaggaggagctggctgactgtctgcagatcagaagtcattctggagtttgg
caacgtaaacttaaatctaacctgaagcagaagttccagtgtgtgtttgagggaatcgct
aaagcaggaaacccaacccttctgaaccagatctacacagagctctacatcacagaggga
gggactgcagaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaa
ccagacagaccagaaacaacaatcagacaagaagacatctttaaaccctcacctggaaga
gatgaaataatcagaacggtgatgacaaagggagtggctggcattgggaaaacagtctta
acacagaagttcactctggactgggctgaagacaaagccaaccaggacatacagttcaca
tttccattcactttcagagagctgaatgtgctgaaaaagaaatacagcttggtggaactt
gttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccag
gttttgttcatttttgacggtctggatgagtgtcgacttcctctggacttccacaacaat
gagatcctgactgatgctacaacgtccacctcagtagatgtgctgctgacaaacctcatc
agggggaacctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaat
cagatcccttcggagtgtgttgacatggtgacagaggtcagagggtttaccgacccacag
aaggaggagtacttcaggaagagattcagagatgaggagcaggccagcagcatcatctcc
cacatcaaaacatcacgaagcctccacatcatgtgccacatcccggtcttctgctggatc
actgctacagttctggaggaggtgttgaagaccagagagggaggagagctgcccaagacc
ctaactgagatgtacatccacttcctggtggttcagtccaaactgaagagcatcaagtat
gatggaggagctgagacagatccacacttgaattaaaagagcaggaagatgattgtgtct
ctgggaaaactggctttagagcagctgcaggaaggcaacctgatcttctatgaatcagac
ctgacagagtgtggcatcgatatcagagcagcctcagtgtgctcaggagtgttcacacag
atctttagagaggagagagggctgtatcagaacgaggtgttctgcttcgtccatctgagc
attcaggagtttctggctgctcttcatgtccatctgaccttcatcaactctggtgtcaat
ctgctgtcagaagaacaatcaacctaccttgaatctgcagtgacacacttgtaccagtgt
gctgtggaccaggccttaaaaagtccaaatggacacttggacttgtttctccgcttcctc
ctgggactctcactgcagaccaatcagactctcctacgaggcctgctgacacggaaagga
agtcgctcacagaccagtccggaaacagtcgagtacatcaagaagaagatcgaagagatt
ccctctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttct
ctagtggaggagatccaacagtccctgagttcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggatgtg
tttgacctgaagaaatactcagcttcagaggaggctcttctgaggctgctgccagtggtc
aaagcctccaacaaagctctactgagtggctgtaacctctcaaagagaagctgtgaagca
ctgtcctcagttctcggcccccagtcctctagtctgagagagctggacctgagtaacaac
gacctgcaggattcaggagtgaagctgctgacagctggactggagagttcacattgtaaa
ctggaaactctcagactgagtggctgtaacctctcaaagagaagctatgaagctctgtcc
tcgtttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacgacctg
caggattcaggagtgaagctgctgacagctggactggagagtccacattgtaaactggaa
actctcaggctgtcaggctgtctgatcacagaggaaggctgtgcttctctggcctcagct
ctgagctccaacccctcccatctgagagagctggacctgagctacaatcatctaggagac
tcaggagtgaagctgctgtctgctggactggaggatccacactggagactggacactctc
agggtggagcccggtggagtccgatggctgagaccaggtctgaggaagtattcctgtgaa
ctcacactcgacacaaacacagcgaacagagagatccaactgtctgacgacaacaggaag
gcgatatatgacacattaaagagtttttattcaaggatcaaaatatttctgaatcatcca
tggtctcagctgctgtgtagaaatggtctgactggtcgctgttactgggaggtcgagtgg
agaggaagggtatttatatcagtgagttacagaggaatcagcaggagaggacgcagtgga
gactgtttgtttggatggaatgatcagtcctggagtctgagctgctctgatgatgatggt
tactccatctgtcacaataagagagtaacatccatctcctcctcctcctcttcctcctcc
tcctcctcctctgtctctgacagagtagcagtgtatgtggactgtcctgctggcactctg
tccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccacattc
actgaacctctttatcctggctttgcaatctggtcctggtccaggtctggttcctcagtg
tctctgtgttctctgtag
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