Siniperca chuatsi (mandarin fish): 122871899
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Entry
122871899 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122871899
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122871899
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122871899
NCBI-ProteinID:
XP_044043408
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All DBs
Position
LG24:511339..523198
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AA seq
1096 aa
AA seq
DB search
MNQCEDREXGAPPSKTSLCGEHGSQTRAQSPEQQRPDSAGPGPGPESGPGPEPSCVSFNS
DWSIGRLIDFKGRQPSAAKRVDQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVKSEL
KKMQKVLRSDYPECLESQREDEEVLGDEEEEQRRSSREAFLKITLHFLRRMKQEELADRL
EIRSHSGVCQRKLKSNLKEKFQCVFEGIAKAGNPTPLNQIYTELYITEGGTAEVNDEHEV
RQIETASRKADRPETTIRQEDIFKPSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWADD
KANQDIHFTFPFTFRELNVLKEEKYSLVELVHHFFTETKEAGICRFEEFQVVFILDGLDE
CRLPLDFHNNEVLTDVTESTSVDVLVTNLIRGNLLPSARLWITTRPAAANQIPPGCVDMV
TEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSCHIMCHIPVFCWITATVLEDVLK
TREGGELPKTLTEMYIHFLVVQSKLKNIKYDGGAETDPHWTPESRKMIESLGKLAFEQLQ
KGNLIFYESDLTECGIDITAASVYSGVFTQIFIEERGLYQDKVFCFVHLSVQEFLAAFHV
HLTFISSGVNLMSEQQSTSWWSKVFRGESTLFYQSAVDKALQSPNGHLDLFLRFLLGLSL
QTSQTLLRGLLTQTVSGSKTNQVTVEYIKKKIKETPSAEQSINLFHCLNELNERSLVDQI
QQSLSSGNLSTDELSPAQWSALGFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNK
ALLSGCNLSERSYEALSSVLSSQSSNLRELDLSNNDLQDSGVKLLSAGLESPHCTLETLR
LSGCLITEEGCASLASALSSNPSHLRELDLSYNHPGDSGLKLLSAGLEDPHWRLDTLRVE
PGGVRWLRPGLRKYSCELTLDTNTANRYIKLSDNNRKATLMEEDQPYPDHPDRFDRWEQL
LCRNGLTGRCYWEVEWRGEVYISVSYRGISRKGGSEDCVFGLNDQSWSLNCSDVGYSVWH
NNGRTYISSSSSSSSSSVSHRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLYPG
FGVWSRSGSSVSLCSL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtgtgaggacagagagngaggagcccctccctctaaaaccagtctgtgtggg
gaacatggcagccagaccagagctcagagcccagagcagcagagaccagactctgctgga
cctggacctggacctgagtctggacctggacctgagcccagctgtgtgtccttcaacagc
gactggtcaattggtcgcctcattgattttaaaggacgacagccctctgctgcaaagaga
gtcgaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaacacac
ctggactccatatttatgctgctggaggagaacattgtcacttttgtgaagagcgagctg
aagaagatgcagaaggttctgagatcagattacccagaatgcttagagagtcagagggag
gatgaggaggtgttgggtgatgaggaggaagagcagaggaggagcagcagagaggcattt
ctgaagatcacactgcacttcctgaggagaatgaagcaggaggagctggctgaccgtctg
gagatcagaagtcattctggagtttgtcagcgtaaactgaaatctaacctgaaggagaag
ttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaacccctctgaaccagatc
tacacagagctctacatcacagagggagggactgcagaggtcaacgatgaacatgaggtc
agacagattgaaacagcatccaggaaagcagacagaccagaaacaacaatcagacaagaa
gacatctttaaaccctcacctggaagagatgaaccaatcagaacagtgatgacaaaggga
gtggctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgacgac
aaagccaaccaggacatacacttcacatttccattcactttcagagagctgaatgtgctg
aaagaggaaaagtacagcttggtggaacttgttcatcacttctttactgaaaccaaagaa
gcaggaatctgcaggtttgaagagttccaggttgtgttcatcttagacggtctggatgag
tgtcgacttcctctggacttccacaacaatgaggtcctgaccgatgttacagagtccacc
tcagtggatgtgctggtaacaaacctcatcagggggaacctgcttccctctgctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgggtgtgttgacatggtg
acagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcaga
gatgaggaacaggccagcagaatcatctcccacatcaagacatcacgaagctgccacatc
atgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgttgaag
accagagagggaggagagctgcccaagaccctgactgagatgtacatccacttcctggtg
gttcagtccaaactgaagaatatcaagtatgatggaggagctgagacagatccacactgg
actccagagagcaggaagatgattgagtctctgggaaaactggcttttgagcagctgcag
aaaggcaacctgatcttctacgaatcagacctgacagagtgtggcatcgatatcacagca
gcctcagtgtactcaggagtgttcacacagatctttatagaggagagaggactgtaccag
gacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgcttttcatgtc
catctgaccttcatcagctctggtgtcaatctgatgtcagaacaacaatcaacatcctgg
tggtctaaagtgttcagaggtgagtcaacacttttctaccagagtgctgtggataaggcc
ttacagagtccaaatggacacttggacttgttcctccgcttcctcctgggactttcactg
cagaccagtcagactctcctacgaggcctgctgacacagacagtaagtggctcaaaaacc
aatcaggtaacagtcgagtacatcaagaagaagatcaaagagactccctctgcagagcaa
agcatcaatctgttccactgtctgaatgaactgaatgaacgttctctagtggatcagatc
caacagtccctgagttcaggaaatctctccacagatgaactgtctcctgctcagtggtca
gctctgggcttcatcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaa
tactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaa
gctctactgagtggctgtaacctctcagagagaagctatgaagctctgtcctcagttctc
agctcccagtcctctaatctcagagagctggacctgagtaacaatgacctgcaggattca
ggagtgaagctgctgtctgctggactggagagtccacactgtacactggaaacgctcagg
ctgtcaggctgtctgatcacagaggaaggctgtgcttctctggcctcagctctgagctcc
aacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggactg
aagctgctgtctgcaggactggaggatccacactggagactggacactctcagggtggag
cccggtggagtccgatggctgagaccaggtctgaggaagtattcctgtgaactcacactc
gacacaaacacagcgaacagatacatcaaactgtctgacaacaacaggaaggcgacactg
atggaggaggatcagccatatcctgatcatccagacaggtttgaccgctgggaacagctg
ctgtgtagaaatggtctgactggtcgctgttactgggaggtcgagtggagaggagaggtt
tatatatcagtgagttacagaggaatcagcaggaaaggaggtagtgaagactgtgtgttt
ggattgaatgatcagtcctggagtctgaactgctctgatgttggttactctgtctggcac
aataacggaagaacatacatctcctcctcctcctcctcctcctcctcctctgtctctcac
agagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctct
gacacactgatccacctccacaccttcaacaccacattcactgaacctctttatcctggc
tttggagtctggtccaggtctggttcctcagtgtctctgtgttctctgtag
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