Siniperca chuatsi (mandarin fish): 122871904
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Entry
122871904 CDS
T08948
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122871904
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122871904
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
Motif
Other DBs
NCBI-GeneID:
122871904
NCBI-ProteinID:
XP_044043414
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All DBs
Position
LG24:complement(727625..737151)
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AA seq
1051 aa
AA seq
DB search
MNQCEDREEGAPPSKTSLCGEHGSQTRAQRPEQLRPDSAGPEPGPEPGPGPEPSCVSLKS
DWSIGSLIDFKGRQPSAAKRVDQESSEVPSGQSAQQHQTHLDSIFMLLKEDIFTFAKNEL
KKMQKVLSSDYPECLESQREDEEVLECEDEEQRRSSREAFLNITLHFLRRMKQEELADRL
EIRSHSGVCQRKLKSNLKEKFQCMFEGTTKAGNPTPLNQIYTELYITEGGNGEVNDEHEV
RQIETASRKPDRPETTIRQEDIFKPSPGRDEQIRTVMTKGVAGIGKTVLTQKFTLDWADD
KANQDIHFTFPFTFRELNVLKEEKFSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDE
CRLPLDFHNNEVLTDVTKSTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPGCVDMV
TEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPVFCWITATVLEEVLK
TRKRGELPKTLTEKYIHFLVVQSKMKNIKYDGGAETDPHWNPESRKMIESLGKLAFDQLQ
KGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFCFVHLSVQEFLAALHF
HLTFLNSDVNLLSEEQTTSWWSKTRKHKFTVTQFYQSAVDQALQSPNGHLDLFLRFLLGL
SLQTNQTLLQGLLTQTGSRSKTNQATVEYIKKKIEETPSAEKSINLFHCLNEVNDRSLVE
QIQQSLSSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKAS
NKALLSVCNLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLSTGLESPHCKLET
LRVEPGGVRWLRPGLRKYSCELTLDTNTVNRNIKLSDDNRKATHVKEVQPYPDHPDRFDY
WPQLLCRNGLTGRCYWEVEWRGDVDVSVSYRGISRRGRREDCVFGRNDQSWRLNCSDGRY
SVCHNNRETSISSSSSSSSSSSSSSSSSSSVSHRAAVYVDCPAGTLSFYRVSSDTLIHLH
TFNTTFTEPLYPGFGFWFWSRSGSSVSLCSL
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtgtgaggacagagaggagggagcccctccctctaaaaccagtctgtgtggg
gaacatggcagccagaccagagctcagaggccagagcagctgagaccagactctgctgga
cctgaacctggacctgagcctggacctggaccggagcccagctgtgtgtccttgaagagt
gactggtcaattggtagcctcattgattttaaaggacgacaaccctctgctgcaaagaga
gtcgaccaggagagctcagaggttcccagtggtcagtctgcccagcagcatcaaacacac
ctggactccatatttatgctgctgaaggaggacattttcacttttgcgaagaacgagctg
aagaagatgcagaaggttctgagttcagattacccagaatgcttagagagtcagagggag
gatgaggaggtgttggaatgtgaggatgaagagcagaggaggagcagcagagaggcattt
ctgaacatcacactgcacttcctgagaagaatgaagcaggaggagctggctgaccgtctg
gagatcagaagtcattctggagtttgtcagcgtaaacttaaatctaacctgaaggagaag
ttccagtgtatgtttgaggggaccactaaagcaggaaacccaacccctctgaaccagatc
tacacagagctctacatcacagagggagggaatggagaggtcaacgatgaacatgaggtc
agacagattgaaacagcatccaggaaaccagacagaccagaaacaacaatcagacaagaa
gacatctttaaaccctcacctggaagagatgaacaaatcagaacagtgatgacaaaggga
gtggctggcattgggaaaacagtcctaacacagaagttcactctggactgggctgacgac
aaagccaaccaggacatacacttcacatttccattcactttcagagagctgaatgtgctg
aaagaggaaaagttcagcttggtggaacttgttcatcacttctttactgaaaccaaagaa
gcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgag
tgtcgacttcctctggacttccacaacaatgaggtcctgaccgatgttacaaagtccacc
tcagtggatgtgctgctgacaaacctcatcagggggaacctgcttccctctgctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgggtgtgttgacatggtg
acagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcaga
gatgaggagcaggccagcagaatcatctcccacatcaagacatcacgaagcctccacatc
atgtgccacatcccagtcttctgctggatcactgctacagttctggaggaggtgttgaag
accagaaagcggggagagctgcccaagaccctgactgagaagtacatccacttcctggtg
gttcagtccaaaatgaagaatatcaagtatgatggaggagctgagacagatccacactgg
aatccagagagcaggaagatgattgagtctctgggaaaactggcttttgatcagctgcag
aaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagca
gcctcagtgtactcaggagtgttcacacagatctttagagaggagagagggctgtaccag
gacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgctcttcatttc
catctgaccttcctcaactctgatgtcaatctgctgtcagaagaacaaacaacatcctgg
tggtctaaaacaagaaaacacaaatttacagtgacacagttctaccagagtgctgtggat
caggccttacagagtccaaatggacacttggacttgttcctgcgcttcctcctaggactt
tcactgcagaccaatcagactctcctacaaggcctgctgacacagacaggaagtaggtca
aaaaccaatcaggcaacggtcgagtacatcaagaagaagatcgaagagactccctctgca
gagaaaagcatcaatctgttccactgtctgaatgaagtgaatgatcgttctctagtggag
cagatccaacagtccctgagttcaggaagtctctccacagataaactgtctcctgctcag
tggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctg
aagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaagcctcc
aacaaagctctactgagtgtctgtaacctctcagagagaagctgtgaagctctgtcctca
gttctcagctcccagtcctctagtctgagagagctggacctgagtaacaatgacctgcag
gattcaggagtgaagctgctatctaccggactggagagtccacattgtaaactggaaact
ctcagggtggagcccggtggagtccgatggctgagaccaggtctgaggaagtattcctgt
gaactcacactcgacacaaacacagtgaacagaaacatcaaactgtctgacgacaacagg
aaggcgacacatgtgaaggaggttcagccatatcctgatcatccagacaggtttgactac
tggcctcagctgctgtgtagaaatggtctgactggtcgctgttactgggaggtcgagtgg
agaggagatgttgatgtatcagtgagttacagaggaatcagcaggagaggacgcagagaa
gactgtgtgttcggaaggaatgatcagtcctggagactgaactgctctgatggtcgttac
tctgtctgtcacaataacagagaaacatccatctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctcctcctcctcctctgtctctcacagagcagcagtgtatgtggac
tgtcctgctggcactctgtccttctacagagtctcctctgacacactgatccacctccac
accttcaacaccacattcactgaacctctttatcctggctttgggttctggttctggtcc
aggtctggttcctcagtgtctctgtgttctctatag
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