Siniperca chuatsi (mandarin fish): 122871910
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Entry
122871910 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122871910
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122871910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
122871910
NCBI-ProteinID:
XP_044043440
LinkDB
All DBs
Position
LG24:complement(819074..829611)
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AA seq
1041 aa
AA seq
DB search
MKSDRSMDPPISFKDGRHSADQRVDQESSEVPSGQSAQQHQTHLDSIFMLLEENIVTFVK
NELKKIQKVLRSDYPECLESQREDEEVLDGEEEEQRRSSREAFLKITLHFLRRMKQEELA
DCLQIRSHSGVCQRKLKSNLKEKFQCVFEGIAKAGNPTLLNQIYTELYITEGGTAEVNDE
HEVRQIETASRKPDRPETTIRQEDIFKPSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDW
AEDKANQDIHFTFPFTFRELNVLKEEKYSLVELVHHFFTETKEAGICRFEEFQVLFILDG
LDECRLPLDFHNNEILTDVTKSTSVDVLLTNLIRGNLLSSARLWITTRPAAANQIPPGCV
GMVTEVRGFTDPQKEEYFRKRFRDEEQASSIISHIKTSRSLHIMCHIPVFCWITATVLEE
VLKTREGGELPKTLTEMYIHFLVVQSKLKNIKYDGGAETDPHWTPESRKMIESLGKLAFE
QLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREERGLYQDKVFCFVHLSVQEFLAA
LHVHLTFISSGVNLMSEQQKSSWWSKIKKHKPAVTQFYQSAVDQALQSPNGHLDLFLRFL
LGLSLQTNQTLLRGLLTQTGSVSKTXQVTVEYIKKKIEETPSAEKSINLFHCLNELNDRS
LVDQIQQSLSSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEEALLRLLPVV
KASNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNDLQDSGVKLLTAGLESPHCK
LETLRLSGCLITEEGCASLASALSSNPSHLRELDLSYNHPGDAGVKLLSAGLEDPHWRLE
TLRVEPGGVRWLRPGLRKYSCELTLDTNTVNRKIKLSDDNRKATRVKEDQPYPDHPDRFD
RWPQLLCRNGLTGRCYWEVEWRGRVYISVSYRGISRRGRSEDCLFGGNDQSWRLDCSDGR
YSVWHNKRETSISSSSSSVSHRVAVYVDCPAGTLSFYRVSSDRLIHLHTFNTTCTEPLYP
GFGFWFGSWFRPGSSVSLCSL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgacaggtccatggatcctcctatatccttcaaagatggacgtcactctgct
gatcaaagagtcgaccaggagagctcagaggttcccagtggtcagtctgcccagcagcat
caaacacacctggactccatatttatgctgctggaggagaacattgtcacttttgtgaag
aacgagctgaagaagatccagaaggttctgagatcagattacccagaatgcttagagagt
cagagggaggatgaggaggtgttggacggtgaggaggaagagcagaggaggagcagcaga
gaggcatttctgaagatcacactgcacttcctgaggagaatgaagcaggaggagctggct
gactgtctgcagatcagaagtcattctggagtttgtcagcgtaaacttaaatctaacctg
aaggagaagttccagtgtgtgtttgaggggatcgctaaagcaggaaacccaacccttctg
aaccagatctacacagagctctacatcacagagggagggactgcagaggtcaatgatgaa
catgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaaacaacaatc
agacaagaagacatctttaaaccctcacctggaagagatgaaccaatcagaacagtgatg
acaaagggagtggctggcattgggaaaacagtcttaacacagaagttcactctggactgg
gctgaagacaaagccaaccaggacatacacttcacatttccattcactttcagagagctg
aatgtgctgaaagaggaaaagtacagcttggtggaacttgttcatcacttctttactgaa
accaaagaagcaggaatctgcaggtttgaagagttccaggttttgttcatcttagacggt
ctggatgagtgtcgacttcctctggacttccacaacaatgagatcctgactgatgttaca
aagtccacctcagtggatgtgctgctgacaaacctcatcagggggaacctgctttcctct
gctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgggtgtgtt
ggcatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaag
agattcagagatgaggagcaggccagcagcatcatctcccacatcaagacatcacgaagc
ctccacatcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggag
gtgttgaagaccagagagggaggagagctgcccaagaccctgactgagatgtacatccac
ttcctggtggttcagtccaaactgaagaacatcaagtatgatggaggagctgagacagat
ccacactggactccagagagcaggaagatgattgagtctctgggaaaactggcttttgag
cagctgcagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgat
atcagagcagcctcagtgtactcaggagtgttcacacagatctttagagaggagagaggg
ctgtaccaggacaaggtgttctgcttcgtccatctgagcgttcaggagtttctggctgct
cttcatgtccatctgacattcatcagctctggtgtcaatctgatgtcagaacaacaaaag
agctcctggtggtctaaaataaaaaaacacaaacctgcagtgacacagttctatcagagt
gctgtggaccaggccttacaaagtccaaatggacacttggacttgttcctccgcttcctc
ctgggactttcactgcagaccaatcagactctcctacgaggcctgctgacacagacagga
agtgtctcaaaaacangtcaggtaacagtcgagtacatcaagaagaagatcgaagagact
ccctctgcagagaaaagcatcaatctgttccactgtctgaatgaactgaatgatcgttct
ctagtggatcagatccaacagtccctgagttcaggaagtctctccacagataaactgtct
cctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaagatctggacgtg
tttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtc
aaagcctccaacaaagctctactgagtggctgtaacctctcagagagaagctgtgaagct
ctgtcctcggttctcagctcccagtcctctagtctgagagagctggacctgagtaacaac
gacctgcaggattcaggagtgaagctgctgacagctggactggagagtccacattgtaaa
ctggaaactctcaggctgtcaggctgtctgatcacagaggaaggctgtgcttctctggcc
tcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatcca
ggagacgcgggagtgaagctgctgtctgctggactggaggatccacactggagactggaa
actctcagggtggagcccggtggagtccgatggctgagaccaggtctgaggaagtattcc
tgtgaactcacactcgacacaaacacagtgaacagaaagatcaaactgtctgacgacaac
aggaaggcgacacgtgtgaaggaggatcagccatatcctgatcatccagacaggtttgac
cgctggcctcagctgctgtgtagaaatggtctgactggtcgctgttactgggaggtcgag
tggagaggaagagtttatatatcagtgagttacagaggaatcagcaggagaggacgcagt
gaagactgtctgtttggagggaatgatcagtcctggagactggactgctctgatggtcgt
tactctgtctggcacaataagagagaaacatccatctcctcctcctcctcctctgtctct
cacagagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcc
tctgacagactgatccacctccacaccttcaacaccacatgcactgaacctctttatcct
ggctttgggttctggtttgggtcctggtttaggcctggttcctcagtgtctctgtgttct
ctgtag
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integrated database retrieval system
