Siniperca chuatsi (mandarin fish): 122872308
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Entry
122872308 CDS
T08948
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122872308 (gtf3c3)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
122872308 (gtf3c3)
TFIIIC, fungi type
122872308 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_12
TPR_9
TPR_7
ANAPC3
TPR_20
TPR_10
Sel1
HAT_PRP39_C
DUF3855
SHNi-TPR
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
122872308
NCBI-ProteinID:
XP_044044317
LinkDB
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Position
LG24:15714852..15731434
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AA seq
941 aa
AA seq
DB search
MSGFSAELIDYLEGRITFEEFDKRRDERKAKESGVGLLAEDVEDNAQPSTSAQIPGNIEE
GVSPGVQLAFASMLGETPEPLSSEEEEEEDSLSYVDDEDDEDYKVEEEERGKVEVEVEET
KKRQRQGGKGGRGGRRKKKEEEEDLTVGDVFALEMELNRENKKMMKERRHRSKLPRALRG
LMGEANIRYARGEKENAILMCMEIIRQAPLAYEPFSTLAMIYEDDEDMDKALQFGLIAAH
LNPSDCEEWIRLAEMSLEQDNIRQAIVCYTKAIKYDPTNVRYLWERSSLHMRLGEHKHCM
DGYRRILSLLPLEDGEHFMQLSKDMAKSYYESSDLPSALGVIDDALARHPSLVSDDFINM
SAELYIANRQYNKALQVLVQFAGIVLVRSESKSFVVPTQEEKVADKTTEEQEKKNEEGTK
SNTVEEIAVEENGEIKDVQVPDSVPVDLRAKLMVCLIHLHVYTPLEGLVSMLMEQSPEEI
GDLYLDIGEAYLEEGEYMSALPLLSALVISDKYNLAVVWLRHAECLKALGHMEVAAESYT
KVVEMAPQHLEARLSLATLQQQLGRPECALKALESMYDSDTLAQDSSAAQKELKLLLHRS
TLLKTQGQIQDYLDAMITMISMLLKVAMQRAKVCVRSVTVSGENHLRLVKVKDMLPEIAD
HEAAYLDNTGKTNVLSKEDWWQLLVSCVLTLCEVKRYEEAELLVESAMEFFSFYDNKPRR
KELEFFGLSATILDHNYYKAYNYIRLMLMENVDLPQLWNIFNQLTITSEHQRHHRFCLRL
LLKHPDNHALCVLCGHNAMVSGSFKHALGQYVQAFQTHPNNPLHSLCVGLTFFHMASQKY
VAKRHTLVLQGFSFLWRYVELRGECQESMYNLGRALHQMGLTHLAIHYYQKALTLPAQKL
EGIPDDQVDLRREIAFNLSLIYQASGNMEMAHQLINTHCIV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttcagcgctgagctaatagactacctggagggtaggataacttttgaggag
tttgataagcggagagatgagcggaaagccaaggagtcaggggtaggcctattagctgaa
gatgtggaggataatgctcagccctctacctctgcacaaatcccggggaacatcgaggag
ggagtcagcccaggggttcagctggccttcgcctccatgctgggagaaacgccagaacct
ctgtcttcagaagaggaggaagaggaggacagcttgagctatgtcgatgatgaagatgat
gaggattacaaggtggaagaagaggagagaggaaaggtggaggtggaggtggaggagaca
aagaagaggcagaggcaagggggaaaaggagggagaggagggaggagaaagaagaaagag
gaggaagaggatctgacggtgggggacgtgttcgcgctggagatggagctgaaccgagaa
aacaagaagatgatgaaggagcggcgtcatcgcagcaagctgcctcgagctctgagaggc
ttgatgggagaagccaacatccgctacgccagaggagagaaagagaacgccatcttgatg
tgtatggagatcataagacaggctcctctggcttatgagcctttctccacgttggcgatg
atctacgaggatgatgaagacatggacaaagcgctgcagtttggtttgatcgctgcccac
ctgaacccctcagactgtgaggagtggatcagactggcagaaatgtctctggagcaggac
aacatcagacaggccattgtctgctacacaaaggccattaagtacgaccccaccaacgtg
cgctacctgtgggagcgctccagcctccacatgcgtcttggcgagcacaaacattgcatg
gacggctaccgcaggatcctgtcactgctgccactggaggatggagagcacttcatgcag
ctctccaaagacatggccaagagttactatgagagtagtgacttgccctcagctttaggt
gttatagatgatgctctggcacgacacccaagcctggtcagcgatgacttcatcaacatg
tcagctgagctctatatcgccaaccgccagtacaacaaggccctgcaggtcttggtccag
tttgcaggtatagttttggttagatctgaatccaaatcctttgtggtaccaacacaagaa
gagaaagtggcagacaaaacgactgaggagcaggagaagaagaatgaagaaggtacaaag
tcgaacactgtagaggaaatagcagtagaggagaacggtgaaattaaagatgtacaggta
ccagacagtgtcccagtggacctgagggccaagctaatggtctgcctcatacacctgcat
gtctacacacccctggagggactagtgtcaatgctgatggagcagagtccagaggagatt
ggtgacttatacctggatataggtgaagcctacctggaggagggcgagtacatgtctgct
ctgcctctgctgtctgccctcgtcatatccgacaagtacaacctggctgttgtctggctc
cgacacgcagagtgtctgaaggcgctaggccacatggaggtagcagcagaaagctacact
aaggtggtggagatggctccacagcacctggaagcccggctctccttggccaccctgcag
cagcagctgggccgaccggagtgcgccctcaaggccctggagtcaatgtacgacagcgac
acactggcacaggactcgtcggccgcacaaaaggaattaaagctgctgctgcatcgttcc
acactgcttaagactcagggacaaatacaggactacctggatgctatgatcactatgatc
tccatgctacttaaggtggccatgcagcgagctaaggtgtgtgtgcgttctgtaaccgtg
tcaggcgagaatcacctgaggctggtgaaggtcaaagacatgctgccagagattgctgac
catgaagctgcctatctggacaatactggtaaaaccaacgttctgtctaaagaggactgg
tggcagctgctagtgagctgtgtgctgacactgtgtgaggtgaagcgctatgaggaggcc
gagctgctggtggagtcggccatggagttcttctccttctatgacaacaagcccaggagg
aaggagttggagttcttcggtctgtctgccaccatcctcgaccacaactactacaaggcc
tacaactatatcagattgatgctgatggaaaatgtggatctgcctcagctttggaatatt
ttcaaccagctgacgataacctccgagcaccagcgtcaccatcgtttctgtttgcgtctg
ctgttaaaacatcccgacaaccacgccttgtgtgtcctctgcggacacaatgccatggtg
tcagggagcttcaaacatgcactgggtcagtatgttcaggccttccagactcaccccaac
aacccgctccacagcctgtgtgtgggtctcaccttcttccacatggcctctcagaagtat
gtagccaaacgacatacactggtgctgcagggtttctccttcctgtggcggtacgtggag
ctgcgtggagagtgtcaggagagcatgtacaacctgggcagagcgctgcaccagatgggc
ctcacacatttggccatacattactaccagaaggcacttacactgcctgcacagaaactg
gagggtatccctgatgatcaggtagatctgagaagggagattgccttcaacctctccctc
atctaccaggccagcgggaacatggaaatggcccaccagcttatcaacacacactgcatt
gtttga
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