Siniperca chuatsi (mandarin fish): 122872430
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Entry
122872430 CDS
T08948
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04136
Autophagy - other
schu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122872430 (atg13)
04136 Autophagy - other
122872430 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122872430 (atg13)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122872430 (atg13)
Membrane trafficking [BR:
schu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122872430 (atg13)
Atg1 complex
122872430 (atg13)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122872430 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122872430
NCBI-ProteinID:
XP_044044582
LinkDB
All DBs
Position
LG24:complement(9076425..9085587)
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AA seq
542 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICNRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCVEMNEKRCDKDIKVSYTVYN
RLSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTP
VGTVTLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRPANMGQPCNYRAPDE
EDGGPFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDNLQLPLAPGLVTHT
LYASRLSYQPPPLGGAAELCHPAANPNQVLHAGKEGGVVLVPAHPPHGADAHLTVDHAPN
TPGSSGDDDGLSQSGDGRRDEGRRSVSPSDPVESLNAFTRKIGAFVNKPSTQITAASLDL
PFAAFAPRGLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSK
DDLLPMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNMDEFDAFVDM
LQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttgaagactgtccaggtgattgtccaagctcgtcttggagagaagatttgcaatcgc
tcgtcctcatcacctactggctctgattggtttaatttggccattaaagacatcccagag
gtgactcatgaagccaagaaggcactggctggtcaacttccaggcatcggacgctccatg
tgtgttgagatctccctgaagacatcagagggtgactcaatggagttagagacttggtgc
gtggagatgaatgaaaagaggtgtgataaggacatcaaggtgtcgtatacagtctacaat
cgtctgtctgtccttctgaagtctctgctggccatcaccagagtaacacccgcctataaa
ctgtcgagaaagcagggacacgactatgtcatcttatacaggatttactttggggaagtc
cagctgggtggattaggagaaggttttcagacggttcgtgtcggtgttgttggcactccc
gttggcacagtcacgctttcatgtgcttaccgcaccaacctggcattcatgtccaacaga
cagtttgagcgctcggctcctatcatggggatcattgtggatcactttgtggatcctccc
tgcagcagccagcgtcctgcaaacatgggacagccctgcaactacagagctccagatgag
gaggacggaggaccgtttgcaggggttcaggattcacaggaggtctgcaccacctccttc
tccacctcccctccctctcagtgtgtgtgtacactgagtccctcgccctctaaactgtct
aagcccctccctctggacaatctgcagcttccattggctcctggacttgtcactcacact
ctgtatgcttccaggttatcataccagcctccacctctaggaggagctgctgagctgtgt
caccctgctgccaatccaaaccaggtgttgcatgctgggaaggagggcggggttgtgttg
gttcctgcccaccctcctcatggggctgatgcccatctgacagtagatcacgcccccaac
acacctggcagcagcggtgacgacgacggcctgtcgcagagtggagacggaaggagggat
gaaggcaggaggagtgtttctccctctgaccctgtggagtctctcaatgcattcacgagg
aaaatcggagccttcgtcaataaacccagcacacagataacagcagccagtctggacctg
ccatttgctgcatttgctcctcgaggcctggactcagaggagaatgatcccatggtgcag
cctccagactctcctccttgcccatcacccctgcaggccagcctccattctcagggctca
gagggatcggggcagcaggatgactttgtcatggtcgactttcgtccagccttctctaaa
gatgacttgctgccgatggatctgggcactttctacagagagtttcaaaaccctcctcag
ctggccagcctctcactacacatcagctcccagtcgatggccgatgacctggactcactg
ccagagaaactggccgtttatgagaaaaacatggacgagtttgacgcttttgtggacatg
ctccaatag
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integrated database retrieval system
