Siniperca chuatsi (mandarin fish): 122872437
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Entry
122872437 CDS
T08948
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122872437
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122872437
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122872437
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122872437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_GCN1
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_MROH2B_C
Adaptin_N
Sec7-like_HUS
VPS15-like_hel
Cnd1
Ltn1_1st
HEAT_DAAF5
HEAT_ULK4
KH_DEAH11_1st
Paxt-1_C
MMS19_C
Motif
Other DBs
NCBI-GeneID:
122872437
NCBI-ProteinID:
XP_044044597
LinkDB
All DBs
Position
LG24:complement(2543221..2607557)
Genome browser
AA seq
1614 aa
AA seq
DB search
MEEEVSMEYLLEQVMQKDLGKRLQVGQEVIDLILGEERSPQLEQDQTMLDRMVEAVASSW
VNASNFKVVLLGMDILSALVSRLQEKFRTQVGTVLPSLIDRLGDAKDQVRDQDQALLLKI
MDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPVS
DKNFEDDDSVDGGRSSSSSKGASLSGRKPVSMGSFRRPASASSTKSAGRDGSSAGAVDEE
DFIQAFEDVPTVQIFSNREVEEAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAAEFD
GFPQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSLVLGSRFDHAAEAIMPILLNLVPN
TAKVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTSSL
ERHGAVLTETIKKGIHDADAEARSVARKCYWCFHGHFRREAEQLFQGLESSYQKALQAHL
RSGDSQMSLPASDRSSSSSQESLNRPQSVKHTFGSSTTRSKAAHPRTPAAASSPGSLQRS
RSDVDVNAAATATARTRMPAVPSAVPSSASPFSSASALPPGSYASLGRVRTSRTSSGNGP
SVTDSRGRSRGKVVSQSQPSSRSGSPGRLLSSTYGRIPRPTMGTAAAAANSTSSNLTDKS
RPRAHRSHGCSRETSPNRSGTARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLATRR
HSRSTSALSSAECYSDRLSHQARISASVNAMRILNTGTDVEAAVADALLLGDSRSKRRPV
RRRFESPGIYSDDDANSDASSACSDLSYSSRNGGMAPHYLRQTEDVAEVLNHCASANWSE
RKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHRED
LQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPN
LKVKVAILRYIEALARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWAGEDF
SGRPSTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHN
HLRNASANSGIGMASPSNTSGRTPPRQPGSRSSPLTSPTNCSHGGLSPSRLWGWSADGLS
KFPPPPFPSPLPPPTAHSSLKAMQRAYSPSMLEYDSENLNSEEIYSSLRGVTEAIQNFSF
RSQEDLMEPLRRDGKRDGMSGVGASSDGDMVGGGRTALDNKTSLLNTPSPRSFAGPRFRD
YNPYNYTDSISTLDKAALKEALYEDAVERDGCRQECGENKIMNPKSFPAGPAEQLELVGE
LLKQFSQGQAGERGPEERRGTLLELLKVAREDSVVVWEEHFKTILLLLLETLGDKDHTIR
ALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDTHKEVVRAAEEAASTLAGSIHPEQC
IKVLCPIVQTADYPINLAAIKMQTRATERITKEPLHQLLSDIIPGLLQGYDNTESSVRKA
SVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggtgagcatggagtatttgctggagcaggtgatgcagaaggacctgggg
aagaggctccaggtgggccaggaggttatagacctcatcctgggagaggagaggtccccc
cagctggagcaggaccagaccatgctggacaggatggtggaagcagtggccagctcctgg
gtcaacgccagcaacttcaaggtggttttgctggggatggacattctgtcagctctggtc
agcagactgcaggagaaattcaggactcaggttggaacagttttgccgagcctgatagat
cggctaggagacgccaaggaccaagttcgagaccaggaccaagcacttctactgaagatt
atggaccaggctgcaaacccacagtatgtgtgggagcgaatgatgggaggcttcaagcat
aagaacaacaggaccagagaaggactctgcctttgtctcatctcaaccctaaatgtgttt
ggatctcagagtctgacgctcagtaaaatcgttcctcacatctgtaacctcctcggagat
cccacaagtcaggtgcgtgatggagccatgaactgccttgtggagatctaccgccacgtc
ggagaacgagtgagaatggacctgggaaagaagggtctacctcagtcacggttgaacgtc
atcttcagtaaatttgacgaagttcaaaggtcagggaacatggtcctgtcacctgtgtca
gacaaaaactttgaggacgatgactcggtggacggcggccgctcctcgtcctcgtccaaa
ggagcctcgctgtccgggaggaagccggtgagcatgggttcatttcggcgccctgcctcc
gcctccagcaccaagtctgcagggagggacgggtcgagtgctggagctgtggatgaggag
gacttcatccaagcctttgaggatgttcccacagtgcagatcttctctaatagggaggtg
gaggaggccatgacgaagattcgagacgtgctgtcagacgataagagggactgggagctc
agagtggcagctctgaagaaggtgcgctcgctgctcctggccggcgcagcagagttcgat
gggtttccgcagcagctgcggctcatggaggcggcgttcaaactgtctgccaaggacctc
cgctctcaggtggtgagggaggcctgcatcacgctgggccacctgtcgctagtgctcggc
agccggttcgaccacgcggcagaggccatcatgccgattctcctcaacctggtccccaac
actgccaaagtcatggccacctccggcatggccgccatccgcctcatcctcagacacaca
cattacccacgtctcatccccatcatcaccagcaactgtacctccaaatctgtggctgtc
agaaggcgctgctacgagttcctggacctgctgctgcaggaatggcagacgagctctctg
gagagacatggagcagttttaactgagactataaagaaagggatccatgatgcagacgcc
gaggctcgctctgtggccagaaagtgttactggtgttttcacgggcacttccgtcgggag
gcggagcagctgttccagggcctggagtcgtcctatcagaaagctctgcaggctcacctg
aggagcggagacagtcagatgtcgctgcccgcttcggatcgctcgtcctcgtcctcccag
gagagcctcaatcgaccacagtctgtaaaacacacctttggaagcagcacaacaagatcc
aaagctgcccaccccaggacgcctgctgcagcctcctctccaggctccctccagcgctct
cgcagcgacgtggacgtcaacgcggcggccaccgccaccgcccgtaccaggatgcccgcc
gtgccctctgccgtgccgtcatcggcttcgcccttcagctcagcctcggcacttccccct
ggatcctacgcttcactgggccgagtacgaaccagcagaacgagttcaggaaacggtccg
tctgtgacagacagccggggaaggagtcgagggaaagtcgtctcacagtctcaacccagt
agtaggtcaggctctcccggccgactgctgagctccacctatggcaggatcccgaggccg
acgatgggcactgccgccgccgccgccaacagcacctccagcaacctgaccgacaagagc
cggccccgagctcaccgcagccacggctgcagccgagagaccagccccaacagatcgggc
acggcccggagccgaatcccccggccgagcatgagtcagggctgcagccgcgaaaccagt
cgcgagagcagccgcgacaccagccccgccaggggtttctcccccctggcgactcgtcgt
cactcccgttcaaccagtgccctgtcctctgcagagtgctactcagaccggctgtcccat
caggctcggatctcggcctccgtcaacgccatgagaatcctcaacaccggcaccgacgtc
gaggctgccgttgcggatgctctgctcttgggagactcgaggagtaagcggaggccggtg
aggcggcgtttcgagtcaccaggaatatactcggatgacgacgccaacagtgacgcctcc
agcgcctgctccgatctctcgtacagctcgcgcaacggcggcatggctccacactacctg
cgccagacagaagacgtggccgaggtgctgaaccactgcgccagcgccaactggtctgag
agaaaggaggggctgctgggactgcagaacctgctcaagagccagaggatgctcagtcgt
gtggagctgaagaggctttgtgagatcttcaccaggatgtttgcagaccctcacagcaag
agagtcttcagcatgttcctggagactctggtggacttcatcacgctgcacagggaggac
ctgcaggactggctgtttgttctgctcactcagctgctgaagaagatgggtgccgacctg
ctgggctccgtccaggccaaagtccagaaggccctggacgtcaccagagagtccttcccg
tatgagcagcagttcaacatcctgatgcgtttcatcgtggatcagacgcagacgcccaac
ctgaaggtgaaggtggccatcctgcgctacatagaggcactcgcccgccagatggacccg
gccgacttcgtcaactccagcgagacgcgccttgcagtctcgcgcatcatcacctggacc
accgagcctaagagctccgacgtgcgcaagacccttcataactgggcaggggaggatttc
tcaggccgacccagcaccgtggcctctctgcctggagagggcaacctggaggagaggtgc
aagcaggcggcccaggtggtgctaatcgccctgtttgagctgaacacaccggagttcacc
atgctgctgggcgctctgcccaaaaccttccaggacgggaccaccaagctgctgcacaac
cacctgaggaacgccagcgccaacagcggcatcggcatggcgtctcccagtaacacttcg
ggtcggacgcctccacgccagccgggcagccgcagcagcccgcttacctcacccaccaac
tgctcccatggggggctttctcccagtcggctgtggggttggagcgcagacgggctctcc
aagttccctcctccacccttcccctcccctcttcctccacccactgcccactcttccctg
aaggcaatgcagcgagcttactcacccagcatgctggagtacgacagtgagaacctgaac
tcggaggagatctacagctctctgcgcggcgtcaccgaggccatccagaacttcagcttc
cgcagccaagaagacctgatggagccgctgagacgagacggcaagagggacggcatgtcc
ggagtcggggcgtcctcagacggtgacatggtggggggaggacgcacggccttggacaac
aagacgtcgctgctgaacacgccttcgccgcgttccttcgccggcccacgcttcagagac
tacaacccgtacaactacaccgacagcatcagcacactggacaaagctgccctgaaggag
gcgctgtatgaggacgctgtggagcgagacggctgccgacaagaatgtggcgaaaacaag
atcatgaaccccaaaagcttcccagcaggccccgctgagcagctggagctggtcggggaa
ctgctgaagcagttctcccagggccaggcaggggagcggggccccgaggagcgacggggg
accctgctggagctgctgaaagtggcccgagaggacagcgtggtggtgtgggaggaacac
ttcaagaccattctgctgctgctgctcgagacgctgggagacaaagaccacacgatccgg
gcgctggccctgcgagtcctgaaggagatcctgaggaaccagccggcccgcttcaagaac
tacgccgagcttaccatcatgaagacgctggaggctcataaagacacgcacaaggaggtg
gtgcgtgcggcggaggaggcggcctccacgctggcgggctccatccacccagagcagtgc
atcaaggtcctctgtcccatcgtgcagacggcagactaccccatcaacctggccgccatc
aagatgcagacgagggccaccgaacgcatcaccaaggagccgctccatcagctgctgtct
gacatcatacctggactcctgcagggctacgacaacacagagagcagtgtgaggaaggcc
agcgtcttctgcctggtggccatctactccgtgatcggagaggagctgaagccttacctg
gctcagctgaccggcagcaagatgaagctgctcaacctgtacatcaagagggcccagacc
tccaccagcaacagcagcagctcatccgacatctcctcctactaa
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integrated database retrieval system
