Siniperca chuatsi (mandarin fish): 122872738
Help
Entry
122872738 CDS
T08948
Symbol
nptx1l
Name
(RefSeq) neuronal pentraxin 1 like
KO
K25709
neuronal pentraxin
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
122872738 (nptx1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
SlyX
DUF16
Laminin_G_2
DUF6674
HEAT_ULK4
DUF848
NBAS_11th
Hrs_helical
EzrA
Motif
Other DBs
NCBI-GeneID:
122872738
NCBI-ProteinID:
XP_044044716
LinkDB
All DBs
Position
LG3:complement(28802468..28809699)
Genome browser
AA seq
525 aa
AA seq
DB search
MGSGFHLRHSVVALCYCGNCVGARQTVRTTLNKGLASVGRLQQNPLPPSPLPLPGAVNLQ
VRYINCTQPPERTASVDSSVVLKSHRHRTLARTLKPRYVTGAMAGFSWKLFLLSCLVVVE
SAAQDFGQTQFICTSVPKDMDLCTATMQNSGPAEDLKTTVMQLRETVLQQKETIMNQKET
IRELTSKLSRCESQSLPAAAGPGGRRPGSKNTMGDVSRGTTDTLAQLGQTLQTLKQRLEN
LEQYSRGNNTVQANSLKDLLQNKIDDMEKQVLSRVNTLEETKPSSRNDTEQRNRVESTLT
SLHHRITDLEKGKDTRPADKFQLTFPLRTNYMYAKAKRSLPEMYSFSVCLWIKSNASPGV
GTPFSYAVPGQANELVLIEWGNNPMEILINDKVAKLPFLINDGKWHHLCITWTTRDGMWE
AFQDGVMRGNGENLAPYHPIKPEGVLVLGQEQDTLGGGFDATQAFVGELANLNIWNRKLS
TTEIYNLATCNSKALAGNVFSWTESNIEIFGGATKWTFEPCRSLN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggctttcatttaagacacagtgtagtcgctctctgctactgtggaaactgt
gtgggtgctcggcaaacagtgaggacgaccttaaataaggggctggcctctgtaggtcgc
ctacagcagaacccactgcccccctcccccctccccctccctggtgcagtgaatctgcaa
gtccgctatataaactgcacacagccaccagagcgcacagcttcagtggacagctccgtg
gtgctgaaatctcacagacaccgcacactcgctcgtactctgaagccgcgatacgtgact
ggagccatggccggattctcgtggaaactttttctactttcttgcctggttgttgtggag
agcgccgcgcaagacttcggacagacgcagtttatttgcacgtcggtacccaaggatatg
gacttgtgcacggccacgatgcagaacagcgggccggcggaggacctgaagaccacggtc
atgcagctgcgggagaccgtgctgcagcaaaaggagaccattatgaaccaaaaagagaca
atcagggaactaacttccaagttgagccgctgcgagagccagagcctcccggcagcagcg
ggacccggcgggagacggccggggtcgaagaacacgatgggggatgtatcccggggcacc
acggacactctggcccagctgggacagactttacagacgctgaaacagagactggagaat
ctagagcaatacagccgagggaacaacaccgtgcaagcgaacagcctgaaagacctgcta
caaaacaagatagacgatatggagaagcaggttctgtcccgggtcaacacgttagaagag
accaaaccgagctccaggaatgacaccgagcagcggaacagagtggagtccacgctcacc
tctctgcaccatcggattacagacctggagaaaggtaaagacaccaggccagcagataag
ttccagctcaccttccccctgaggacaaactacatgtacgccaaagccaagaggagcctt
cctgagatgtactccttcagcgtgtgtctgtggatcaagtccaacgcctcacccggggtg
gggacacccttctcctacgctgtcccgggtcaggccaacgagctggtgctgattgagtgg
gggaacaaccccatggagattctcatcaatgacaaggttgcaaagctgccgttcctcatc
aatgacggaaaatggcatcacctctgcatcacgtggaccacccgtgacgggatgtgggaa
gccttccaggacggagtgatgcggggaaatggtgaaaatctggcaccataccaccccatc
aaaccagagggagtgctggtcctgggacaagagcaggacacgttgggaggtggctttgat
gcgacacaagctttcgtcggtgagctagcaaacttgaatatctggaataggaaactttct
accaccgagatctacaacttggcgacctgcaacagcaaagcactggctggcaacgtcttc
tcctggacggagagcaacatcgaaatatttggcggagcgaccaaatggaccttcgagcct
tgccgttcgctcaactga
DBGET
integrated database retrieval system