Siniperca chuatsi (mandarin fish): 122872830
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Entry
122872830 CDS
T08948
Name
(RefSeq) integrin alpha-L-like isoform X1
KO
K05718
integrin alpha L
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecule (CAM) interaction
schu04517
IgSF CAM signaling
schu04518
Integrin signaling
schu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122872830
04517 IgSF CAM signaling
122872830
04518 Integrin signaling
122872830
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122872830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122872830
04515 Cell adhesion molecules [BR:
schu04515
]
122872830
04090 CD molecules [BR:
schu04090
]
122872830
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122872830
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin alpha subunits
122872830
CD molecules [BR:
schu04090
]
Proteins
122872830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
FG-GAP_3
vWA_Rv0959
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
122872830
NCBI-ProteinID:
XP_044044762
LinkDB
All DBs
Position
LG3:29151434..29182492
Genome browser
AA seq
1002 aa
AA seq
DB search
MEKMHAKNHIVWLTYTMAVAISVSFTFNIDTTTPHIYTTEQKDFFGNKMLQIMFGKNKGI
LVTASQQLNGSDEICKSDHIQTHQCLIIPDISLTNKTIPIKHIGLSIAEDATHSQFTVCS
PNVVHECYENSYLNNVCYEISSFKPAFQECPKKTVDLVFLFDGSASMTKAEFNKNKDFIV
DIMASLTNTSIKFSAVQFSEDLSKVFDFNDYQEGRALNNLKKEHHMRSLTNTHNALRFVL
EEILENPGAGASPDATKVLVLITNGDPSDTDRDGIIKRYNDKNIICFVIGVRDAELDRVK
AIASEPTDKYVFKIENYDGLTGILENFQKQMCNMEGSKVARSREMPQGGFSAVLSKVCSP
SVVHECYENSYLNSVCYKISDHPQEISSFKPAFQDCTKKTVDLVFLFDGSVSMTEAEFNK
NKDFIVDIMKSLNDTSIKFAAVQFSLDCRKVFDFSDYQAGRALNKLKKEVHMRSLTNTHR
ALKFVLEEILENSGAGASPDATKVLVLITDGDPSDADRDDIIKRYNDKNIIRFVIGVRDA
TLDKFTAIASDPTDKYAFKIENYDGLTGILENFQIKIFNMEGTKVARAEEMTNEMSQSGF
SAVFYKDTLILGSVGSNSWRGSFQDLHEQNKHKKDPHMQMDSYMGYSISVGEKNKAPLYF
TGAPRFEHVGQVILFTQDSKNWTAAQRINGDQTGSYFGAELCSVDVNSDGNTDFLLVGAP
LFYQPQEKRKGQIYVFTLTDEMQLKSELNVTAPSMGRFGTTISSLADLNGDGLRDVAVGA
PFEDDNRGAVYIYLGDRDRGICSYFSQRIMGQKIKPELRFFGQAIDGDIDLGEDGLPDIV
VGSQGMAVVLRSRPVFNVLAHLSFQPENISTDKIVCPGTDENLPLVTLTACFEMVETTKS
KEGAMNSGLNISYTLDVDPMRQTHRAFFSPTDKTARNLTSTLELRDKDTCFNCSIYMPKC
VDDTSSPISIRLNFFQVDSERASAVLNVDSKRQAVAEVPFQN
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatgcatgcaaagaatcacattgtctggctcacatacacgatggctgttgcc
atctctgtatctttcactttcaacattgatacgacaaccccccacatctatacaacagaa
caaaaagatttctttggaaacaagatgcttcaaatcatgtttggcaagaacaaagggata
cttgtcacagcatcccagcagctaaatggatctgatgaaatatgcaaatctgaccatatc
caaacccaccagtgcctcattattccagacatttctctcacaaacaaaacaatacccatc
aagcacattggactgtcgatagctgaagacgccacacactcccaattcactgtttgcagt
ccaaatgtagtccatgaatgttatgagaactcctatctgaacaacgtgtgttacgaaatc
tcctctttcaaacctgctttccaagaatgcccaaaaaagacagtggaccttgtctttcta
tttgatggatcagcgagtatgaccaaagcagagttcaacaaaaataaagatttcatagtg
gatataatggccagccttacaaacacatcaatcaagttttcagcagttcagttctcagaa
gatctaagtaaagtttttgacttcaatgactatcaagagggtagagctctcaacaatctt
aagaaagaacaccatatgaggagtctcaccaacacacacaatgccctcagatttgtgctg
gaagaaatcttagaaaacccaggggcaggtgcctctcctgatgcaactaaagttctggta
ctaatcacaaatggagatcccagtgatacagacagagatgggattattaaaagatataat
gacaaaaacatcatttgctttgtcattggggtcagagatgctgagctggatagagtgaag
gccattgcttcagaacctacagacaaatatgtcttcaaaattgagaactatgacggactc
acaggaatactggaaaactttcagaaacagatgtgtaacatggaaggctccaaagtggct
cggtccagagaaatgcctcagggtggattcagtgctgtcttgagtaaggtttgcagtcca
agtgtagtccatgaatgttacgagaactcctatctgaacagcgtgtgttacaagatctca
gatcatcctcaagaaatctcctctttcaaacctgctttccaagactgcacaaaaaagaca
gtggaccttgtctttctatttgatggatcagtgagtatgaccgaagcagagttcaacaaa
aataaagatttcatagtggatataatgaaaagccttaacgacacgtcaatcaagtttgca
gcagttcagttctccttagactgcaggaaagtttttgacttcagtgactatcaagctggt
agagcgctcaataaacttaagaaagaagtccatatgaggagtctcaccaacacacacaga
gccctcaaatttgtgttggaagaaatcttagaaaactcaggtgcaggtgcctctcctgat
gcaactaaagttctggtactaatcacagatggagatcccagtgatgcagacagagatgat
attattaaaagatataatgacaaaaacatcattcgctttgtcattggggtcagagatgct
acattggataaatttacagccattgcttcagatccaacagacaaatatgccttcaaaatt
gagaactatgacggactcacaggaatactggaaaactttcaaataaagatctttaacatg
gaaggtaccaaagtggctcgggcagaagaaatgactaatgaaatgtctcagagtggattc
agtgctgtcttctacaaggataccttgatcctgggttcagtgggatcaaacagctggcgt
ggttctttccaagaccttcatgaacaaaacaaacacaaaaaagatccacacatgcagatg
gactcctacatgggatactccatttctgttggagagaagaataaagctcctctgtatttc
acgggtgcaccaagatttgagcatgtgggacaggtcatacttttcacacaagattctaag
aactggaccgcagcccaaagaataaatggggatcagactggttcctactttggtgccgag
ctgtgctcagtagatgtcaactcagatggcaacactgacttcctgctggtaggagctcca
ctgttttaccagcctcaggagaagagaaaaggacagatctacgtctttacactgactgat
gagatgcaactgaaaagtgaactgaatgtgactgcaccatctatggggagatttggcacc
accatatccagtcttgcagatctgaatggagatggactccgagacgtcgctgttggagcc
ccctttgaggatgataacaggggggctgtgtacatctaccttggtgacagagacagaggg
atatgcagctatttcagccagagaatcatgggacagaaaataaaacctgagctgagattc
tttggacaggccattgatggggacatcgacctcggagaggacggactcccagatattgtg
gtcggatcacagggcatggctgttgtcttgaggtccaggccagtctttaatgtcttggct
catctgtcttttcaacctgagaacataagcactgataaaattgtctgcccgggcacagat
gaaaatttaccattggttaccttaacagcctgctttgaaatggtagaaacaacaaagagc
aaagaaggggcaatgaactcaggactaaacatctcgtacacgctcgacgtggatccgatg
agacaaacacatcgagctttcttcagtccaactgataagacagctaggaatcttacttct
accttagagctgagggataaagacacctgcttcaactgctccatctacatgccaaaatgt
gtggatgacacatcatcaccgatcagcatcagactaaacttcttccaagttgacagtgag
agagcgagtgccgtcctgaacgtggacagcaaaaggcaggctgttgctgaggttcccttt
cagaactga
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