Siniperca chuatsi (mandarin fish): 122872852
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Entry
122872852 CDS
T08948
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122872852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122872852
03036 Chromosome and associated proteins [BR:
schu03036
]
122872852
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122872852
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122872852
Chromatin remodeling factors
BAF complex
122872852
PBAF complex
122872852
GBAF(ncBAF) complex
122872852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122872852
NCBI-ProteinID:
XP_044044801
LinkDB
All DBs
Position
LG3:18037650..18059957
Genome browser
AA seq
1675 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQAGPS
GYGPDNMHPLHKPMESMHEKSMSEESRFSQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPSSASAPLDGPSGDQHTLGPNNRSVPP
GSSGPGPSPGPSLGSSVTSLGSGLESGGPTGPVGPGGPGGPTPFNQNQLHQLRAQIMAYK
MLARGQPLPDHLQMAVQGKRPMPGMQQPQPMPSLAPGAGGGPGGGPAGPGPGPGPMGSGY
SRVHGMIGPNMPPPGPSGTPAGMQGQNPNGPPKSWPEGPMVNAAAPSNAPQKLIPPQPTG
RPSPAPPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVDILQE
REYRLQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTA
LETALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEY
HRSITGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR
LAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLEIAEGQTPALGPDGEPLDE
TSQMSDLPVKVIHVDSGNILTGLDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEE
EEEEPQPSSALVEEKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYS
VAHAVTEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALI
TYLMENKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKF
NVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTP
LQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLR
PFLLRRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTK
TLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLR
ATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFL
LSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEK
ILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRMNEEDE
VPDDETVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVE
RLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEVEEEVRHKKTTRKRKR
DRDLDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIKY
KDSTSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVMLL
FQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESDGEESEEEEEEPEEGSESESRS
VKVKIRLGRKDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEEHSPSATDEES
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgccagatccccccatgggaggcacccctcgcccaggtccttcccctggtccg
ggtccctctcctggggctatgctgggccccagccctggaccctctccaggctcctctcac
agtatgatgggccccagccctggccctccatcctctggacactcccaggcaggaccttct
ggatatggcccggacaacatgcaccctctgcacaaacccatggagagcatgcatgagaag
agcatgagtgaggagagccgcttcagtcagatgaagggactgtctatgagacagggtggg
cacagtggtatgggccccccacccagtcctctagaccaacactcgcaaggataccactct
ccattaggtggctctgaccactccagccctgtcccttcaaatggtcctccctctggacct
cttatgccatcatcctcttcttcctcctcctctggtggtcctagctctgcctctgcacct
ttagatggccccagtggagatcaacacactctgggtcccaataaccggtctgtccctcca
ggtagctccggcccaggccccagtcctggacccagtcttggctccagtgtcaccagcctt
ggatctggccttgaatctggaggccctacaggtcctgttggtcctggtggccctggtggc
cctactcccttcaaccagaaccagcttcaccaactcagagcccagatcatggcttataag
atgctggcccggggacagccccttccagaccacctccagatggctgtccaggggaagagg
ccaatgcctgggatgcagcagccgcagcccatgcccagcctagctcctggagctggaggc
gggccaggaggtggaccagcaggaccaggaccagggcctgggccaatgggctcaggctac
agtcgagttcacggaatgataggtcccaacatgcctcctccaggcccatcgggtactcca
gctgggatgcaggggcaaaacccaaacggacctcccaagtcctggcctgaaggccccatg
gttaatgcagcagccccctccaacgcaccccaaaagctgattccccctcagcccactggc
cggccttctcctgcccccccttcggttcccccagctgcctcaccagtaatgcctccacag
acccagtcccccggccagccggcacagcctactcccatgatgccttaccacgccaagcag
aaccgaattacccccattcagaaaccttgtggcctcgacccagtggatatactgcaggaa
agggagtacaggttacaggctcgtatcactcatcgtattgctgaactggagaacctgccg
ggttctctggctggtgatttacggaccaaagctactatagagctcaaagccctccgactg
ctgaacttccagagacagctgcgtcaagaggtggtggtgtgtatgcgccgtgacacagca
ctggagaccgcccttgacgccaaggcctacaagcgaagcaaacgtcagtctctgcgggag
gcccgcatcacagagaaactggagaaacaacagaagattgagcaagagcgcaaacgcagg
cagaaacatcaggagtacctcaacagcatcctgcagcatgccaaagacttcaaagagtac
caccgttccatcacaggcaaaatgcagaaactgaccaaagctgtggccacctatcatgcc
aacactgaacgggagcagaagaaagagaatgagcgcattgagaaagagaggatgaggagg
cttatggctgaggatgaggagggctatcgtaaactgattgaccagaagaaggacaagcgt
ctggcgtacctgctgcagcaaactgacgagtatgtcgccaacctcaccgagctggtcaga
gctcacaaagctgcgcaggccctcaaggagaagaagaagaaaaagaagaaaaagaagaag
ttggagattgctgagggtcagactcctgccttgggtccggatggagagcctctggatgag
acgagtcagatgagtgacctgcctgtgaaggtcatccatgtagacagtgggaacatcctg
acaggattggacgcacctaaagctggacagctggagacctggctggagatgaaccctggt
tatgaggtggctccccgctcagacagtgaagacagtgaggaggaggaagaggaggaggag
gaagaggaggagcctcagccatcatctgctctggtggaggaaaagaagaagattacagat
cctgacagtgaagatgtgtcagaggtggatgtccgacacatcatcgaaaatgctaaacag
gatgtggatgacgaatatagcggtgcagcattcgcccgtgggctccagtcttactattct
gtggctcacgctgtcacagagaaggtggagaaacagtccagtttgttaataaatggacaa
ctcaaacagtatcagattaaaggtctggagtggctggtttccctctacaacaataacctc
aatgggatcctggcagatgagatgggtctgggaaaaaccatccagactatcgccctcatc
acgtacctcatggagaacaaacggctcaacggaccctacctcatcattgtacccctctca
actctttctaactgggtgtacgagttcgacaagtgggcaccgacggtcgtgaaagtgtcc
tacaaggggtctcctgctgccagaagagccttcgtcccccaactgcgtagtggcaagttt
aacgttttactcaccacttacgagtacatcatcaaggacaaacaagtactggccaagatt
cgttggaagtacatgatcgtggacgagggccaccgtatgaagaaccaccactgtaagctg
acccaggtcctgaacacccactacctggccccacggcgagtcctgctgacaggaacgccg
ctgcagaacaaactacctgagctctgggcattgctaaacttcctcctgcccaccatcttc
aagagctgcagcaccttcgagcagtggttcaacgcccctttcgccatgactggagagaag
gtggaccttaatgaggaggagaccatcttgattatccgtcgtctccacaaagtgcttcgc
cccttcctgttacgcagattaaagaaggaagtggaggcacagcttccagagaaggtggaa
tacgtgatcaagtgtgacatgtcatctcttcagagggtgctgtacaggcacatgcaggcc
aagggggtcctgctcactgatggatcagagaaagacaagaagggtaaaggaggcacaaag
acactgatgaacaccatcatgcagctgaggaagatctgtaaccacccttacatgttccag
caaatagaggaatccttctctgaacatttaggattctctggtgggatagtccagggtcct
gacttgtatcgggcatcaggaaagtttgaggtgttggatcgaatccttccaaagctgaga
gccacaaaccacaaagtgctgctcttctgtcagatgacctcgctcatgaccatcatggag
gactactttgcatatcgcaacttcaagtatctgcgcctggatggcactacgaaggctgag
gatagaggaatgttactgaaaacattcaatgacccggggtcagagtactttatcttcctc
ctgagcacaagagccggaggccttggcctcaacttgcagtctgctgacactgtagttatt
tttgactctgactggaacccacatcaggacctgcaggctcaggacagagcccaccgtatc
ggtcaacagaacgaggtgcgtgtactgcgtctctgcactgtcaacagtgtggaggagaaa
atcttggccgctgctaagtacaaactgaatgtggaccagaaggtcatccaggccggcatg
ttcgatcagaagtcttccagccacgagcgcagggccttcctgcaggccatcctggaacac
gaggagcaagacgaggtctggggtcaggaagtgtgtctacgcatgaatgaggaggatgag
gtaccagatgacgagacggtcaaccagatgattgccaggagtgaggaggagttcgatcag
tttatgcgtatggacctagaccggcgtcgtgaggaggcccgtaacccacggcgaaaacct
cgtctgatggaggaggacgagctgcccacttggatcatgaaggacgacgctgaggttgaa
cggttgacctgcgaggaggaggaggagaaaatgtttggacgaggttctcggcagcgaaag
gaggtggactacagcgattcactgaccgagaagcagtggctcaaggccatcgaggagggc
acactggaggaggtggaggaagaggtacgtcacaaaaagacaacccgcaagaggaagcgg
gaccgcgacctggatctccctggtccctcctcttcctccgggggacgaggacgaggggac
aaagatgaagatgggaagaggcagaggaagaggggacgaccgcctgctgagaaactctcc
cccaacccccccgccctcacaaagaagatgaagaagatcgtggacgctgtcatcaaatat
aaagacagcaccagtgggcgtcagctgagcgaggtgttcatccagctgccgtctcgaaaa
gagctgccagagtactacgaactgatccgcaagcctgtggacttcaggaagatcaaggag
aggattcgaggtcatcgctaccgcagtctgggtgacctggagagagacgtcatgctgctt
tttcaaaatgctcagaccttcaacctggagggatcactgatatatgaagactccattgtc
ctccaatcagtttttaccagtttgaggcaaaagatcgagaaggaggaggaaagtgacgga
gaggagagtgaggaagaggaagaggagccagaggaaggatcagagtctgaatctcgctcg
gtgaaagtgaagatccgtctgggaaggaaggataaaggtggagatcgagggaagggacgc
agcagacgaacaggacgcaccagagccaaacctgttgttagtgatgacgactctgaggat
gagcaggaagaggagcactcccccagtgccactgatgaggagtcctga
DBGET
integrated database retrieval system
