Siniperca chuatsi (mandarin fish): 122872859
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Entry
122872859 CDS
T08948
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
schu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
schu01100
Metabolic pathways
Module
schu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122872859 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
122872859 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122872859 (xylt1)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
122872859 (xylt1)
Glycosyltransferases [BR:
schu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
122872859 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
122872859
NCBI-ProteinID:
XP_044044814
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All DBs
Position
LG3:25288294..25365839
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AA seq
944 aa
AA seq
DB search
MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDRENGGSNVREKRDRVAG
NKAAGSDYFQHGVQQHHPPPGKGTSRHIQQPDGYYSHRPKEKSRVDSNNENSVPKDFENI
DNSNFGARSQPHRQSVGATSSKQQREHLQEKAHAQQQSWRDSSPSLGRSSNEVLPVGHQP
LAVGNNASYPGGEGVAGVSRQHYRASQAQQAQSQHRHQHPHRRQATAAPLEVTYDQPPKC
EISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCPLEGKANANVQWDEDS
AESFPSKPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVYALAAQ
YPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRTNNQLVA
FLSKYRDMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIPEGISVDGGSDWFL
LNRMFIEYVINSKDDLVTNMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNR
KLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDAYLF
GPFPQGTPSLNSYWESVYDEPDGVASLSDTQLTYYHSFSRLGLARAAASLQGNPKDHSCR
YFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETMETWVAPKKNFKLTTPPSNTFS
RLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQKWSKGPNVTVTVVWIDPTNVIAATY
DILIDASAEYTHYRPPLNQPLRPGVWSVRILHHWSPVAEMHFLIAPLAYNKHQPIRQEDT
LKLHNGPAKNSYMEQSFHGLNPVLNIPVSLGYVEQAKRNAALTGPELERWLDSLVGELWE
AADVCAVGPTACPVMQACPKNPWSSLSPDPKSHLGAPHANGRIR
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggcttgtgtgctcgcaggttggcccgccggtcgcggtccgccctgatagct
gccctcacggtgctgctggtgcagacgctgattgtgtggaacttcagcagcctcgactcc
ggcgaagacagggagaacggaggctccaacgtgcgggagaagagggaccgggtcgcgggc
aacaaagccgccggcagcgactatttccagcacggggtccagcagcatcatcctccgccc
gggaaggggacgtctcgccacatacagcagccggatggatattactcccacaggccgaag
gagaaaagtagagtggacagcaacaacgagaactctgtgcccaaagactttgagaacata
gacaatagtaactttggcgcgcgctcacagccacaccggcagtctgtaggggccaccagc
agcaagcagcagcgggagcatctgcaggagaaggcccatgcccagcagcagtcctggcgg
gacagctccccgagtctgggtcgcagctcaaacgaagtgctgcctgtaggccaccagccg
ctggcggtcggcaacaatgcctcctacccaggtggtgagggcgtcgcaggagtgtcgcgg
caacactaccgtgcctcgcaggcccagcaggcccagtcgcagcacagacatcagcacccc
cacaggaggcaggcgactgcagccccgctggaggtgacctacgaccagccacccaagtgc
gagatcagtgggaaggaagccatttcagctctatccagagccaagagtaaggagtgccgg
caacagatcgctgaggtgtactgcagacacaaggaagggcagttaatgcctgagaaggtc
actcgctactgccctcttgagggtaaagccaatgctaatgtccagtgggatgaggactct
gctgagagctttccatcaaaaccagtcagaatagcgtttgtcctggtggtccatggacgg
gcctctcgccagtttcaacgcctcttcaaagccatctaccacacctcgcactactactat
atacacgttgatcagcgctctaactacctgcacaggcaggtgtatgccttggctgcccag
tatccgaatgtgagggtgacaccctggcgcatggccaccatctggggtggtgccagtctg
ctgaccatgtatcttcgcagcatggctgacctgctggccatgagggactggagctgggat
ttcttcatcaacctcagcgctgccgactaccccatcaggaccaataaccagttggtggcc
ttcctgtccaaatacagagacatgaacttcatcaagtcccatggcagggacaatgccagg
tttatccgtaagcagggtctggatcgtctgttctatgagtgcgacacccacatgtggagg
ctgggtgaccgtaaaatcccagaaggcatctcagtggacggcgggtccgactggttcctt
ctcaaccgcatgttcatcgaatatgtcatcaactccaaggacgacctggtcaccaacatg
aagcgcttctacgcctacactctgctgcctgccgagtcgttcttccacacggtgctggag
aacagtgcccactgtgagagcatggtggataacaacctgcgcatcaccaactggaaccgt
aaactgggctgtaagtgccagtacaagcacatagtcgattggtgtggatgctcccctaat
gacttcaagcctgcagacttccaccgcttccagcaaacggtgcggcccaccttctttgcc
aggaagtttgaagccagcgtgaaccaggagatagtgaaccagctggacgcctacctgttt
ggaccgtttccccagggaacgccgagcctgaactcgtactgggagagtgtgtatgacgag
ccagatggcgtggccagtctgtcggacacgcagctcacatactaccactccttctcacga
ctgggcctggccagagctgccgcctcgctgcaggggaacccaaaggatcacagctgcagg
tacttccccatgggccacccggtgtcagtgcacctctacttccagtcagaccagttccag
ggctacctggtcaagcaccatgccaccaatctggccactagcaagctggagaccatggag
acctgggtggcacccaagaagaacttcaagctaaccacccctcccagcaacacattcagc
aggttgcagttcgcagagatcggtacagagtgggatgccaaagaacgtatgttccgaaac
ttcggcggcctgatgggccccatggacgagacggtgggaatgcagaagtggagtaagggt
cctaatgtcactgtcacagtcgtgtggatcgatcccaccaatgtcatcgcagccacctat
gacattctgatcgacgccagcgccgagtacacccactaccgcccaccgctcaaccagcct
ctgcggcctggtgtgtggagcgtccgcatcctgcaccactggagccctgtggctgagatg
cacttccttattgccccgctggcctataataagcaccaacccatacgacaagaggatact
ctgaagctccacaacgggccagcgaagaacagctacatggagcagagtttccacggcctc
aacccggtgctcaacatccctgtcagcctgggctatgtggagcaggccaagaggaacgcg
gccctgaccggcccggagctcgagcgttggttagacagcctggtgggcgagttgtgggag
gcagccgacgtctgcgccgtgggccctaccgcctgccctgtcatgcaggcctgccccaag
aacccttggagctccctgagcccagaccccaaatcccatctgggagcaccgcacgccaac
gggcgcatcaggtag
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