Siniperca chuatsi (mandarin fish): 122872915
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Entry
122872915 CDS
T08948
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122872915 (rhbdl3)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122872915 (rhbdl3)
Peptidases and inhibitors [BR:
schu01002
]
Serine peptidases
Family S54: Rhomboid family
122872915 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
DUF5580_M
AIF-1
EF-hand_11
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
122872915
NCBI-ProteinID:
XP_044044959
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All DBs
Position
LG3:18744085..18803018
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AA seq
450 aa
AA seq
DB search
MEKSSPRMTGGTRETPVNSSPAVAANAEGEEIEVLESTDVLPVAPEDRTMKQSTGCCLVP
RKHQCLPEPGAVRSNPDCGRDWTYSCQINLHYDPENSGFISTERFRDLLATHGSELDPHK
LEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGSRQLKGCSLRDEVGLGLSQR
LVRHVAYETLPREVDRKWYFDSYTYCPPPWLILAITIAEVAVFMYYGFQLDRLVLQVSSP
SFLKSPLPYHPQLRAQAWRYLSYIFMHTGIEHLSLNMAMQLLVGVPLEMVHGALRIGLVY
VCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWSGMKCQFKLFRMAMALVC
MSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVVVGLTLGVVVLQNYEQRLQEQSLFWIF
FCVYTLFVLCAVFWNIFAYSLLDVRLPPPP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagcagcccgaggatgacgggcggaacccgggagacgccggtgaactcctct
ccggcggtggcggccaacgcggagggcgaggagatcgaggttttggaaagcactgacgtc
ctccccgtggctccagaggacaggacaatgaaacaatccactggctgctgtctggtgccc
cgaaagcatcagtgcctgcccgagcctggagctgtcaggtcaaacccagactgtggtaga
gattggacctactcatgtcagatcaacctccactatgacccagagaattcgggcttcatc
agtacggaacggttcagggacctgctggcgacccacggctccgagcttgacccccacaaa
ctggaagtcctattggcccttgcggatggcaacgccgatggaaagatctgctaccaagac
tttgtcaacctgatgagtaacaagcgctccaacagtttccggagagccattctgcagggg
agccggcagctaaaaggctgcagtctcagagatgaggttggcttggggctgtctcaacgg
ctggtccgacacgtcgcctacgagaccctgccccgcgaggtcgaccgcaagtggtacttt
gacagctatacctactgtccccctccctggctcatcctggctatcaccattgctgaggta
gccgtgttcatgtactatgggttccaactggaccgcttggtcctgcaggtatccagcccg
tccttcctcaagagccccttaccttaccacccccagctacgagcccaggcctggaggtac
ctcagctacatcttcatgcacactgggattgaacacctgagcctgaacatggccatgcag
ctgctggtgggagtcccgctagaaatggtccatggagccctgcggattggacttgtctac
gtgtgtggtgtgctggcagggtctctggcggtgtctgtcaccgatatgacggctccggtg
gtcgggtcatctggtggagtgtacgctctggtctcggcacatttggccaatgtagtaatg
aattggtcgggaatgaagtgtcagtttaagttattccggatggccatggctctggtttgc
atgagtgtagagtttggccgggcggtgtggctgcgattctaccctccggcctttcctccg
tgccccaatcccagctttgtagctcacctgggaggggtggtggttggtctgacgctgggt
gtggtggtcctgcagaattatgagcagcgcctccaggagcagtccctgttttggatcttc
ttttgtgtctacaccctgtttgtgctctgtgctgtcttctggaacatcttcgcctacagc
ttgcttgacgtgcgactgcccccaccaccatga
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