Siniperca chuatsi (mandarin fish): 122872929
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Entry
122872929 CDS
T08948
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122872929 (tmc5)
03037 Cilium and associated proteins [BR:
schu03037
]
122872929 (tmc5)
Transporters [BR:
schu02000
]
Other transporters
Pores ion channels [TC:
1
]
122872929 (tmc5)
Cilium and associated proteins [BR:
schu03037
]
Other cilia and associated proteins
Stereociliary proteins
122872929 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
122872929
NCBI-ProteinID:
XP_044044991
LinkDB
All DBs
Position
LG3:complement(25159201..25170917)
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AA seq
985 aa
AA seq
DB search
MTNYSNGGFFNPAYHDSETLEIDRRSSNKTHHTNPYAREDPAWRGEGADVLYSSTGQTSG
DDAVGRVPWGGWQEESWRGRESIPMGLISTRPGSPPWQHDLNHSTFQIPPDSQYDRSSSI
RLPSSASGNMTMRWRGITMRRMSMFPNADPAHLAFTEDAIRNEMENEEQNLVKELVALST
RDRIRAIRDLPMSFEEKKHIRSQVLAFKSSKQSRQFTCFADCSENVSLSFRRCGYSIRSA
RQTLELWQGIMKEIGGKFGTSVLSYFVFLKWLLMFNIFSFLINFGFITIPLLVNDPSPNI
PQNVSFRGLEILTGAGYFNYTVMYYGSYSNETLHALVEYNMQLAYFFTIAVYMVLCGIAL
IFSMASSFKKNYVIADPASNNAWQLLSSWDFSITNERAVRQRKNNLRVQLKESLSEKAQR
ELLTLSEKLKHFGVYLGSWLLSTSLAAGCGASIYYLCQYEQQRATDAANWSLLQEAETLL
VPFVVSLMNLVVPLFYSLFNKFEHYSSQRKQIYALIVRNVLLKISILAVLCYYWMNVVAK
KFSCWESMVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLEL
IYAQTLAWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRSGRAAQMQTIFIALL
FFPFFVGALSIVAYTAWRLTPSEQCGPFRGLNNTFSVVGVWMHDLEKISGSQWAVWIYQN
VIRSEIFYFLITLIIIVIIYIFWQVTQGRKQLIGQLKQQIINQGKDKSFLLDKLQNLQKS
QPNKKSKQKNPKKHTKRRSDDHSLGGQSNSNAMVQALLARQRLEEEEEEERRCGVPVPSD
ISTSSALVQAMLARQRAYDQDEDLYQMPDDQAMQARQRAHVPERDEYYSTAGFSKNPVNT
SSAVTQSMQARQRAEEAGAEDTDDLPSSVSSVMMQVMQARQRAEEEDRIQWVPDPPQNPA
PTGSSALIQAMLARQQAQNEYDDGY
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattacagcaatggaggattcttcaaccctgcctaccatgacagcgagactctg
gaaattgatagaaggtcttcaaacaaaacccaccacactaacccctatgccagggaagac
ccggcttggcggggtgagggggcagacgtgctttactcgtcaactggtcagaccagcggt
gatgatgctgtgggcagagtaccctgggggggctggcaggaggagagctggagagggaga
gaaagcatccccatgggcctcatctcaacgcgccccgggagtcctccatggcagcatgac
ctcaatcatagtacattccaaatcccccctgactctcagtatgatcgatcgtcttctatt
cgacttccttcttcagcgtcaggtaacatgacaatgagatggaggggaattacaatgaga
aggatgagcatgtttcctaacgctgatcctgcccatctagctttcacagaggatgccatc
aggaacgagatggagaatgaggaacagaacctggtcaaggagcttgttgccctgtcaaca
cgagaccggattcgggccattcgggaccttccaatgagctttgaggagaagaaacatatc
aggagccaagtactggcattcaagtcttctaagcaatctcgccagttcacatgttttgca
gattgctctgagaatgtgtcactgtctttccgtaggtgcggctacagtataaggtcagcc
aggcagaccctggagctgtggcaaggcatcatgaaggagataggtggcaagtttggcacc
agcgtcctctcctatttcgtgttcctcaagtggctgctcatgttcaacattttctccttc
ctcatcaactttggctttatcaccatcccgctgcttgttaacgacccctcacccaacata
cctcagaatgtgagcttcagaggactggagatactgactggagctggttacttcaactac
acagtcatgtactacggtagctacagcaatgaaaccctgcatgctctggtggagtacaac
atgcagttggcctatttcttcaccattgcagtctacatggttctgtgtggaattgcactt
atcttcagcatggccagctcattcaagaaaaactatgtaatagcagacccagcttcaaac
aatgcatggcagcttctgtccagctgggattttagcatcaccaatgagagggcagtgaga
cagcgcaagaacaacctacgtgtccaactcaaggagtctttgtcagagaaggcccagagg
gagctgctaaccctctctgaaaaactgaagcactttggggtttatctgggttcctggctc
ctctccaccagcttggctgctggatgtggagctagcatctactatctctgccaatatgaa
cagcagcgggcaacagatgctgccaactggtctctgcttcaggaggcagagactctcctg
gttccctttgtggtgtctctgatgaacctggttgttccgcttttctactccctcttcaac
aagtttgagcactactccagccagcgcaaacagatctacgctctgatagtcaggaatgtg
ttactcaagatatccattctggctgtcttgtgttattactggatgaatgtggtggctaag
aagttttcgtgttgggagtccatggtgggacaagctttgtaccgtctggtcattgttgat
ttcctttttctgatgttgggatccttctttggagagtttcttagcaatgtgattgggaca
agattactaccacgtctgggggttccagagtttgatgtagccagaaatgtccttgaactc
atctatgcacagactctggcctggattggaatctacttctctcctctgcttcccgccatc
cagattctcaaattttttatcttgttttacttaaagaaggtcagcctgacccagaactgc
cagcctccacggcggtcaggcagagcagctcagatgcaaaccatcttcattgccctcctc
ttcttccctttctttgtgggagctctgtccattgttgcatacactgcctggagactgact
ccctcagagcagtgtggtccttttcggggactcaacaataccttcagtgtggttggagtc
tggatgcatgatctggagaagatctctggttctcaatgggccgtctggatctaccaaaat
gtcatcagaagtgaaatcttttactttcttatcacactcatcatcattgtcattatatac
atcttctggcaagtcactcagggccgcaagcagcttattggtcaactgaaacaacagatt
attaatcaagggaaagacaagtccttcttgttagacaagctccagaacctccaaaaatct
cagcctaataaaaaatccaaacagaagaatccaaaaaagcacaccaaacggcgttcagat
gaccactccttgggcggtcagtccaactcaaacgccatggttcaggctttactcgctcgc
cagcggcttgaagaggaagaggaggaggagagacgctgcggcgtgcccgttccctccgac
atctccacctccagtgctctggttcaggccatgttggcccgtcagagagcttacgaccag
gatgaagatttgtaccagatgcctgatgaccaggccatgcaagccaggcagagggctcat
gttccagagagggatgaatactacagtacagcaggtttttctaaaaaccctgtcaacaca
tccagtgctgtcacacagtccatgcaagccagacaaagagcagaggaggctggagcagag
gatacagatgacctgccgtcttctgtgtcaagtgttatgatgcaagttatgcaagccagg
cagagagcagaggaagaggacaggattcagtgggtacctgaccctccacaaaacccagct
cccacaggctccagcgctctcatacaggccatgttggctcggcagcaggcccagaatgag
tacgatgacggttactga
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