Siniperca chuatsi (mandarin fish): 122872938
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Entry
122872938 CDS
T08948
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122872938 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122872938 (vps35)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
122872938 (vps35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
122872938
NCBI-ProteinID:
XP_044045027
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All DBs
Position
LG1:complement(33682988..33725906)
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AA seq
853 aa
AA seq
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MLKVLKLRACAQRRFCWCVAFNTLEKVVDRRLLTLVLLRLRLIITRRPHRSLVRNRPTTQ
QSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYE
LYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQS
RKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQSEGSEEMTGDINDSIDFV
LLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKYKQIVL
PGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNIIIALI
DRLALFAHREDGPGIPTEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYP
ERVDYVDKVLEGTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPP
LFEYFDYESRKSMSCYVLSNTLDYNTTIVAQEQVDAILNLVSTLIQDQPDQPADDPDPED
FAEEQSLVGRFIHLLHSEDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQLAFRY
KENSSLDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVA
YEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKLLKK
PDQCRAVSICAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIAHQCMDPSLQVQLFIEI
LNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFQNTLEHLRLQRES
PESEGPAYEGLVL
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagtgctaaagctgcgagcatgcgcacagagacgcttctgctggtgcgttgca
ttcaacaccttggaaaaagtggtagatagaaggctcctcacactggttcttctcagactt
cggttgataatcacaagacgaccacacagaagcctcgtccggaataggccaactacacag
cagtctccccaggatgaacaggagaagcttctagatgaagctgtgcaggctgtcaaggtc
cagtcgttccagatgaagcgatgcctggacaagaacaagctgatggatgctctgaagcat
gcctctaacatgctaggtgaactgaggacctccatgctttctccaaagagctactatgag
ctctatatggctatctcagacgaactccactacctagaagtttacctgactgatgagttt
gccaagggtcggaaggtggcagatctctatgagctggtccagtatgcaggcaacatcatc
cccagactgtatctgctaatcacagtgggtgtggtgtacgttcgctccttcccccagtct
cgtaaggacattctgaaggacctggtcgagatgtgtcgtggtgtccagcacccactcagg
ggcctcttcctcagaaactacctgttgcagtgtacccgcaacatactgccagatgacgga
gagcagtcagagggatccgaggagatgaccggtgatatcaatgactccattgactttgtc
cttctgaactttgcggaaatgaataagttatgggttcgaatgcagcatcagggtcacagc
cgagaccgagagaagagagaaaaggaacgacaagaacttaggattctggtgggcaccaac
ctagttcgcctcagccagctggaaggtgtcaatgtggacaagtacaaacagattgttctt
cctggagtgctggagcaggttgtaaactgcagagactcgttggctcaggagtatctaatg
gaatgcattattcaggttttcccagatgagttccaccttcagaccctgaaccctttcctg
cgttcctgtgctgagctccatcaacacgtcaatgtcaagaacatcatcattgccctcatt
gacagacttgctctgtttgctcatcgagaagatggccctggcattccaactgagatcaaa
ctgtttgacatcttctctcagcaagtggccactgtcattcaatctcgccaggacatgcca
tcagaggatgtggtctctcttcaggtctctctcatcaatttggcaatgaaatgctaccct
gaacgtgttgattatgtagataaggtcctggagggcactgtggagatattcaacaagctc
aacttggaacatatagcaaccagcagcgcagtgtcaaaggaacttacccgactgttgaag
atccccgttgatacctacaacaacatcctgacggttctgcagctcaagcacttcccacca
ctcttcgaatattttgactacgagtcacgcaagagcatgagttgctatgtgctgagcaac
acgctggactacaacaccaccattgtggcacaggaacaggtggacgccatcttgaacttg
gtatccacactgatacaggaccagccagaccaaccagctgatgatcctgaccctgaggac
tttgctgaggagcagagccttgtgggtcgtttcatccatctgctccactctgaagatcct
gatcaacagtaccttattctgaacacagcccggaaacactttggtgcgggtggaaaccaa
aggattcgctacacactccctcctctggtgttcgctgcctaccagctggccttcagatac
aaggaaaactcctcactggatgacaagtgggaaaagaagtgccagaagatcttttccttc
gcccatcagaccatcagtgcacttatcaaggctgagcttgctgagctgcctcttcgactc
ttcctgcagggggcactggctgcaggcgagattggctttgagaaccacgagactgtagct
tatgagttcatgtcacaggccttctctctgtatgaggatgagatcagcgactccaaagcc
cagttggcagccatcacactgatcattggtacctttgagcgaatgcgatgtttcagtgag
gaaaaccacgagccgctgaggactcagtgtgcgctggctgcctccaagctgctgaaaaag
cctgaccagtgccgagccgtcagtatctgtgcccatctcttttggtcaggtcgcagtaca
gacaaaaatggtgaagagatccgcgatggtaagcgggtgatggagtgtctaaagaaagcc
ctgaagattgcccaccagtgcatggacccatcgctgcaagtccagcttttcattgaaatc
ctcaacagatatgtctgcttctatgagagggagaacgatgcggtgactgtccaggtatta
aaccagctgatccagaagatcagggaagatcttccaaacctggaggcgagtgaggaaacg
gagcaaatcaacaaacacttccaaaacacactggagcatcttcgcctgcaaagagaatcc
cctgagtctgagggccctgcctatgagggcctggtcctttaa
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