Siniperca chuatsi (mandarin fish): 122873030
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Entry
122873030 CDS
T08948
Name
(RefSeq) protein jagged-1a-like isoform X1
KO
K06052
jagged-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04330
Notch signaling pathway
schu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122873030
04371 Apelin signaling pathway
122873030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
schu04090
]
122873030
CD molecules [BR:
schu04090
]
Proteins
122873030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
DSL
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
122873030
NCBI-ProteinID:
XP_044045230
LinkDB
All DBs
Position
LG3:complement(1599602..1633646)
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AA seq
1252 aa
AA seq
DB search
MSLTRSPVLLPAAFSLQLLLLSARIQVSSASGFFELQILSMQNVNGQLQTGACCDGSRDA
TDQRCAADECDTYFRMCLKEYQLKVSSAGPCSFGIAATPVLGGNTFSLRNAKSDRARIEL
PFSFAWPRSYTLIVEALDFNNDSSSGSVGGEVIEKAVHSGMINPSRQWQSLKHNGPVAQF
HYQVRLSCDEHYYGFGCNKFCRPRDEFFGHYECDHNGNKTCLEGWSGPDCNTAICRQGCS
AEHGICKVPGECKCLYGWQGEYCDQCIPHPGCVHGSCVEPWQCLCDTNYGGQLCDKDLNT
CATLQPCLNGGTCSNTGPDKYHCSCPDGYSGVNCQRADHACLSNPCLNRGSCVETSQGFE
CRCVPGWTGPSCSINVDECLVNPCSHGGTCQDLLNGFKCTCPPQWTGKTCLIDANECDDN
PCVNANSCRNLIGGYFCECLPGWTGQNCDTNINDCRGQCQNGATCKDLVNGYKCVCALGF
GGERCEKDVDECSSGPCLNGGRCHDEVNGFRCLCPPGFSGSRCQLDIDYCLHSPCQNGGR
CFNLVADYVCECPEDYEGKNCSRLKDHCRTTPCKVIDSCTVAVASNSTPGGVRLISSNVC
GPHGRCRSHAGGQFSCECEEGFTGTYCHENINDCESAPCLNGGTCIDKVSQYQCICADGW
DGPTCHNNIDDCSSAPCQNRGVCQDLVNDFYCECNNGWKGKTCHSRESQCDEATCNNGGT
CYDEGDTFKCLCAAGWEGATCNIAKNSSCLPSPCENGGTCVVDGDSFSCVCKEGWEGATC
SHNANDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCSFGSTCVDEI
NGYRCICPPGRTGPRCQDASGRPCVVGGLVALDGSRWDEDCNTCRCHNGRIGCTKLWCGP
KPCSLHSKARGSECPAGQTCVAVRDERCFVKPCPSQGECWSPAHRAPPTARCHTETSCAN
VTFTFNKDIMAKGVTVEQVCRELRSLYVVKNLSSDSSVSVTCEPSLSTNNEIHVAISTED
QRKGMTFVKEITDRIMDLVSKRSGNSTIISAIAEVRIQRRQSHNPNADHLVPLLVSAVIV
VWALAIASMLLWCVRRRRKRSAHTGVSTQAATPPPPPPPSSLAPAAEDNNALHNSVSTAR
EQLNHIKNPIEKNTPNHHHHQHHLLLHHHLCEDKNSVNAKGRKSDTGSQSDEDEMDKRLQ
KARFPRAPPAYSLVDWEEQPPHHTTGKPPHWTSKQDNRQLQSQSVNRMEYIV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcacacggagccccgtcctcctccccgctgccttcagcctgcagctcctgctg
ctctctgcccgcatccaggtttcttcagcttcgggattctttgagcttcagattttgtcg
atgcagaacgttaacgggcagctgcagaccggcgcctgctgcgacgggtcccgggacgcg
acggatcagcgctgcgccgcggacgaatgcgacacctacttccggatgtgtctgaaggag
taccagctgaaggtttcctcggccggaccctgcagcttcggcatcgccgccacgcccgtg
ctcggcgggaataccttttctttgcgcaacgccaagagcgacagagccaggatcgagttg
ccgttcagcttcgcgtggccgaggtcgtacacgttgattgtggaagccttggacttcaac
aacgactcttcctccggcagcgtcggcggggaggtgatcgagaaagccgtccactcgggg
atgatcaacccgagccggcagtggcagagcctgaagcacaacggccccgtggctcagttc
cactaccaggtccgcctcagctgcgacgagcactactacggcttcggctgcaacaagttc
tgccgcccgcgagacgaattcttcggccactatgaatgcgaccacaatggcaacaagacg
tgcctggagggctggtccggtccagactgcaacactgcgatctgcagacagggctgcagt
gcagaacacggaatctgtaaagttcctggagagtgcaagtgtctgtatggctggcagggg
gagtactgcgatcagtgcatccctcatcccggctgtgttcacggcagctgtgtggagccc
tggcagtgtctctgtgacaccaactatggtggacagctgtgtgacaaagatctgaacacg
tgtgcgacgctgcagccgtgtttgaacggaggaacctgcagcaacacgggaccagacaaa
taccactgctcctgtcccgacggctactccggggtcaactgtcagagagcggaccacgcc
tgtctgtccaacccctgtctcaatagaggaagctgtgtggaaaccagtcagggttttgag
tgtcgctgtgtccccggatggaccggaccctcctgctccatcaatgtggacgagtgtctg
gtgaacccctgcagccatgggggaacctgtcaggacctgcttaatggtttcaagtgtacc
tgtcctcctcagtggactggaaagacctgcctcatcgatgccaacgagtgtgacgacaac
ccctgcgtcaacgccaactcctgccgaaacctgattggaggatacttctgcgagtgcctc
ccaggctggacgggccagaactgtgacaccaatatcaacgactgtcgaggccagtgtcag
aacggagctacctgcaaggacctggtgaacggttataagtgtgtgtgtgctctgggcttc
ggcggtgaacgctgtgagaaagacgtggacgagtgctccagcgggccgtgcctcaacggc
ggccgttgccatgacgaagttaacggcttccgctgcctgtgtccacctggtttctccgga
agtcgctgtcagctggatatcgattactgcctccacagtccgtgtcagaacggcggccgg
tgtttcaacctggtggccgactacgtctgcgagtgtcccgaagactacgagggcaagaac
tgctcgcggctgaaggaccactgccgcaccacgccctgcaaagtgattgacagctgcaca
gtggcggtggcgtccaatagcacaccgggcggggtgcgtctgatttcgtccaacgtgtgc
ggcccccacgggcggtgtcggagtcacgccggcggacagttcagctgcgagtgtgaggag
ggattcaccgggacgtactgccacgagaatataaatgactgtgagagcgccccctgtctg
aacggaggaacctgtattgataaagtcagtcagtatcagtgtatctgtgctgacggctgg
gacggccccacctgccacaacaacatcgatgactgcagctctgctccctgtcagaaccgc
ggcgtctgtcaagatctggtcaacgatttctactgtgagtgtaacaacggctggaagggc
aagacctgccactcaagagagagtcagtgtgacgaggcgacctgtaacaacggaggaacc
tgctacgacgaaggcgacaccttcaagtgtctgtgtgctgcaggctgggagggggccacc
tgtaacatcgcgaagaacagcagctgtctgccgagtccctgcgagaacggagggacctgt
gtggtggacggagactcgttcagctgcgtttgtaaggagggctgggagggcgccacctgc
agccacaatgccaacgactgcagtcctcatccctgttataacagtgggacctgcgtcgat
ggagacaactggtatcgatgtgaatgtgctccggggttcgccggccccgactgcaggatc
aacatcaatgagtgccagtcgtcgccctgctccttcggctccacctgtgtggatgaaatc
aacggttaccgctgcatctgtccaccagggagaaccggcccccgctgccaagacgcgtcg
gggaggccctgtgtggtcggagggctggtggctctggatggaagcagatgggacgaagac
tgcaacacctgccgctgtcacaacggcagaatcggctgcacaaagctttggtgcggacct
aaaccttgcagcctccacagtaaggctcgcggctcggagtgtcccgccggtcagacctgc
gtcgccgtccgggacgagcgctgcttcgtcaagccctgccccagccagggggagtgctgg
agccccgcccaccgggccccgcccacagccaggtgtcacacagaaaccagctgtgccaac
gtcaccttcaccttcaacaaggacatcatggcaaagggtgtgacggtggagcaggtttgt
cgcgagctcaggagcctctacgtcgtcaagaatctgtcctccgactcctccgtctccgtg
acctgcgagccgtcgctcagcaccaacaacgagatccacgtagccatctcaacagaggac
cagaggaaaggtatgaccttcgtcaaggaaatcacagacaggatcatggatctggtaagc
aagaggagcggcaacagcaccatcatcagcgccatcgccgaggtccgcatccagagacga
cagagccacaaccccaacgcagaccaccttgtgcccctgctggtttccgcggtgattgtt
gtctgggcgttggcgatcgcctcgatgttgctgtggtgcgtgaggaggcggaggaagcgg
agcgcccacactggggtcagcacacaggcggcgacgccgccgccgccgccgccgccgtcg
tctttggcacctgcagccgaggacaacaacgcgctccacaacagcgtcagcaccgcccgc
gagcagctcaaccacatcaagaatcccattgagaaaaacacaccgaaccaccaccaccat
caacaccacctcctcctccatcaccacctctgcgaggacaagaactctgtcaacgccaag
ggcaggaagtcagacactgggagccaatcagacgaggacgagatggacaagaggctgcag
aaggcgaggttcccccgggcaccaccggcgtactcgctggtagactgggaggaacaaccc
ccccaccatacgacgggcaaacccccacactggactagcaaacaggacaacaggcaactg
cagtcacagagtgtaaacaggatggaatatattgtataa
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