Siniperca chuatsi (mandarin fish): 122873031
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Entry
122873031 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122873031
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122873031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
122873031
NCBI-ProteinID:
XP_044045234
LinkDB
All DBs
Position
LG3:complement(957770..975585)
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AA seq
1166 aa
AA seq
DB search
MCTGVWSLHITPVYVAYWTVIGSKLVVTTSPGVGSAMNQCEETEEGAPPSKTTLCGEHGS
QTRAQSPEQQRPDSAGPGPSCVSIKSHQSMDEPFKFKGRLPSETQVRQQRPDSPGPGPSC
VSMKSDKSMGHPLNFRDGHHSAEERVQQVPGGQSVQQHPTDLDSIFMHLEENVVTFVKNE
LKKFQKVLSPDYPECLGRQSEDEEVVDGEEEEQRTSSREAFLKITLHFLKRMKQEELADR
LQSRTVAAVCRHQLKSHLKQKYQRVFEGIAKAGNPTLLNQIYTEIYITEGGTAEVNDEHE
VRLIETASRKPDSPETTIRCEDIFKPSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAE
DKANQDIHFTFPFTFRELNLLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLD
ECRLPLDFQNNEVLTDVTESTSMDVLLTNLIRGNLLHSARLWITTRPAAANQIPPECVDM
VTEVRGFTDLQKEEYFRKRFSDEEQANRIISHIKTSRSLHIMCHIPVFCWITATVLEDVL
KTSEEEELPKTLTEMYIHFLVVQSKVKIVKYDGGAETDPYWNKKSMKMIVSLGKLAFEQL
QKGNLIFYESDLTECGIDIRAASVYSGVFTQIFREESGLYQDKVFCFIHLSVQEFLAALH
VHLTFINSGVSLLSETTSWWTGLLTSLWSKPFRDKPETNTXFYQSAVDKALQSPNGHLDL
FLRFLLGLSLQTNQTLLRGLVTHSGSISQTNQETVEYIKKKISENLSPERNINLFHCLNE
LNDRSLMEEIQHYLSSGSLSTDKLSPAQWSALGFILLSSEKDLDVFDLMKYSPSEEVLLR
LLPVVKASNKALLGGCNLSERSCNTLSSVLSSQSSSLRELDLSNNDLQDSGLKLLSAGLE
SPHCTLETLRLSGCLITEEGCTSLASALRSNPSHLRELDLSYNHPGDSGVKLLSAGLEDP
HWRLDTLRVEHGGEQRLKPGVRKYACELTLDTNTVHRNLKLSDDNRKVTVVTEKLPYPDH
PERFDSWPQLLCRNGLTGRCYWEVEWEGRAHISVSYRGIRRRGRSVDCRFGRNNQSWTLI
CSDDDGYSVRHSKRTTVLSSSPPPPVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTT
FTEPLYPGFGFWSSLRSGSSVSLCSL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccggagtttggagtcttcacatcacacctgtgtacgttgcatactggactgtg
attggctcgaagctagttgtcacaacatcacctggtgtgggctctgctatgaaccagtgt
gaggagacagaggagggagcccccccctctaaaaccactctgtgtggggaacatggcagc
cagaccagagctcagagcccagagcagcagagaccagactctgctggacctggacccagc
tgtgtgtccatcaagagccaccagtccatggatgaaccttttaagtttaaaggacgactt
ccttcagagactcaggttcgtcagcagagaccagactctcctggacctggacccagctgt
gtgtccatgaagagtgacaagtccatgggtcatcctttaaacttcagagatggacaccac
tctgctgaagaaagagttcagcaggttcctggtggtcagtctgtccagcagcatccaaca
gacctggactccatatttatgcatcttgaggaaaacgttgtcacttttgtgaagaacgag
ctgaaaaagttccagaaggttctgagtccagattacccagaatgcttagggagacagagt
gaggatgaggaggtggtggatggtgaggaggaagagcagaggacgagcagcagagaggca
tttctgaagatcacactgcacttcctgaagagaatgaagcaggaggagctggctgaccgt
ctgcagagcagaactgttgctgcagtttgtcgacatcaactcaaatctcacctgaagcag
aaatatcagcgtgtgtttgaggggattgctaaagcaggaaacccaacccttctgaaccag
atctacacagagatctacatcacagagggaggaactgcagaggtcaatgatgaacatgag
gtcagactgattgaaacagcatccaggaaaccagacagtccagaaacaacaatcaggtgt
gaagatatctttaaaccctcacctggaagagatgaaccaattagaacagtgatgacaaag
ggagtggctggcattgggaaaacagtcttaacgcagaagttcactctggactgggctgaa
gacaaagccaaccaggacatacacttcacatttccattcactttcagagagctgaatctg
ctgaaagagaaaaagtacagcttggtggaacttgttcatcacttctttactgaaaccaaa
gaagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtcttgat
gagtgtcgacttcctctggacttccagaacaatgaggtcctgactgatgttacagagtcc
acctcaatggatgtgctgctgacaaacctcatcagggggaacctgcttcactctgctcgc
ctctggataaccacacgacctgcagcagccaatcagattcctcctgagtgtgttgacatg
gtgacagaggtcagagggttcactgacctacagaaggaggagtacttcaggaagagattc
agtgatgaggagcaggccaacagaatcatctcccacatcaagacatcacgaagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctacagttctggaggatgtgttg
aagaccagtgaagaagaagagctgcccaagaccctgactgagatgtacatccacttcctg
gtggttcagtccaaagtgaagatcgtcaagtatgatgggggggctgagacagatccatac
tggaataaaaagagcatgaagatgattgtgtctctgggaaaattggctttcgagcagctg
cagaaaggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcaga
gcagcctcagtgtactcaggagtgttcacacagatctttagagaggagagtgggctgtac
caggacaaggtgttctgcttcatccatctgagtgttcaggagtttctggctgctcttcat
gtccatctgacattcatcaactctggtgtcagtctgctgtcagaaacaacatcctggtgg
actggacttttgacctccctgtggtctaaaccatttagagacaaacctgaaaccaacaca
nntttctaccagagtgctgtggacaaggccttacagagtccaaatggacacctggacttg
ttcctccgcttcctcctgggtctttctctacagaccaatcagactctcctacgaggccta
gtgacacactcaggaagtatctcacagaccaaccaggaaacagtcgagtacatcaagaag
aagatcagtgagaatctgtctccagagagaaacatcaatttgttccactgtctgaatgaa
ctgaatgatcgttctctaatggaggagatccaacactacttgagttcaggaagtctctcc
acagataaactgtcgcctgctcagtggtcagctctgggcttcatcttactgtcatcagaa
aaagatctggacgtgtttgatctgatgaaatactctccatcagaggaggttcttctgagg
ctgctgccagtggtcaaagcctccaacaaagctctgctgggtggctgtaatctgtcagaa
agaagctgtaacactttgtcctcagttctcagctcccagtcctctagtctgagagagctg
gacctgagtaacaacgacctgcaggattcaggactgaaactgctctctgctggactggag
agtccacactgtaccctggagactctcaggctgtcaggctgtctgatcacagaggaaggc
tgtacttctctggcctcagctctgagatccaacccctcccatctgagagagctggacctg
agctacaatcatccaggagactcaggagtgaagctgctgtctgctggactggaggatcca
cactggagactggacactctcagggtggaacatggtggagagcagaggctgaaacctggt
gtgaggaagtatgcctgtgaactcacactggacacaaacacagtacacagaaacctcaaa
ctgtctgacgacaacaggaaggtgacagtagtgacagagaagctgccatatcctgatcat
ccagagaggtttgacagctggcctcagctgctgtgtagaaatggtctgactggtcgctgt
tactgggaggtcgagtgggaaggaagggctcatatatcagtgagttacagaggaatcaga
aggagaggacgcagtgttgactgcaggtttggacgaaataatcagtcctggactctgata
tgctctgatgatgatggttactctgtcaggcacagtaagagaacaacagtcctctcctcc
tcccctcctcctcctgtctctaacagagtagcagtgtatgtggactgtcctgctggcact
ctctccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccaca
ttcactgaacctctttatcctggctttggtttctggtcgtctctcaggtctggttcctca
gtgtctctgtgttctctgtag
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