Siniperca chuatsi (mandarin fish): 122873039
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Entry
122873039 CDS
T08948
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04260
Cardiac muscle contraction
schu04261
Adrenergic signaling in cardiomyocytes
schu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122873039 (slc8a1a)
04020 Calcium signaling pathway
122873039 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122873039 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
122873039 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122873039 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122873039 (slc8a1a)
Transporters [BR:
schu02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
122873039 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
schu00536
]
Heparan sulfate / Heparin
Others
122873039 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
122873039
NCBI-ProteinID:
XP_044045256
LinkDB
All DBs
Position
LG3:complement(917349..945408)
Genome browser
AA seq
964 aa
AA seq
DB search
MSPARTTSLFSTYQLLFLLTIISIELPYSACSTLTLTSNNTLSNRTKCGGATGCIEGVIL
PVWKPENPAFTDRLARATIYFVGLAYMFLGVSIIADRFMASIEVITSQERQITIKKPNGE
KITTTVRVWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGELGPNTIVGSAAFNMFV
IIGLCVSVIPEGETRKVKHLRVFFVTATWSVFAYTWLYLILAVFSPGVVEIWEGLLTLFF
FPICVGFAYVADRRLLFYKYMYKRYRAGKRKGMIIETEGEPELPSKVDIEMDGKMLNSHG
EETGFDFKELDEEEARREVARILKELKQKHPEKEMEQLMELANYQVLTQQQKSRAFYRCQ
ATRIMTGAGNILKKHAADQAKRATQHDICSEVSLNDFSSKVFFDPGTYQCLENCGSVALN
VVRRGGDLMSTVSVDYRTEDGTANAGSDYQFTEGTIVFKPGETEKEIRIDIIDDDIFEED
EHFLVHLSNVNVISKCDGSDECEANHVDALAGLGLPCTATVTIFDDDHAGIFTFEEPVVT
VSESIGVMEVKVIRTSGARGVVVVPYKTMEGTAKGGGEDFEDTHGVLEFENDDIWKTIAV
RIIDHEEYDKQASFYIELQEPYWNRRRWTGAKRHLDLSGGFVKTDKQLYGKDIYRKVQGR
DHQAPSAIINITEERGEEVLTKKEEEERRIAEMGRPMLGEHVKLEVVIEESYEFKSTVDK
LLKKTNLALVIGTNSWREQFVEAITVSSGDDDDDECGEEKLPSCFDYVMHFLTVFWKLLF
AFVPPTDYWNGWACFVVSISVIGMLTAVIGDLASHFGCTVGLKDSVTAVVFVALGTSVPD
TFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHYSKGQEFRVDPGTLAF
SVTLFTIFAFICIAVLIYRRRPEIGGELGGPRVPKILTTCLFFSLWLMYIVFSSLEAYCH
VKGF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagccaggaccacgtcactgttctccacctatcagctgcttttcttgttgacc
atcatctcaattgaacttccatattctgcatgctctactctgaccctcacgtccaacaac
acactcagcaaccgcaccaaatgtggaggagctaccggctgcattgaaggcgttatcctg
ccagtatggaagccagaaaacccagccttcaccgaccgccttgccagagctaccatttac
tttgtggggctggcgtacatgttcttgggcgtctctataattgctgaccgcttcatggca
tccatcgaggtcatcacctcccaggagagacagatcaccatcaagaaaccgaatggtgag
aagatcaccacgacggtgcgtgtctggaacgagacggtgtccaacctgaccctgatggca
ctgggttcctccgccccagagatcctcctgtcagtcgtggaggtttgtggtcacaacttt
gatgccggtgagctgggccccaacaccattgtaggaagtgccgccttcaacatgtttgtc
atcattggcctttgtgtatctgtcattcctgaaggagagaccagaaaggtgaagcacctc
agggtgttcttcgtcaccgccacctggagtgtctttgcgtacacctggctttacctgatc
ctggccgtcttttctccaggtgttgtagagatatgggaggggcttctcacactcttcttc
tttcccatttgtgttggatttgcttacgtggctgaccgcagacttcttttctacaaatac
atgtacaaacgatacagagcagggaagcggaaaggaatgatcatcgaaacagagggagaa
ccagagcttccctcgaaggtcgacatcgaaatggatgggaaaatgctcaactcccatgga
gaggagacggggtttgattttaaggagctggatgaggaggaggcccgcagagaggtggcc
aggatcctgaaggaacttaaacagaaacatcctgagaaagagatggagcagttgatggag
ttagccaattaccaagttttaacacagcaacagaagagtcgggctttttaccgctgtcag
gcgaccaggatcatgacaggagcaggcaacatcctgaagaagcatgctgctgatcaagcc
aagagagccacccagcacgatatctgctctgaggtttcattgaatgatttttcctccaag
gtgttcttcgaccctggtacctaccagtgtctggagaactgtggcagtgtagcactgaat
gtggtgcgccgtggtggagacctaatgagcacagtctcagtggattacaggactgaagat
ggcaccgcaaacgctggctcagactaccagttcactgaaggaactattgtgtttaaacca
ggtgagaccgaaaaagaaatccggattgacattattgatgatgatatctttgaggaagac
gagcatttcctggttcacctcagcaatgtgaacgtcatttcaaagtgtgatggctcagac
gagtgcgaggcaaatcatgtggacgcccttgcaggtttaggtctgccatgcacggccacc
gtcaccatctttgatgatgaccacgcagggatctttacattcgaggagccagtggtgact
gtgagtgagagcattggggtgatggaggtgaaggtgattcggacctcgggagctcgtggt
gttgtggtagtgccatacaaaaccatggaggggacggctaaaggaggcggggaggacttt
gaggacacacatggagtcctggagtttgagaacgatgatatctggaagaccatagccgtt
agaataattgaccatgaggagtacgataagcaggccagcttctacatagagctgcaggag
ccatattggaacaggaggagatggacaggtgcaaagaggcaccttgacctctctggtgga
ttcgtcaaaacagacaaacagctgtatggcaaagacatctacaggaaggtccagggacga
gaccaccaagccccctccgccatcatcaacatcacagaggagaggggtgaggaggttttg
accaagaaggaggaggaggagaggcggatcgcggagatgggcagaccgatgctgggtgag
cacgtcaaactggaggttgtcatagaggagtcatatgagtttaagagcaccgtggataaa
ctccttaagaagaccaacttggccctggtgatcgggactaacagctggagagagcagttt
gtggaagccatcacagtcagctctggtgatgatgatgacgatgaatgtggcgaggagaag
ctgccctcctgttttgactatgtcatgcacttcctcaccgtcttctggaagcttctgttt
gccttcgttcctcccaccgactactggaacggttgggcctgctttgtcgtctctatctcc
gtcatcggcatgctgacggcggtgattggtgaccttgcgtcacattttgggtgcacagtt
ggcctcaaagactccgtcactgctgtggtgttcgtagctttgggcacatctgtaccagac
acctttgccagtaaggtggcagccacccaggaccaatacgctgacgcctccatcggcaat
gtgacaggaagtaatgctgtcaatgtctttctgggtattggtgtggcctggtccatcgct
gctatctaccactactccaaaggccaggagttcagggttgacccaggcacgctggccttc
tccgtcacactcttcaccatctttgccttcatctgcatagccgtccttatctatcgccgc
cggcccgagattggcggggagctcggtggaccccgagtgcccaagatcctcacaacctgc
ttgttcttcagcctgtggttaatgtacattgtcttctcctcactggaggcctactgccat
gtaaagggcttctaa
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