Siniperca chuatsi (mandarin fish): 122873113
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Entry
122873113 CDS
T08948
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1 isoform X1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122873113 (lrrk1)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122873113 (lrrk1)
Protein kinases [BR:
schu01001
]
Serine/threonine kinases: TKL group
LRRK family
122873113 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
LRR_4
COR-B
Roc
COR-A
Ank_2
Ank
LRR_14
Arf
Ank_4
Ras
Beta-prop_LRRK2
LRR_NXF1-5
Gtr1_RagA
LRR_9
Drf_DAD
Motif
Other DBs
NCBI-GeneID:
122873113
NCBI-ProteinID:
XP_044045392
LinkDB
All DBs
Position
LG1:complement(34248420..34410391)
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AA seq
2030 aa
AA seq
DB search
MSYWTVGLPQDSGDTPSNMEQQSSPGEEMGARASLVEGLGSGSALVHSATLENIQAAYED
GEEEAARELIQQACCVECSAGTPHIDGVRLLCLATQYGDLQSVRYLLKEARITVPQEPSN
SNPAILAAYYGHTSLVKELMNSIPGPCLRRDLLNWMLATSCQHGHLDVVRLLVHGYNADA
KDCAILSDEFAVITGLPLYAAARAGNEEIAHFLLQNGAGFSSYTLMDHPAFSKHLLRLRL
QETSNAEGEEQAVSVYWSGLQLPWLELDWFMDVSSRINHLDLSSNSLAALPSVVPWGLIN
LQTLDLSNNLLKELPAAHNSQEVICSSLQQVNLSQNQLTSLPPGLLHLTHIQRLSVAKNQ
LTVLFDIPTTTNWIGLRKLEELDVSDNCLTSLPTAILRCLKSLSFLNVCRNKLSTFPDPW
ACPLKQCKASSNVIESLPNTISIFWRSQLQEVDFSDNGLKELPSYIFELETLVSLRLCGN
RIATLPAPSKWKCSQLRTLDLSRNQLGKTEEGPKSRRLAFLTTWNRRDPDPVCPIEFPLI
LRDSLEVLFLNDNQLECVPQSVCGLHSLTELYLSNNAGIRELPAELGQLSNLWQLDIENL
NITNVPQEVRKEGPASVLAFLRAHLRKAEPFKLLKMLVIGPPRQGKTALLEALQTGRASP
FTPAECSISTSIWELDKPNGGKNTKDSVAFNVWDIGGQASMSTVNQCFFTDKALYVVIWN
LALGEEAVANLQTWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERLATLRAYILALCRSP
SGARATGYPDITWKHLHEVSCKTLEGLDVLKKLIYQVALSMKDNSSTACGSKLLGRLIPR
SYLTLQEAVIAEKQRRDAEGEVQYLTDAQLDHIIEQNPGSDIRDYEDVQTAISFLMETGT
LLHFPDTSHGLCTLYFLCPVWLSECLERIMHLKSSRSVARNGVIQAEDLRMLLVGTGFTQ
QTEEQYFQFLAKFEIALPVANNSYLLPHLLPPKPAMDIHGFRQQTNNTLQRLVKMSFVPA
GFWERFIARMLISLTEMDLQSFEPKRNTRSQHSRNSVIYSFAGTQQRNRCSTFRVRRSQT
IYWKEGLLVTFDGGYLSVESSDINWKRKKSGGIKIICQSEMRDFSAMAFITDHVNSLIEQ
WFPALTASESDGSLLIEQYAPCPLCASLGQQKQAELLASRSSQVGERGGCGGDDGGGAGI
HYFNMEDCVLAAVEKEHIICPQHPDHPVTLQELVPELFMTDFPARLFLERAQLEYSEEEN
NILGQGGSGTIIYRARYCGQPVAIKRFHFKKCRQQAISNNTDTMVKHLQSADACRSFSEY
RQEASMLHSLQHPCIVSLVGISIHPLCFALQLAPLGSLNTVLEEKRKGSRYMPLGHMLTF
KVAYQIASGLAYLHRKRIIFCDLKSDNILVWSLEVQDPVNIKLSDYGISRQSFHEGALGV
EGTPGYQAPEIRPGIVYDEKVDMFSYGMVLYELLSGQRPALGHHQLQIAKKLSKGIRPVL
GSPEEVQFYCIHSLLTECWDTKPEKRPVAMQCVRQMQEPSFPCLRYVLSCDSHSQLFLSQ
LQGYSAVFWNGDKDDRNYSVVNVEKGQVEVKRMSCPGSRISCQMKMGNTLWMATEEQEVF
IYSLKDMCPLSQPQKQFSCPAIITCLFPVPAREQNLARVFAGMSDGLVAVYSLVEDLPLE
GEAYLCSHTLNKTVFGLKDTDPRQRPYPVRSMALVSSGSQLWFSNGPGVLVIDCLSLQAV
RRLELYSPPSSIISMTTSFSLWGEEAVWTIDDHINTLLLYHAASYQLCAKYCCGDSNPLR
DVFTVQRPAGVSMVTTTDLKNTAQEEKRECINGEVTLIYSEEAGTQIIQHQDSLTDYCSI
SSNYLLEPLGSDTSGLSSLASHSSVPLPAEEETGRYQDQQASINPESDLDSPETVNPTTP
QLRAFTVLPVNGTLWVPRRGGDVMVIEMQSHADQLTGRVIAVLSPPGCFTLGILEEAALV
AKDTVVCAFRKENMEWCLCVWRGWGCHELKVFYQSYEELGRLETSMRKRR
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactggactgttggccttccccaggactctggagacactcccagcaacatggag
caacaaagcagccctggggaggaaatgggagccagggcatcattggtggagggtctgggg
tccggctctgcactggttcattctgccactctggagaacatccaggcagcatatgaagat
ggagaggaggaggctgccagggagctgatccaacaagcctgctgcgtggagtgcagcgcg
ggcacacctcacatcgatggcgtacgtctcctgtgtttggccactcagtatggtgatctg
cagagtgtgcgttacctcctcaaagaagcccgtatcactgtgccccaggagccatccaac
agcaacccagccatcctggcagcatattacggccacaccagcctggtcaaagagctgatg
aattctatacctggtccatgtctgaggagagacttgctgaactggatgctggccacatct
tgccagcacggtcacctggacgtggtccggctgctggtccacggctataatgctgatgcc
aaggactgtgccatcctcagcgatgagtttgctgtcatcactgggctgccgctgtacgct
gctgcgcgagcagggaatgaggagatagctcacttcctgctgcagaatggagcaggattc
tcatcatacaccctgatggaccatccagccttcagcaaacacctcctcaggctcagacta
caagaaacctccaacgcagaaggagaggagcaggctgtcagtgtgtattggagtggtctg
cagctgccctggttggagctggattggttcatggatgtctcctcacgtatcaaccacctg
gatctgtcatccaacagcctggctgctctgccctctgtggtgccctggggtctcatcaac
ctgcagactctagatctttctaataacttgctgaaagagctgccagctgctcacaactcc
caggaggtcatctgctccagtttacagcaggtaaatctttctcagaaccagctcaccagt
ttgccacccgggctactccatctgacccacatccagagactttctgttgccaagaaccag
ctcacagtcctgtttgacatccctaccactactaactggatcggtcttcgtaagctggag
gagctggatgtgtctgataactgtctgaccagtctgcccacggcaatcctgcgctgtttg
aaatctctgagcttcctcaatgtgtgcaggaacaaactgagcaccttccctgacccctgg
gcttgtccactgaagcaatgcaaagcttcctccaatgtgatcgagagtcttccaaacacc
atctccatcttctggaggtctcagctgcaggaggtggacttctctgacaacggcctgaag
gaactgccctcatacatctttgaactggagactctggtctcgttgagattgtgtgggaat
cgcattgcgacactcccagcccccagtaagtggaagtgctctcagcttaggaccctcgac
ctttccaggaaccagctgggcaaaacagaggaggggcccaaatccagaaggctagccttc
ctgactacatggaacaggagggacccagatccagtgtgtcccatagagtttcccctgatt
ctgcgggattcactggaagtgcttttcttgaatgacaaccagctggagtgtgttccccaa
tcagtgtgtggtctgcacagcctcactgagctctacctctccaataatgctggaatccgg
gagcttccagcagagcttggccagctctccaacctgtggcagctggacattgaaaacctc
aacattactaatgtcccccaggaagtaagaaaagaaggtcctgcgtctgtcctggctttc
ctccgggcacaccttcgaaaggcagagccttttaaactgctgaagatgcttgtgattggt
ccaccgaggcaggggaagacggcccttctggaggctctacagactggcagggcatccccc
ttcaccccagcagaatgcagcatctcaacctccatctgggagttggacaaacccaacgga
ggcaaaaacacaaaggactcggtggcgttcaacgtgtgggacatcggtggtcaagccagc
atgtccacagtgaaccagtgtttcttcacagataaggccctgtatgtggtgatctggaac
ctggctctgggagaggaggctgtggccaacctgcagacatggctgcttaacatagaggcg
cgagcgcccaactctgcagtggtggttgtgggaacacatttggatctcatcgacaccaag
tttcgcactgagagactggctacgctgagagcttatattctggctctttgccgatccccg
tcaggggctcgagccaccggctaccctgacatcacctggaaacacctgcatgaagtgtcc
tgtaagaccctggagggtttggatgtgctgaagaagctgatctaccaggtggctctctcc
atgaaagacaacagcagcacagcctgtggcagtaaactgctgggcagactgatccccagg
agctacctgacacttcaggaagcagtgatagcagagaagcagaggcgagatgctgaggga
gaggtccaatacctaactgatgcccagctggaccacatcattgaacagaacccaggaagt
gacatcagagactatgaggacgtgcagactgccatcagcttcctaatggagacggggacc
ctgctgcacttccctgataccagccatggcctgtgtaccctctactttctgtgtcctgta
tggctgtcggaatgcctggagaggatcatgcacctcaagtcctctcgctctgtggccagg
aatggagtgatccaagctgaagacctcaggatgctattggtaggaacagggttcacccag
cagacagaggaacagtatttccagtttctagccaagtttgagattgctctgcctgtggcc
aacaacagctatctgttgccccacctccttccacccaagccagccatggatatccatggc
ttccgccagcagaccaacaacactctgcagcgccttgttaagatgagctttgttcctgct
ggattttgggagcgcttcattgccaggatgcttatcagcctcacagagatggacctgcag
tcatttgagcccaaaagaaacaccaggagccagcacagcaggaactctgtgatctacagc
tttgctggaacccagcagaggaatcgttgcagcaccttcagagtccgacgcagccagacc
atctactggaaggaggggctgctggtcacttttgatggaggttacctcagcgtggagtca
tcagatatcaactggaagaggaaaaagagtggaggcataaagatcatctgccagtcagag
atgagagatttctctgccatggccttcatcacagaccacgtcaactctctgatcgagcag
tggttccctgctttgacggccagtgagagtgatgggagtctcctcatagagcagtatgcc
ccctgtcccctctgtgcctcactgggccaacaaaagcaggccgagctcctagctagccgg
tcgagccaggtcggagagagaggtggatgtggaggagatgatggaggaggtgcagggatt
cattactttaacatggaggactgtgtgctggctgcagtggagaaggagcacataatctgt
cctcagcaccctgaccacccagtcaccctccaggagctggtcccagaactcttcatgact
gacttccctgcacggctctttttggagagggcccagctggagtactctgaggaggagaat
aacatccttggccaaggtggcagtgggaccatcatctaccgagcccgatattgtggccag
ccggttgctatcaaacgtttccacttcaagaagtgtcgacagcaggccatcagcaacaac
acagacaccatggtgaaacacctgcagtctgcagatgcctgtcggagcttctctgaatat
cgccaggaggccagtatgttgcactctctgcagcatccctgcatcgtctctctggtgggc
atcagcatccatccactctgctttgccctgcagttagcccccctgggcagcctcaacact
gttctggaagagaagcgcaaaggctccaggtacatgccgcttggtcacatgctaaccttc
aaagtagcctatcagattgcatcaggactggcataccttcacaggaaaagaatcatcttc
tgtgatctcaaatctgacaacattctggtttggtctctggaggtgcaggatccagtcaac
attaaactgtctgactatggcatttctcgacaatccttccatgagggggcgttgggggtc
gagggcacaccgggttaccaggctcctgagatccgaccaggcatcgtgtatgatgaaaag
gtggacatgttctcctatggtatggtgctgtatgagctgctgtctgggcagaggccagcg
ctgggacaccaccagcttcagatagcaaagaagctctccaaaggcatccggccagtgcta
ggcagtccagaggaggttcagttctactgcatccacagcctgctgactgaatgctgggac
accaagcccgagaagaggccggtggccatgcagtgtgtgaggcagatgcaggagcccagc
ttcccctgcctcaggtatgtattgtcgtgtgacagccactcgcagctgttcctgtcccag
ctgcagggatacagcgctgtgttctggaacggagacaaggacgacaggaactacagtgtg
gtgaatgtggagaagggccaggtggaggtgaagaggatgtcctgtccaggcagcaggatt
agctgtcagatgaagatgggtaacactctgtggatggccactgaggagcaggaggtgttc
atctacagtttgaaggacatgtgtccactcagtcaaccccagaaacagttctcctgtcca
gccatcatcacctgcctattccctgttccagcaagagaacagaacctggccagagtgttt
gcgggaatgtctgacggcctggtggcagtgtacagcttggtggaagaccttcctctggag
ggggaagcctacctgtgttcacacaccctcaacaagacggtgtttggtctgaaggacaca
gatcccagacagagaccctacccagtcaggagcatggctctggtcagcagtggctcccag
ctatggttctccaacggtccgggtgtgctggtcatcgactgtctgagtcttcaggcagtt
cgaaggctggagctctacagcccgccatcctccatcatatcaatgacaaccagcttcagt
ctatggggagaggaggcagtctggactattgatgaccacatcaacaccctgctgctctac
catgctgcctcctaccagctctgtgccaagtactgctgcggagacagcaatcctctacgg
gacgtcttcactgtgcagcgtcctgcaggggttagcatggtgacaaccactgacctcaag
aacacggcccaagaagagaagcgggaatgtattaatggagaagtgacattgatctacagt
gaggaggcgggaactcagatcatccaacaccaggattcactgacagactactgctccata
tcatccaactacttgctggagccgctggggtcagacacctcaggcctcagctcattagcc
agccacagcagtgtaccactgcctgcagaggaggagacgggcaggtaccaggaccagcag
gcatccatcaaccctgagtctgatctggactctccagagactgtgaaccctacaacgcct
cagctgcgagccttcactgtgcttcctgtgaacggaactctgtgggtccccaggcgtgga
ggtgatgtgatggtcatcgaaatgcagtcacatgccgatcagctgacggggcgtgtcatc
gctgtcctcagtccacccggatgtttcactttggggatcctggaggaggcagcactagtg
gcaaaggacacagttgtatgtgcctttcgtaaggaaaatatggagtggtgcctgtgtgtc
tggaggggctggggctgccacgagctgaaagtcttctaccagtcctacgaggagctgggc
cgcttggagaccagcatgaggaaaagaaggtag
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integrated database retrieval system
