Siniperca chuatsi (mandarin fish): 122873140
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Entry
122873140 CDS
T08948
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
schu03013
Nucleocytoplasmic transport
schu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122873140 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
122873140 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122873140 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122873140 (xpo1a)
03009 Ribosome biogenesis [BR:
schu03009
]
122873140 (xpo1a)
03016 Transfer RNA biogenesis [BR:
schu03016
]
122873140 (xpo1a)
03036 Chromosome and associated proteins [BR:
schu03036
]
122873140 (xpo1a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122873140 (xpo1a)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122873140 (xpo1a)
Pre-60S particles
122873140 (xpo1a)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122873140 (xpo1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122873140 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Gluconate_2-dh3
Motif
Other DBs
NCBI-GeneID:
122873140
NCBI-ProteinID:
XP_044045437
LinkDB
All DBs
Position
LG3:complement(3075830..3095557)
Genome browser
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFNQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMCQLKQMLPL
NTNIRMAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETALRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagaaatgacgatgttggcggatcacccagccagacagctgctggacttcaac
cagaaactggacatcaacctgttggacaatgttgtcaactccatgtaccacgacattgga
tcccagcaacgagtggcccaggaagttctcaccaacctgaaggaccatccagacgcctgg
acgagggtcgacactatcctggagttctctcagaacatgaagactaaatattatgcactg
cagattctggagacagtcatcaaaacacgctggaagattctccctagaaatcagtgtgaa
ggcatcaagaaatacgttgttgggttgatcatcaagacttcgtctgatcctgcaaacatg
gagaaagagggagtgtacatttcaaaactcaacatgatcctcgtgcagatcctgaagcag
gaatggcccaaacactggcccacctttatcagcgatatcgtgggagcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaaactgctcagcgaggaggtttttgac
ttctccagtggccagatgacccaagtcaaggccaagcacctcaaagacagcatgtgcaac
gagttttcccaaatattccagctgtgccagtttgtgatggaaaactcccagaatgcccca
ctggtccatgccacgctggagactctcctccgcttcctgaattggattcctttaggttac
atcttcgagactaagctcatcagcactctggtctacaagttcttgaacgtgcccatgttt
cgcaacgtgacgctaaaatgtttaacggagattgccggagtgagcgtcaaccagtacgag
gagcagttcgtcagcctgtttaccctcaccatgtgccagctcaaacagatgctgcctttg
aacactaacatcagaatggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagaacacggccagctcatcgagaagagg
cccaacctgcgagagacactcatggaggccctgcactacatgctgctggtgtcggaggtg
gaggagacggagatctttaagatttgtctcgagtactggaaccacctggcagcagagctc
tacagagagagtcccttctccacctccagcaccccgctgctgtccgacgtccctccacgc
agacacctctacctgcctgtactctcccaggtgcgtttgctgatggtgagccgcatggcc
aaaccagaggaggtgctggtggtggagaacgaccagggcgaggtggtcagggagttcatg
aaggacacggacgccattaacctttacaagaacatgagggagactcttgtgtatctgacc
catctggactacgccgacactgaacgcatcatgacagagaagctccacaaccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagc
ggggcgatgcacgaggaggatgagaagaggttcctggtaaccgtcatcaaggacctgctt
ggcttgtgtgagcagaaaagagggaaggacaacaaggccatcattgcgtccaacatcatg
tacattgtgggccagtatcctcgcttcctccgagcccactggaagttcctcaagactgtc
gtcaacaagctgtttgagttcatgcacgagacccacgacggtgtacaggacatggcgtgt
gacactttcatcaagatcgcccagaagtgccggcgtcattttgtccaggttcaggtgggc
gaggtgatgcccttcatcgatgagatcctcaacaacatcaacaccatcatctgtgacctg
cagccacagcaggttcatacgttttatgaggccgttggctacatgattggagctcagaca
gaccaggcagttcaggagcttctgatagagaagtacatgctgctgcctaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcagagacggtg
cgtcagctgggcagcatcctaaagacaaacgtccgagcctgtaaagctgtcggccatccc
tttgttgtccagctgggacgaatctacctggacatgctcaacgtctacaagtgcctgagt
gaaaacatctcctcggctgtccagaccaacggtgagatggtgaccaaacagcctctgatc
aggagtatgaggacggtaaagagagagacattgaagctgatctcaggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaactttgtgccccccctgctggaggcggttctc
atcgactaccagaggaacgtgcctgctgccagagagcccgaggtcctcagcaccatggca
accatcgtcaacaagctgggagtccacatcacgggtgaaatccccaagatctttgacgcc
gtctttgagtgcactttgaacatgatcaacaaggactttgaagaattcccagaacacaga
acccatttcttctacctccttcaagccgccacctcccagtgcttcccagccttcctgtcc
atcgccccggcccagttcaaactgatcctagactccatcatctgggccttcaagcacacg
atgaggaacgtggccgacacaggtctacagatcctgtacacactcctgcagaacgtgtct
ggagaggaggcggcagcacagagcttctaccagacgtacttctgtgacatcctgcagcac
atcttctccgtggtcactgatacctctcacactgcaggtctgaccatgcacgccaccatt
ttggcctacatgttcaacctggtggaggaggggaaggtcagtgttgctctgagcgccgcc
agccctgccaacaaccaggcgcacgtccaggagtacatcgccaacctgctgaagacggcc
ttcccccatctgcaagatgcccaggtgaaggtgtttgtaacgggtctgttcagcttgaat
caggacatccccgccttcaaggagcacctgagggacttccttgtgcagatcaaagagttt
gctggcgaggacacgacggacctgttcctggaggagcgagagacggctctgcgccaagcc
caggaggagaaacacaagctccagatgtccgtgcccggcatcctcaaccctcacgagctg
ccggaggagatgtgcgactga
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integrated database retrieval system
