KEGG   Siniperca chuatsi (mandarin fish): 122873237
Entry
122873237         CDS       T08948                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03420  Nucleotide excision repair
schu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122873237 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122873237 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:schu04121]
    122873237 (cul4a)
   03400 DNA repair and recombination proteins [BR:schu03400]
    122873237 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:schu04147]
    122873237 (cul4a)
Ubiquitin system [BR:schu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     122873237 (cul4a)
DNA repair and recombination proteins [BR:schu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122873237 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122873237 (cul4a)
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122873237 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HAT_PRP39_N
Other DBs
NCBI-GeneID: 122873237
NCBI-ProteinID: XP_044045614
LinkDB
Position
LG1:12838609..12849589
AA seq 757 aa
MAEDTRQDKRASFSAITEHNTNGMARTSAVASSKTGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSGVQKRTVDGILEQIELERNGETIDRSLLRSLLGMLSDLQVYKDSFEERFLIETNRL
YATEGQRLMQERDVPEYLHHVARRLEEENDRIMSYLDQSTQKPVISCIEKQLLGEHVTAI
LQKGLSILLDEHRVTELALLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMV
QDLLDFKDKMDNVAQSCFTRNEGFINAMKEAFEAFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQYIQNQSEPSNIELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSMEEIRTATGIEEGELKRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELFNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggcagaggacacccgacaggacaagagagccagtttctctgctataacggagcacaac
accaacgggatggccaggacctccgctgtggcctcaagcaaaactggcgcttcaaagaaa
ttagtgatcaaaaatttcaaagacaggccaaaactagcggagaactatactgaggacacg
tggctgaagctacgggatgcagtgggtgccatccagaacagcacctctatcaagtataat
ctggaagagctctatcaggcggtagagaacctctgttcatataaagtctcccccacgctg
tacaagcagctacggcaggtctgtgaagaccatgtgcaggcccagatccaccagtttaga
gaagagtcattggacaacctttccttcctgaagcgaatgaatcgctgctggcaggaccac
tgcaggcaaactataatgatccgaagtatctttctcttcctggatcgtacctatgtgctt
cagaactccctactcccctccatctgggacactgggttggaactgtttcgtactcacatt
gtgagtgacagtggagttcagaagcgcacagtagatggcattttggagcagatagaactt
gagcgtaatggagagacaatagaccgcagtctgctcaggagtctactgggcatgctgtca
gacctacaggtttacaaggattcctttgaggagagatttttgatcgagaccaatcgcctg
tatgcaacagagggacagcggctgatgcaggagagagatgtgcctgagtacctgcaccat
gtggctcgtcggttggaagaggagaatgatcgtatcatgagctacctcgaccagagcact
cagaaaccagttattagctgcattgagaaacaacttttaggagaacatgtgactgcaata
ctccaaaagggtctaagcatcctgctggatgagcatcgtgtgactgagctggccctcctc
taccagctcttcagcaaggtgaagggaggacttcctacactgctgcagttctggagggat
tacataaagtcctttggtggagagattgtgtgtactccagagaaagacaaggacatggtg
caagacctactagacttcaaagacaagatggacaacgtggcacagagctgctttacacgg
aatgagggcttcatcaacgccatgaaggaggcctttgaggcctttatcaacaagagaccc
aacaaacctgctgaacttattgctaaatatgtggattccaagttaagagcagggaacaag
gaggctacagaggaggagctggagagaatcctggacaagataatgataatcttccgtttc
atacacggaaaagatgtgtttgaagctttttataagaaggacttggccaagcgtctgctg
gtcggcaagagtgcctctgttgatgctgaaaagtccatgctctccaagctcaaacacgaa
tgtggagcagcatttaccagtaagctagaggggatgttcaaagacatggaactgtccaaa
gacataatgatccagtttaaacagtatatacagaaccagagtgagccaagcaacatagaa
cttactgtcaacatcctcactatgggatactggccttcatacacgcccatggaggtccac
ttgcccccagagatggtaaaactccaggaggtgttcaagctgttctacctggggaagcac
agtggaaggaagctgcagtggcagcccacactgggccacgctgtactaaaggcggagttt
aaagagggtaagaaggagctgcaggtctctctgttccagacgctggtgctgctgatgttt
aatgagggagaggaattcagcatggaggagattcgcactgccactggcatagaggaagga
gagctcaagcgtacactgcagtccctggcctgcggaaaagcacgcgtcctcaacaagaac
cctcgagggaaagacgtggaggatggagaccgtttcaatttcaacaatgattttaaacac
aaactgttccgcatcaagatcaaccagatccaaatgaaggaaactgtagaggagcaggta
agcaccacagagcgtgtgtttcaagacaggcagtatcagattgatgcagctgtggtgcgc
ataatgaagatgaggaagaccctcagtcacaacctcctggtatcagagctcttcaaccag
ctgaagttccctgtcaagccgggcgatctgaagaagcggatcgagtccctcatagacaga
gactacatggaacgtgacaaggagactcctaaccagtaccactatgttgcctga

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