Siniperca chuatsi (mandarin fish): 122873244
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Entry
122873244 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122873244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122873244
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122873244
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122873244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf-UDP
zf_RING_Vps8
WWE_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122873244
NCBI-ProteinID:
XP_044045621
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Position
LG3:31160589..31194982
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AA seq
753 aa
AA seq
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MANSNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDSRLS
PYIIDLQSMHQFRQDTGTIRPVRRSFYDPGSAPGQGWQWEWENDAGTWTPYDMEVAIAIE
NAHNCQQPCLDLTPLGFCYLIDFQNMTQVNRQSQRCRRIQRRADMAYPLVSGPLPVPKGG
GGGLTGALLGVGVSGTSMGIGSTVYPNGGLPATGLGQPCSCQQCMLVLSVKTNTGGAGEG
GAGIQTLGRRSLTMQRPKNSAPTTSKPLSLSKSVTLGRGQQQNSNSNSNYYQTLPHGLAI
SKNIASPRRNAQLFAQSLAALTAGTSSLGISSSSNRPPPPSLPPPQPPSSNPNLIPPSIP
AKHTSSSVNESVPTATLITPANSMTTPPSPVPSPSPVVMKPQRTLSSTATVCHAPLPQRS
SLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVC
LTRPPKLVLHPPPVSKSDIKPVPGFGHCCRKTTKKQARKGKTPEEVVKKYLQKVKNPPEE
DCTICMEPLGGPSGYKGPGVGPVSRAESVGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCP
TCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIAPGIQGPEHPNPGKPFTA
RGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSN
LTGHGFPDPGHLDNVLEELRAQGITEDDGLMEK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagtaacaacatgcttctggcctctgccgtggtggtgtgggaatggctgaac
gaacacggccggtggcggccctacagccccgccgtctcccaccagatagaggcagccatc
cggagcagcgacccccgcggagggagcgttgtcctcggccaggtggacagccggctctcg
ccgtacatcatagatctccagtccatgcaccagttcagacaggacacagggaccatccgt
ccggtgcggaggagtttttatgacccaggctcggccccgggtcagggctggcagtgggag
tgggaaaacgatgcgggtacgtggacgccctacgacatggaagtggccatcgccatcgag
aacgctcacaactgtcagcaaccctgcctcgacctgacaccacttggcttctgctacctc
attgattttcagaacatgacacaggtgaacagacagagccagaggtgtcggaggattcag
agacgtgctgacatggcctaccctttagtgtctggtcctctcccagtacccaaaggagga
ggtggaggcctaacaggagccctgctgggtgttggggtgtcggggaccagcatggggatt
ggaagcactgtctaccctaatgggggcttgccagctactggactgggccagccttgttcc
tgccagcagtgcatgctggtccttagtgtgaagaccaatacaggaggagcaggggaagga
ggagcagggattcagactctgggtagacgctcactaaccatgcagcggcccaagaactca
gcacccaccacctccaaacctctgagtctgtctaaatcagtcactttgggacgaggacag
cagcagaactcaaactccaactccaattactatcagacgctgccacacggcctcgccatc
tccaaaaacattgcctctccgcgaaggaacgcccagctctttgctcagtcgctggccgcc
ctcaccgctggcacctcctctctaggtatctcttcgtcttccaacaggccgcctccgcca
tccctcccgcctcctcagcctccatcatccaacccaaatttgatccctccgtccattccg
gcaaagcacacctcatcttcagttaacgaatcagtgccaaccgccacattaattacccct
gccaacagcatgaccacacccccttctcctgtgccctctccatcgccggtggtgatgaag
ccgcagcgcacgctgtcgtccacggcaacagtgtgccatgccccgttgccgcagagatca
agcttagccgggctgagcagaccagcgctgcagaggattgcaatggcccagtccagagca
ctcatagcatcaggtgtgcctaccgtcccagtgaagaacctcaatggatccagtcctgtt
caccctgcactggccgggatcacaggtatcctgatgagtgctgctgctctgcctgtgtgt
ctgaccaggcctcctaaactcgtgctgcaccctccgcctgtcagcaagagcgacatcaaa
cctgtgccaggctttggtcactgctgcaggaagaccaccaagaaacaggctcgcaagggt
aaaactccagaggaggttgtaaagaagtatctgcagaaagtaaaaaatccaccagaggag
gactgtaccatctgtatggagccgctggggggtccgtctggatataagggtccaggagtg
gggcctgtgtctcgggcggagtcagtcgggcgactagcacagtgtggacaccagtaccat
ttccagtgtctggtggccatgtataataatggcaacaaggacggcagtcttcagtgtccc
acctgtaaaaccatctacggtgtaaagacaggcaaccagccagcagggaagatggaatac
catgtcatccctcactctctaccagggcatcctgactgcaaaaccatacgcatcatctac
aacatagcaccaggcattcagggaccagagcatccgaacccagggaagcccttcactgcc
agaggctttccccgacactgctacctcccagacagtgagaaaggacgcaaggtactgaga
ctgctcctggtagcatgggaccgaaggttgatcttctcagttggtacttcaagcactaca
ggagagtctgacactgtcatctggaacgaggtccaccataagacagagtttggctccaac
ctgacgggccatggcttccctgaccccggacacctcgacaacgtcctggaagagctccga
gctcagggcatcacagaggatgatggactgatggaaaagtga
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