Siniperca chuatsi (mandarin fish): 122873298
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Entry
122873298 CDS
T08948
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122873298 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122873298 (usp43a)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122873298 (usp43a)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122873298 (usp43a)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122873298 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122873298
NCBI-ProteinID:
XP_044045787
LinkDB
All DBs
Position
LG3:complement(19167803..19275724)
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AA seq
1228 aa
AA seq
DB search
MDTRKENKARKSMKPKTTKRKEKKYKTGRFARRKSLRSFGNFMGRILKTLGTLAHFGDAE
PTDAEDDDGGFGRSASGGFKDDCSHTSREGTVKKSSTVSSTHGSVKDRLSWCYGDKTPGV
LGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICHRRVNGEVRGEERQTARGEVT
EQLASLVRALWTLEYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDANSS
PNNNSSSSNSKTKANAKGPSSLEDRSSLSSASTQQPRDRHSFVQEHFQAQYRSSLTCPHC
LKQSNTFDPFLCISLPIPLRQTRSMCVTLVFSTKGQRYLRVGLAVPLFGSLSCLRVMVAE
EGNISPDQVILSELYSKGFQRSFSDDDDLTAVADSDVVYAFQAPPLYSRGGSAPHSGYHH
SLPSSPYTSTAGPDGQRLPPSGTLSSEYLNQGGSTKVLLLICSTAGSGQQAVRFGPPFLM
HEDRSISWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSSSYSYLSPQDSRPLYH
PAVDRALKFCGPGGPPHVKLVIEWEHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQHSC
TLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRN
KLSTLVRFPLTGLDMAPHVVKRSQSMRNLNSGAWPTSWKQHSGQHHQPADMILPHDYLYD
LYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNTI
PPWSASCSVRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTTCPSSIPDSPESPVFLDNGS
KEEKGGFENRPFIRGLQGRSVSMRAPSKTKDTLSKVLPLRWSFGSKDRRKPDPVLLSVQD
PAPVELVQYLESGRRPRCTKDPIVTLMSEPRSTKEAGRASTNVRSSSVGSMSCVGKKGDE
MPYEPPQVPEGQRRPSDKTASLRRSKGSQTKDESTTNISSSSSSNTLTRRKDARKHISSK
ASQDSEAKRSSSAGVQPSYSTPSLHDGTLRRQKGDRADREHHGTYEGNSKTKKGELPKSH
EGLLSFFKGNFLKKDKDSRKSKEGESGKGGTEEGGRRTLSRLSLSNGAAGGGTGVEGGKS
NGHLGDELANGKVGRTTANIKRSQSSSNIPTKAEQSMRRTASLHRNGMSTAPVPSRSLTD
KPSYGTLQRTRYSTASLGRKRTVPESSF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatacccgcaaggaaaacaaggcaaggaaatccatgaaacccaaaacgacaaagcga
aaagagaagaaatacaaaaccgggaggtttgccaggaggaaatcgctgcgatcttttggt
aatttcatgggaaggatccttaaaactttgggtactttggcgcactttggcgacgcggaa
ccgacggacgcagaggacgacgacggcggcttcgggcgaagcgcgtctgggggtttcaaa
gacgactgttcgcatacctccagggagggaaccgtgaagaagagctccacggtgtcctcc
actcacggctctgtgaaagacaggctgtcgtggtgctacggcgacaagacccccggggtg
ctgggactgaagaaccacggcaacacctgtttcatgaacgccgtggttcagtgcctcagc
aacacggacctgctggccgagtacctcgggctggagcagtacaagtcggatatatgccac
cggagggtgaacggggaggtgagaggcgaggagcggcaaaccgcccggggagaagtgacc
gagcagctggcgtcgctggttcgagcgctgtggacgctggagtacacgccgcagctatct
gtggagttcaagagcattgtggccaagtacggctctcagtttcggggaaactctcagcat
gatgccctcgagttcctcctctggcttttggacagagttcatgaagatgctaattccagc
cccaacaacaacagcagcagcagcaacagcaagaccaaagccaatgccaagggacccagt
tcattggaggatcgttccagtctcagttcagccagcacacagcagcctcgagatcgacac
agttttgtccaggaacacttccaggctcagtacaggtcctctctgacgtgccctcattgc
cttaagcagagcaacaccttcgacccgtttttatgtatctccctgcctatccccctacga
caaaccaggtcgatgtgtgtgacgctggtgttcagtacgaagggtcagaggtacctgcgg
gtggggctggctgtacctctttttgggtccctgtcctgcctgcgagtcatggtggcagag
gagggcaacatctccccagaccaggtcatcctatcagagttgtactccaagggtttccag
cgttccttttccgatgatgatgacctgacagcagttgctgatagcgacgtcgtctacgcc
tttcaggctcctcccctctatagtcgtggaggctccgcaccccactcagggtatcaccac
agcctcccttcctccccctacacctctacggctggacctgatggacagaggttaccccca
tctggcaccctctcctctgaatacctgaaccagggtggctccacaaaagtcctcctcctc
atctgcagcacagcaggatctggccagcaggctgtcaggtttggacctccatttctcatg
catgaggacaggagcatctcctgggaccagctgcagcagagcatcctcagcaagctctat
tatctgatgctgaatggatctcaggctcagaatgctggggtgctgtttaagatcagagtg
gtgggaggatcgtcatcctacagctacctgtcgccgcaggacagcaggccactgtaccac
cctgcggttgacagagctctgaagttctgcggccccgggggccctccccacgtgaagctt
gtcatcgagtgggagcacaagactaaagaatgtctgtttggcagcatccaggaggaggtg
gtaaaggatgcggagagtgtgaggaaccagcagcagcagcacctgcagcagcatagctgt
accttagacgaatgcttccagctgtataccaaagaagaacagctcgccccagatgatgcc
tggaagtgtccccactgtaagcagcttcagcagggcatggtgaagatgagcctgtggact
ctccctgacatactgatcctccatctcaagcgcttccgacaggtaggcgagcggaggaac
aagctgtcaaccctggtgcgtttcccactgactggtttggacatggccccgcatgtagtg
aagaggagtcagagtatgaggaacctgaactcaggagcctggccaacttcctggaagcag
cactcaggccagcaccaccaacctgccgacatgatcctcccccacgactatctgtatgac
ctctatgctgtgtgtaaccatcatggaggaatgcatggaggacattatactgcttactgt
aggaactcagtggatggacaatggtatagttacgatgacagcagcgtagacttggtgcca
gaggaagaagtatgtaccagaggagcctacatcctcttctaccagcgacgcaacaccatt
cctccatggtcggccagttgctccgtcagaggatccacaagttcatcaatgtcagaccac
tggttaatccggctgacaggggacagtaagagaggcagtctggtctctcgatcctccacc
acctgcccatcttccatacctgactcgcctgagtctccagtcttccttgacaatggttct
aaagaggaaaaagggggttttgagaacaggccatttatcaggggtcttcagggacgcagt
gtgagcatgagagcccccagcaagaccaaggacaccctgagcaaagtgcttcccctgcgc
tggtcctttggttcaaaggacagacggaaacctgacccagtacttctatctgtccaagat
cctgcccctgtggagctggtacagtacttggaatctggccggcggccccggtgtacaaag
gatccaatagtaacgttgatgagcgaaccacgcagcacaaaggaagctggccgggcttca
accaatgttcgatcttccagtgttgggagcatgagttgtgtgggtaagaaaggagatgag
atgccatacgagcctccacaggtcccagagggccagaggaggccatcagataagacagcc
agcttgagacgcagcaaggggagccagacaaaagatgagagcaccacgaatatcagcagt
agctctagcagtaacaccctcaccaggaggaaggatgccaggaagcatatctcctccaaa
gcttctcaggacagtgaggcaaaaaggagttccagtgctggagttcagcccagctacagc
actccgagccttcatgatgggactctgagaaggcaaaaaggggacagggctgatagggaa
caccacggtacttatgaaggaaactctaagaccaagaagggagaattgcccaagagccat
gagggactgctctccttcttcaaaggtaacttcctgaagaaagacaaggactcaaggaag
tccaaggagggtgagtcagggaaaggaggaactgaagaaggaggtagaaggaccctctct
aggctgtcactgtccaacggagcagcaggaggaggaactggggtggaaggaggcaagtct
aatggccatctgggtgatgagctggcaaacgggaaggttggacgaacaacggctaacatc
aaacgctcccaaagctcctccaacatccccaccaaagcggagcagagcatgcgtaggaca
gcatctttgcatcgtaatgggatgtctacagccccggtaccatcccgcagcctgacagac
aaaccatcttatggcaccctgcagaggactcgttacagcacagcctcactgggacgcaaa
aggacagtccccgagtccagcttctga
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integrated database retrieval system