KEGG   Siniperca chuatsi (mandarin fish): 122873298
Entry
122873298         CDS       T08948                                 
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
  KO
K11856  ubiquitin carboxyl-terminal hydrolase 43 [EC:3.4.19.12]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:schu01002]
    122873298 (usp43a)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:schu04121]
    122873298 (usp43a)
Enzymes [BR:schu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     122873298 (usp43a)
Peptidases and inhibitors [BR:schu01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   122873298 (usp43a)
Ubiquitin system [BR:schu04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    122873298 (usp43a)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 122873298
NCBI-ProteinID: XP_044045787
LinkDB
Position
LG3:complement(19167803..19275724)
AA seq 1228 aa
MDTRKENKARKSMKPKTTKRKEKKYKTGRFARRKSLRSFGNFMGRILKTLGTLAHFGDAE
PTDAEDDDGGFGRSASGGFKDDCSHTSREGTVKKSSTVSSTHGSVKDRLSWCYGDKTPGV
LGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICHRRVNGEVRGEERQTARGEVT
EQLASLVRALWTLEYTPQLSVEFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDANSS
PNNNSSSSNSKTKANAKGPSSLEDRSSLSSASTQQPRDRHSFVQEHFQAQYRSSLTCPHC
LKQSNTFDPFLCISLPIPLRQTRSMCVTLVFSTKGQRYLRVGLAVPLFGSLSCLRVMVAE
EGNISPDQVILSELYSKGFQRSFSDDDDLTAVADSDVVYAFQAPPLYSRGGSAPHSGYHH
SLPSSPYTSTAGPDGQRLPPSGTLSSEYLNQGGSTKVLLLICSTAGSGQQAVRFGPPFLM
HEDRSISWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSSSYSYLSPQDSRPLYH
PAVDRALKFCGPGGPPHVKLVIEWEHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQHSC
TLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRN
KLSTLVRFPLTGLDMAPHVVKRSQSMRNLNSGAWPTSWKQHSGQHHQPADMILPHDYLYD
LYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNTI
PPWSASCSVRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTTCPSSIPDSPESPVFLDNGS
KEEKGGFENRPFIRGLQGRSVSMRAPSKTKDTLSKVLPLRWSFGSKDRRKPDPVLLSVQD
PAPVELVQYLESGRRPRCTKDPIVTLMSEPRSTKEAGRASTNVRSSSVGSMSCVGKKGDE
MPYEPPQVPEGQRRPSDKTASLRRSKGSQTKDESTTNISSSSSSNTLTRRKDARKHISSK
ASQDSEAKRSSSAGVQPSYSTPSLHDGTLRRQKGDRADREHHGTYEGNSKTKKGELPKSH
EGLLSFFKGNFLKKDKDSRKSKEGESGKGGTEEGGRRTLSRLSLSNGAAGGGTGVEGGKS
NGHLGDELANGKVGRTTANIKRSQSSSNIPTKAEQSMRRTASLHRNGMSTAPVPSRSLTD
KPSYGTLQRTRYSTASLGRKRTVPESSF
NT seq 3687 nt   +upstreamnt  +downstreamnt
atggatacccgcaaggaaaacaaggcaaggaaatccatgaaacccaaaacgacaaagcga
aaagagaagaaatacaaaaccgggaggtttgccaggaggaaatcgctgcgatcttttggt
aatttcatgggaaggatccttaaaactttgggtactttggcgcactttggcgacgcggaa
ccgacggacgcagaggacgacgacggcggcttcgggcgaagcgcgtctgggggtttcaaa
gacgactgttcgcatacctccagggagggaaccgtgaagaagagctccacggtgtcctcc
actcacggctctgtgaaagacaggctgtcgtggtgctacggcgacaagacccccggggtg
ctgggactgaagaaccacggcaacacctgtttcatgaacgccgtggttcagtgcctcagc
aacacggacctgctggccgagtacctcgggctggagcagtacaagtcggatatatgccac
cggagggtgaacggggaggtgagaggcgaggagcggcaaaccgcccggggagaagtgacc
gagcagctggcgtcgctggttcgagcgctgtggacgctggagtacacgccgcagctatct
gtggagttcaagagcattgtggccaagtacggctctcagtttcggggaaactctcagcat
gatgccctcgagttcctcctctggcttttggacagagttcatgaagatgctaattccagc
cccaacaacaacagcagcagcagcaacagcaagaccaaagccaatgccaagggacccagt
tcattggaggatcgttccagtctcagttcagccagcacacagcagcctcgagatcgacac
agttttgtccaggaacacttccaggctcagtacaggtcctctctgacgtgccctcattgc
cttaagcagagcaacaccttcgacccgtttttatgtatctccctgcctatccccctacga
caaaccaggtcgatgtgtgtgacgctggtgttcagtacgaagggtcagaggtacctgcgg
gtggggctggctgtacctctttttgggtccctgtcctgcctgcgagtcatggtggcagag
gagggcaacatctccccagaccaggtcatcctatcagagttgtactccaagggtttccag
cgttccttttccgatgatgatgacctgacagcagttgctgatagcgacgtcgtctacgcc
tttcaggctcctcccctctatagtcgtggaggctccgcaccccactcagggtatcaccac
agcctcccttcctccccctacacctctacggctggacctgatggacagaggttaccccca
tctggcaccctctcctctgaatacctgaaccagggtggctccacaaaagtcctcctcctc
atctgcagcacagcaggatctggccagcaggctgtcaggtttggacctccatttctcatg
catgaggacaggagcatctcctgggaccagctgcagcagagcatcctcagcaagctctat
tatctgatgctgaatggatctcaggctcagaatgctggggtgctgtttaagatcagagtg
gtgggaggatcgtcatcctacagctacctgtcgccgcaggacagcaggccactgtaccac
cctgcggttgacagagctctgaagttctgcggccccgggggccctccccacgtgaagctt
gtcatcgagtgggagcacaagactaaagaatgtctgtttggcagcatccaggaggaggtg
gtaaaggatgcggagagtgtgaggaaccagcagcagcagcacctgcagcagcatagctgt
accttagacgaatgcttccagctgtataccaaagaagaacagctcgccccagatgatgcc
tggaagtgtccccactgtaagcagcttcagcagggcatggtgaagatgagcctgtggact
ctccctgacatactgatcctccatctcaagcgcttccgacaggtaggcgagcggaggaac
aagctgtcaaccctggtgcgtttcccactgactggtttggacatggccccgcatgtagtg
aagaggagtcagagtatgaggaacctgaactcaggagcctggccaacttcctggaagcag
cactcaggccagcaccaccaacctgccgacatgatcctcccccacgactatctgtatgac
ctctatgctgtgtgtaaccatcatggaggaatgcatggaggacattatactgcttactgt
aggaactcagtggatggacaatggtatagttacgatgacagcagcgtagacttggtgcca
gaggaagaagtatgtaccagaggagcctacatcctcttctaccagcgacgcaacaccatt
cctccatggtcggccagttgctccgtcagaggatccacaagttcatcaatgtcagaccac
tggttaatccggctgacaggggacagtaagagaggcagtctggtctctcgatcctccacc
acctgcccatcttccatacctgactcgcctgagtctccagtcttccttgacaatggttct
aaagaggaaaaagggggttttgagaacaggccatttatcaggggtcttcagggacgcagt
gtgagcatgagagcccccagcaagaccaaggacaccctgagcaaagtgcttcccctgcgc
tggtcctttggttcaaaggacagacggaaacctgacccagtacttctatctgtccaagat
cctgcccctgtggagctggtacagtacttggaatctggccggcggccccggtgtacaaag
gatccaatagtaacgttgatgagcgaaccacgcagcacaaaggaagctggccgggcttca
accaatgttcgatcttccagtgttgggagcatgagttgtgtgggtaagaaaggagatgag
atgccatacgagcctccacaggtcccagagggccagaggaggccatcagataagacagcc
agcttgagacgcagcaaggggagccagacaaaagatgagagcaccacgaatatcagcagt
agctctagcagtaacaccctcaccaggaggaaggatgccaggaagcatatctcctccaaa
gcttctcaggacagtgaggcaaaaaggagttccagtgctggagttcagcccagctacagc
actccgagccttcatgatgggactctgagaaggcaaaaaggggacagggctgatagggaa
caccacggtacttatgaaggaaactctaagaccaagaagggagaattgcccaagagccat
gagggactgctctccttcttcaaaggtaacttcctgaagaaagacaaggactcaaggaag
tccaaggagggtgagtcagggaaaggaggaactgaagaaggaggtagaaggaccctctct
aggctgtcactgtccaacggagcagcaggaggaggaactggggtggaaggaggcaagtct
aatggccatctgggtgatgagctggcaaacgggaaggttggacgaacaacggctaacatc
aaacgctcccaaagctcctccaacatccccaccaaagcggagcagagcatgcgtaggaca
gcatctttgcatcgtaatgggatgtctacagccccggtaccatcccgcagcctgacagac
aaaccatcttatggcaccctgcagaggactcgttacagcacagcctcactgggacgcaaa
aggacagtccccgagtccagcttctga

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