Siniperca chuatsi (mandarin fish): 122873341
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Entry
122873341 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: complement C3-like
KO
K03990
complement component 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04145
Phagosome
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122873341
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122873341
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122873341
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122873341
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122873341
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122873341
Peptidases and inhibitors [BR:
schu01002
]
Peptidase inhibitors
Family I39: alpha2M family
122873341
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Opsonins
122873341
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122873341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
MG1
A2M
NTR
A2M_recep
MG4
MG2
MG3
ANATO
C3_CUB2
Transglut_C
C3_CUB1
Motif
Other DBs
NCBI-GeneID:
122873341
NCBI-ProteinID:
XP_044045883
LinkDB
All DBs
Position
LG3:complement(23423509..23450978)
Genome browser
AA seq
1684 aa
AA seq
DB search
MSQQWSCSRATVYIDSRSGSGRRMSRTLLWLLASLAFASLTSLADGAPLNVMSAPNLLRV
GTAENIFVECQDCTGGDIRVEISVMNHPTKTKRLTSTSVTLTSAKNFQELGQIMIPAGDF
SKDPNMKQYVYLQAQFPDRLLEKVVLVSFQSGYIFIQTDKTIYTPNSKVHYRMFAVTPRM
EPVERDDATQTDASIAIEIVTPEGIILPLDPVSLKSGIHSGDFQLAEIVSPGLWKVVAKF
HSNPQQSYSAEFEVKEYVLPSFEVKLTPVSAFFYVDSQELTVNIKATYLFGEDVDGMAYV
VFGVMQEGQKKSFPSSLQRVPIERGNGVVKLKREHITQTFPEILKLVGSSLFVAVSVLTE
SGGEMVEAELRGIQIVTSPYTIHFKRTPKFFKPGMSFDVAVEVVNPDDTPAQGVAVVVDP
GQVQGLTAANGMARLTINIDARTNTLTITAKTKDPDILPERQASATMTALPYTTKGNNYI
HIGVDAAELEIGENLKINLNLNRQPNQDNDITYLILSRGQLVKNGRYKTKGQVLISLIVT
VTKEMLPSFRIIAYYHTNDNEVVSDSIWVDXKDSCMGSLTLESTRPNPSYEPRRMFGLKV
TGDPEATVGLVAVDKGVYVLNNKHRLTQKKVWDIVEKYDTGCTPGGGKDSMSVFYDAGLL
FESNTASGTPYRQELKCPAPSRRKRATTIMDVTTSLVSQYNDQLQRECCLDAMRDTPVSY
TCETRSEYIMDGAACVEAFLHCCKEMESQRAEKKEDNLILARSEEDDNSYMDSNEIVSRT
KFPESWLWSDIKLPPCPEGKPNCDTTSFLKNVPLQDSITTWQFTGISLSRTHGICVGKPL
EVIVRKEFFIDLRLPYSAVRGEQLEVKAILHNYSPDPATVRVDLIEEENVCSAASKHGKY
RQEVRVGPQTTRSVPFIIIPMKDGQYRIEVKAAVKDSSLNDGIMKMLRVVPEGVLVKSPQ
IIILDPSKNGVAGKQEEIINSGIPKKDLVPSTPTSTQISVTGREQISALVENAISGNSMG
SLIKQPDGCGEQNMASMTLPVIATTYLDKTNQWETVGFQKRNEALQHIKTGYQNQLAYRK
NDGSFAVWAHRQSSTWLTAYVAKVFAMANSLVAVQSNIICDAVKFLILNTQQPDGIFKEV
GYVLSSVLRGDVQGTDSDASMTAFCLIAMQESRTLCAATVNSLPGSIDKAVAYLEGRLPS
LTNPYAVAMTSYALANENKLNKEILYKFVSPELSHWPVPKGRVFTLEATAYALLALVKAK
AFEEAGPVVRWFGKQQKVDGGYGSTQATIMVYQAVAEYWANAKEPEYDLNVDILLPGRSK
PDKYNFNRDNHYATRTSKINDINQNVKVTATGTGEATLTMVSLYYALPKEKESDCQKFNM
TVQLLPGNLRNPNEDEKIYKLRIEVLYKDKEHDATMSILDIGLLTGFTVNTNDLDLLSKG
RARTIAKYEMNTVLSERGSLIIYLDKVSHTRPEEITFRIHQKLNVGVLQPAAVSVYEYYE
QTPCVKFYHPERKAGQLLRLCRNDECTCAEENCSMQKKGKISNDERTAKSCESTLTSKID
FVYKVRLEEFTDGLSTDIYTMRVLEVIKEGSYDVGPRGKLRTFLSYPHCRESLNLGTGKT
YLIMGTSKDIHRDDQNQSFQYVLGERTWIEYWPTEAECQIEEHRSTCLGMEEMVQQYEVF
GCQQ
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagtggagttgcagcagagcaacagtgtacattgacagcagatcaggatca
ggtaggaggatgagtaggactctgctgtggctgcttgcctctctggcctttgcctctctc
acttctctggctgatggagctccattgaatgtgatgtctgcccccaacttgttacgggta
gggacagcagaaaacatctttgtggagtgtcaagactgcacaggaggagacattagggtt
gagatcagcgtgatgaaccatccaaccaaaaccaaaaggctgacgtctacatctgtgacc
ctcaccagtgcaaaaaacttccaggagctcggacaaataatgatccctgctggtgacttc
agtaaggatcccaacatgaagcagtatgtgtacctgcaagctcagttccctgaccgactg
ctggagaaagtcgtgttagtgtccttccagtctgggtacatcttcatccaaactgacaag
accatctacacccccaacagcaaagttcattacaggatgtttgcagtgacgccccgtatg
gagcctgtagagagggatgatgcaacccaaactgatgcttctattgccattgagattgtg
acccctgaaggcataattttaccacttgatccagtctctctaaaatcagggatccactcc
ggagatttccaacttgctgaaattgtcagtcccggactgtggaaggtagtggcgaagttc
cacagcaacccacagcagagctattctgcagagttcgaggtcaaagaatatgtgctgccc
agttttgaggttaaactgacacctgtgagcgccttcttctacgtggacagtcaagagcta
accgtcaacatcaaagctacgtatctgtttggtgaagacgtggatgggatggcctatgtg
gtatttggggttatgcaagagggtcaaaagaagagctttcccagctctcttcagagagtg
ccgatcgagagaggtaatggagtggtcaaactgaagagagagcacatcacacagaccttc
ccagaaatcctcaaactggtggggagttccttatttgtagctgtcagtgtgctgacggag
agcggtggtgaaatggtggaggcagagttgagaggtatccagattgtcacatcaccttac
accatccacttcaagagaacgcccaaatttttcaaaccaggaatgtccttcgatgttgcg
gttgaagttgtgaatcctgatgacactccggcacaaggtgttgcagtggtggtcgatcca
ggacaggtgcaaggcctcactgcagccaatggcatggcaaggcttaccatcaatatagac
gcaaggactaacacactgacaatcaccgcaaagaccaaagatcctgatattttacctgaa
aggcaagcatcagccaccatgacagctctcccatataccaccaaaggcaacaactacatc
cacataggtgtggatgcagctgagctggaaattggagaaaacctgaaaatcaacctcaac
ctcaacaggcagccaaatcaagacaatgacatcacatacctgatcctgagcagaggtcag
cttgtgaaaaatggccgttacaaaacaaaaggtcaagtattgatatccctgatagtcacc
gttaccaaagaaatgctgccatcgttccgcatcatagcctactaccatacgaatgacaat
gaagtggtatcagactccatttgggtggatngcaaagactcctgcatgggctcgctgacg
ctggaatcaaccagacccaatccatcctatgagcctcgcaggatgtttggtctgaaggtc
actggagacccagaggccacagtgggactggtggcagttgacaaaggcgtctacgtccta
aacaataagcaccgcctcacccagaaaaaggtgtgggacatagtagagaagtatgataca
ggctgcacaccaggtggagggaaggacagtatgagtgtgttttatgatgctgggctgttg
tttgagtccaacacggcttctgggactccctacagacaagaattgaaatgtccggccccc
agcaggaggaaacgagccactactataatggacgtcaccaccagcttagtgagtcaatat
aatgaccaactgcaacgtgaatgttgtttggatgccatgagggacacccccgtttcatac
acctgtgagacgcgcagcgagtacatcatggacggtgcagcctgtgtggaggccttcctg
cactgctgcaaggagatggaaagccagcgagctgagaagaaggaggataacctcatactg
gctcgcagtgaggaggatgacaacagttacatggacagcaatgaaattgtttctcgtacc
aaattccctgaaagttggctgtggtcagatatcaaactgcctccttgccctgagggaaaa
cctaactgtgacaccacatcatttttgaaaaatgttcctttgcaagactcaatcacaacc
tggcagttcactggcattagtttgtcaagaactcacggaatctgtgttggcaaaccatta
gaggtaattgtccggaaggaattcttcattgatctcagactgccgtactctgctgtccgt
ggagagcagctagaagttaaggcaatcctccacaactacagtcctgatcctgccacagtg
cgtgtggatctgattgaggaggagaatgtgtgcagtgcagcttctaaacatggaaagtat
cgccaggaggttagagttgggccccaaactacacgatctgtaccctttatcattattccc
atgaaggacggacaataccgcattgaggtcaaagcagctgttaaagactcatcgctcaat
gatggaatcatgaagatgctgcgggtggtgcctgaaggtgtactggtgaaatctcctcaa
attataattctagacccctctaaaaatggtgtagctggtaaacaagaagaaattatcaac
agtggaattcctaagaaagatttggttccaagcacgcctactagcacacagatctctgtg
acagggagagaacaaatatctgcactggtggaaaacgccattagtgggaactctatgggt
agtctgatcaaacagcctgacggctgtggagagcagaacatggccagcatgaccctgcct
gtcattgcaaccacgtatttggacaaaaccaaccagtgggaaactgtgggctttcagaaa
cgtaacgaagccctccaacacatcaagactggctaccagaaccagcttgcctaccgtaaa
aatgatgggtcttttgctgtgtgggcccatcgccaaagtagcacctggctgacggcctat
gttgccaaggtgtttgccatggccaacagtctggtggcagtgcaaagcaacatcatctgt
gacgctgtcaagtttctgattctcaacacacagcaaccagacggcatttttaaagaagtt
ggatatgtgctcagtagcgtattgcgtggtgatgtacaaggcacagattcagatgcctcc
atgacagccttctgccttattgccatgcaggagtcacgcacactgtgtgctgccactgtt
aatagtctcccaggcagtatagacaaagcagtggcctacttggaggggcgtctgcccagc
ctcaccaacccatatgctgttgccatgacgtcttatgccctggccaatgaaaacaaactg
aacaaggagatcctctacaagtttgtttccccagagttgtcccactggccggtacctaag
ggacgtgttttcacactggaggccacagcttatgctcttctggctctggtcaaggccaag
gcctttgaagaagctggacctgttgtcagatggtttggaaaacagcagaaggtggatgga
ggctatggatcaactcaggctactataatggtgtatcaggctgttgctgagtactgggcc
aatgctaaagaaccagagtatgatctgaatgtggatatcttgttgccaggccggtcaaaa
cctgacaagtacaatttcaacagggacaaccactatgccacgagaacatctaaaatcaat
gatataaaccagaatgtgaaagtgactgcaacaggcacaggagaagcaacgctgacaatg
gtgtcgctgtattacgctctgcctaaagaaaaggaaagtgactgtcagaagtttaacatg
acagtgcagctcctcccaggtaatttgagaaatccgaatgaggacgagaagatatacaag
ctgagaatagaggttttgtataaggacaaggagcacgatgcaaccatgtcaatcttggat
attggcttgttaacgggcttcactgttaacacaaatgacctggacttactgtccaaagga
cgtgcccgcactattgcaaaatatgagatgaacacagtcctgtcagaaagaggctcactc
atcatctacctggataaagtttctcacacacgaccagaggagatcacttttaggatccat
cagaagctgaatgtgggcgtcttacaaccagctgctgtgtctgtctatgaatactatgaa
caaacaccttgtgtgaaattctaccacccagagaggaaagctggacagctactgcggctc
tgtagaaatgatgaatgcacatgtgctgaagagaactgcagtatgcagaagaagggaaaa
atcagcaatgatgagcgcacagctaagtcttgtgagagcacactgaccagcaaaatagat
tttgtgtacaaagtgagactggaagaatttacagacggtttgtccactgatatttacaca
atgcgggtactggaagtcatcaaagaaggaagttatgatgtgggtcctcggggtaaactg
cgcacattcctcagttacccgcactgcagggagtccttaaatctggggacgggcaaaacc
taccttatcatgggcacatccaaagatattcacagagatgaccaaaatcaatcgtttcag
tatgtactcggtgagagaacctggatcgagtactggcccacagaagcagagtgtcaaatt
gaggaacacagatctacctgtttgggcatggaggagatggtccagcagtatgaggtcttt
ggatgtcagcagtag
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