Siniperca chuatsi (mandarin fish): 122873449
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Entry
122873449 CDS
T08948
Name
(RefSeq) high affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122873449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schu02000
]
122873449
Transporters [BR:
schu02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
122873449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
122873449
NCBI-ProteinID:
XP_044046087
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All DBs
Position
LG3:complement(28055766..28080609)
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AA seq
632 aa
AA seq
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MNRTSKALWKSWARRQLCAPTLTHEHTLIKLKKTNQGQPGEGDVFLHVLQACGHPGGICH
AGCTVAVKHSRKRTQKLFRMSLNVPGLVVMAAFYLLILGTGIWASMRSKREEKKCTGDGM
EITLLAGRNINLLVGIFTLTATWVGGGFILGIAEATYNPTLGAVWALMPVPYVLTFFLGG
FFFAKPMRENKYMTMMDPFQHKYGNVLSSALIFPALVADVLWVARTLVSLGGTMSVILDL
SYVYSIIISSVVAIIYTLLGGLYSVAYTDVIQLILIFVSLWVCVPFLLTNPHSVDISLTA
YNQTFQAPWVGTVELDEAGKWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCFSSSA
FCLVLGIPSVLVGAVAASTDWNSTSYGLPTPYERNQAGSILPIALQYLTPSYVSIIGIGA
VAAAVMSSMDSALLSSASLFSANIYKNIIRKQASDREMHWVIRISVVVVGLAGTALTFLD
SSVLVFWLVGVDMSYTIMFPQLVCVLFFKVSNGYGATAGYMMGIIMRLLSGEPLIGLPPA
IHFPGCRLDDEGKLTQFFPFRTAIMIISLASILLFSWLASIIFNKDLLPERWDVFKIKRK
QKPTARATDNKRTNSDNEEASAGKQLLRTTSC
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaacaagcaaagctttgtggaagtcctgggcaaggaggcagttatgcgccccc
acactcacacatgagcacacactaataaaactgaagaaaacaaaccaggggcagcctgga
gaaggagatgtttttctccatgtattgcaggcgtgtgggcatcctggtggcatctgtcac
gctggctgtacagtcgctgtgaaacacagcaggaaacgcacacagaagctgttcaggatg
tctctcaatgtgccgggtctggtggtgatggcggcgttctacctgctgatcttgggcaca
ggcatctgggcgtccatgcgctccaagagggaggagaagaagtgcacaggggatggcatg
gagataacgctactggcgggacgcaacatcaacttgctagttggcatcttcactcttact
gctacatgggttggtggaggcttcatcctcggtatagctgaggcaacatacaacccaaca
ctaggcgcagtttgggctctcatgcctgtgccttatgtcctgaccttcttcttaggtgga
tttttctttgccaagcctatgagagagaacaagtatatgacaatgatggaccccttccaa
cataagtatgggaatgttctgagcagtgcactgatctttcccgcactggtggctgatgtc
ctgtgggtggcacgcacactcgtcagcctgggtggaactatgagtgtgatcctggacctg
tcctacgtctactccatcatcatctcctcagtggtggccataatctacacactgctgggg
gggctctactctgtggcctatacagatgtcatccagctcatcctgatctttgtcagtctg
tgggtgtgtgttcctttcctgttgaccaaccctcactctgtggacatctcactgacggcc
tacaaccagaccttccaggctccctgggttggcacggtggagctcgatgaagctggcaag
tggttcgatgatttcatgctgctggctctgggcggtttggcctaccaggcgttctaccaa
agaatcctgtcggcctcctcttacacccaggctcaagtgacttgcttcagttcttcagcc
ttctgcctggtgctgggtatcccctctgtgctggtcggggctgtggctgcatctacagac
tggaactcaaccagctatggattgcctaccccatatgagcgcaaccaggcaggctccatc
ctccccatcgccctgcagtacctcacaccctcctacgtctctatcattggcattggagct
gtagctgctgctgtcatgtcctccatggactcagctcttctgtcttccgcctcattgttt
tccgcaaatatctacaagaacatcatcaggaagcaggcatcagaccgtgagatgcattgg
gtgatccgtatctcagtggtggtggtgggtctggctggcactgccctcaccttcctggac
agcagcgtcctggtcttctggcttgtgggcgtggacatgtcctacaccatcatgttccct
cagctggtctgcgtcctcttcttcaaggtgtctaacggctacggagccaccgcgggctac
atgatgggaatcatcatgagattattgagcggcgagcccctcattggcctcccacctgcc
atccatttccctggttgccggctggacgatgagggaaagctaacccagttcttccccttc
cgcactgccatcatgatcatctcgctcgcatccattctgctcttctcctggctggcgtcc
atcattttcaacaaggatctgctgcctgagaggtgggacgtgttcaagatcaaacgcaag
cagaaaccgacagccagagccacagacaacaagaggaccaactctgataacgaagaagcc
tccgcgggcaagcagctactgcgcaccaccagctgctga
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