Siniperca chuatsi (mandarin fish): 122873456
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Entry
122873456 CDS
T08948
Symbol
pax5
Name
(RefSeq) paired box protein Pax-5 isoform X1
KO
K09383
paired box protein 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122873456 (pax5)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
122873456 (pax5)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
122873456
NCBI-ProteinID:
XP_044046102
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Position
LG3:16349703..16410144
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AA seq
425 aa
AA seq
DB search
MDQGPKSPALRLGRAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV
SHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLA
ERVCDNDSVPSVSSINRIIRTKVQQPPGQTGSVSAHNLATSVAATQVSAVTSDSAGSSYS
ISGILGISSAPDVGKRKRDEGLQESPLANGHSHSGRDFLRKQMRGELFSPQQIEVLDHLF
DRQPPCPIQSSSDLYVSPDSGKTSDYSAMASLTGGLDEMKNSLANPGTGAELGASVSGPQ
SYSLVPGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYSHPQYSTYNES
WRFPNPSLLVFQQDYGSLLGTEIGCSSSLFTSQAGQMQGSPYYYSATSRGAGPAATATAS
AYDRH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggggcccaagagtcctgcactgcggctggggagagcaggacatggcggagtg
aaccagcttggaggtgtgtttgtaaacggcaggcccctcccagatgtagtgcggcagcga
atagtagaactcgcccaccaaggggttcggccctgcgacatctcacgccagctacgagtc
agccatggatgtgtcagcaagatactgggcaggtactatgaaacgggcagtatccgcccc
ggggtaatcgggggatcaaaaccaaaggttgctactcccaaagtggtcgacaagatcgca
gattacaaacgccaaaaccccaccatgtttgcctgggagatccgggacaggctcctggcc
gagagagtctgtgacaacgacagcgtccccagtgtcagctccatcaacaggatcattcgg
acaaaggttcagcagccgcctggccaaacgggctcagtgtcggctcacaacttagcaacg
tctgtggctgccacacaagtgtcagcagtgaccagcgactcagccggctcctcatactcc
atcagtggcattctgggtatcagctcagctcctgacgtgggcaagaggaagagggacgaa
ggtctgcaggagtcaccgctggccaacgggcacagccacagtgggcgggacttcctcagg
aagcagatgagaggggagctgttctcaccgcagcagatcgaggtattggaccacctgttt
gacagacagccaccctgtccaatccaatccagctctgacctctatgtgagccctgactct
ggcaagacatcagattattcagccatggcctcactaactggtggactggacgagatgaag
aacagtttggccaatcctggtacaggggcggaattaggagccagtgtgtccggtccacag
tcctattcactcgttccaggtcgagacctagccagcaccactctgccaggctaccctcct
catgttcctcccactggacagggcagctactccaccccctccctcactggcatggtacct
gggggagatttttctggaagtccatattcccatccccaatattccacatacaatgaatcg
tggagatttcctaaccccagtttattagtgtttcagcaagattatgggtctctcctgggg
acggaaatcggctgctcctccagtctcttcaccagccaggcaggacagatgcaagggtca
ccatactattacagtgcaacatcacggggggcgggccctgctgccactgcaacagcctcc
gcctacgaccgtcactga
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