Siniperca chuatsi (mandarin fish): 122873457
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Entry
122873457 CDS
T08948
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04110
Cell cycle
schu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122873457 (smc3)
04114 Oocyte meiosis
122873457 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122873457 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
schu00535
]
122873457 (smc3)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122873457 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
122873457 (smc3)
Proteoglycans [BR:
schu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122873457 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122873457
NCBI-ProteinID:
XP_044046107
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All DBs
Position
LG3:complement(22446427..22473024)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNMVKEKEER
GISRLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTETNKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSNNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLARSEDLDSLVDKTEGEIKDHIKS
MERWKNIEKEQNDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcatcatccaggggttccgaagttacagggaccaaactgtggta
gacccgtttagtccaaagcacaatgtcattgttggaagaaacgggtcaggaaaaagtaac
tttttctatgccatccagtttgtgctcagtgatgagttcagtcacctgcgacctgaacag
cgcctggccctgctccatgagggaactggtcctcgtgtcatttcggcttttgtggagatt
atatttgacaattctgacaaccggctgccgatcgacaaagaggaagtctctcttcgccgt
gtcattggtgcaaagaaggaccagtacttcttagacaagaagatggtgactaagaatgat
gtcatgaaccttctggagagtgccggcttctcccgcagtaacccctactacatcgtcaag
cagggaaagatcaaccaaatggccacagcacccgactcccagcgcctgaagctgctgaga
gaggtggcagggacacgggtgtatgatgagcgcaaagaggagagtatttctctcatgaag
gagacagaggggaagcgagagaagatcaatgagctgttgaagtatattgaggagcgtctg
cacaccctggaggatgagaaggaggagctggctcagtaccagaagtgggacaaaatgaga
agagccctggagtacaccatctacaaccaggagctgaatgaaacccgcgccaaactggat
gagctgtcctccaagagagagacctgtggagacaaatccagacagctgcgtgatgctcag
caagatgcccgagacaaagtagaggagacggagcgtgttgtgcgagagctaaagtccaag
atctctgccatgaaggaggagaaagagcagctatcggccgagcgccaggagcaaatcaag
cagaggaccaagctcgagctgaaggccaaggacctgcaggacgagctggcaggcaacagc
gaacagaggaaacgcctgctgaaggagcgtcagaagctgttggagaaaatcgaggagaag
caaaaagagctgcaggagactgaacccaaattcaacatggtgaaggaaaaagaggagcgg
ggcatatccagactggcccaggcaacacaggagaggacagacctgtatgccaagcagggc
cgtggcagccagttcacctccaaggaggaaagggacaagtggattaaaaaagagctgaag
tctctggaccaggccatcaatgataaaaagaggcagatcgcagccatccacaaagacctg
gaggacacagagactaataaggagaagaacctcgagcagtacaataaacttgatcaagat
ctaaatgaggtcaagacccgcgttgaggaactggacaaaaagtattatgaagtgaagaac
aggaaagatgagctgcagagtgaaagaaactacctgtggcgtgaggagaacgcagagcag
caggccctggcagccaaacgagaggacctggagaagaaacagcagctccttcgagcggcc
accggcaaggctattctgaacggcattgacagcatcaacaaagtccttgagcatttccgt
cggaagggcatcaaccagcacgtcatcaatggttaccacggcatcgtcatgaacaacttt
gagtgtgagcccgccttttacacctgtgtagaggtgactgctggtaccagactgttctac
cacattgtggagactgacgaagtcagcacaaaaatactaatggagttcaacaaaatgaac
ctgcctggagaagtcacattcctacccctgagcaagctggacgtcagggacactgcctac
ccagagaccaacgatgctatccccatgatcagcaagctgcgctacagcaacaactttgac
aaggccttcaagcatgtgtttggaaagaccctgatttgtcgcagcatggaagtgtccacc
cagctggccagagctttcaccatggactgtataactctggaaggtgaccaggtgagccat
cgtggagctctgacaggaggctactacgataccagaaagtctcgtctggagctgcagaag
gacatgaggaaggctgaggaggaactgggcgagctagaggccaagctcaatgagaacctg
cgcaggaacattgaacgcatcaacaatgagatcgaccaactgatgaaccagatgcagcag
atcgagacacaacagaggaagtttaaggcatccagagacagtattctgtcagagatgaag
atgctgaaggagaagaggcagcagtcagagaagacgttcatgcccaagcaacgcagtctc
caaagtctggaggccagcctccatgccatggagtccaccagggagtcactgaaggccgag
ctgggtacagatctgctctctcagctcagcttggaggaccagaggcgtgtcgatgacctc
aacgatgagatccgtcaactccagcaggacaacagacagttgttgaatgagaggatcaag
ctggagggcatcatgaccagagtggaaacatatctaaacgagaacttaaggaagcgtctc
gaccaagtggagcaggagctaaacgagctgcgagagactgagggaggcacagtgctcaca
gccacaacatctgagctggacggcatcaacaaacgtgtcaaagacactttggctcgatca
gaagatctggattctctggttgacaagacagagggggagatcaaggaccacataaagagc
atggagcgctggaagaacattgagaaggagcagaatgacgccatcaaccacgacaccaag
gagctggagaagatgaccaacaggcagggcatgctgctcaagaagaaagaggagtgcatg
aagaagatcagagagcttggctcactgcctcaggaggcctttgagaagtaccagaccctc
acactcaaacagttgtttcgaaaactcgagcagtgcaacacagagctgaagaagtacagt
catgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaagcta
atcaagcgtcaggatgagttggaccgtggctacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaagtatgaggccatccagctcaccttcaaacaggtgtcaaagaacttc
agtgaagttttccagaagctggtgccgggtggcaaagctacattggtgatgaagaaggga
gatgctgaaggcagccagtctcaagatgagggtgagggcggtgcagacagtgagaggggc
tccggttcacagagcagcgttccctcagtggaccagttcactggagtcggcatcagggtg
tcgttcacagggaagcagggtgagatgagagagatgcagcagctgtctggaggtcagaag
tctctggtggctctggccctgatatttgccatccaaaagtgcgaccctgctcctttttac
ctgtttgatgagatcgaccaggccctcgatgcccagcacaggaaggctgtctcagacatg
atcgtcgagctggcaggccacgcccagttcatcaccaccaccttcaggcctgagctgctc
gagtccgctgacaagttctacggtgtcaaattcagaaacaaggtgagtcacattgatgtg
atcacagcggagcaggccaaagactttgtggaggatgacaccacccatggttaa
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integrated database retrieval system
