Siniperca chuatsi (mandarin fish): 122873507
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Entry
122873507 CDS
T08948
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122873507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122873507
Transcription factors [BR:
schu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
122873507
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
122873507
NCBI-ProteinID:
XP_044046214
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Position
LG3:complement(259049..275708)
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AA seq
517 aa
AA seq
DB search
MLAGSGAGMGTRTGVGRAGNGTGLSSLPVNTAGPGPDTASETDGGQFHDREYSTEVIYSG
SDQDSDSGDDEDTAGSGGDRRGVKRERSEREVGHQSAPTSGGLSGYGGVSPGVPGAKPGK
KTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFA
TRKLQPMITSETGKALIQTCLNSPDSPPRSDPSSDQRMSATGFEETDLTYQVSEADGCSE
VAKDLIKPAFTMSNLPGTTQTTPSSSSSSSTVSMQVQTSAPSWQPPSSSNGTVLKTSTGV
MLPGGFTLMSGASLPPGTHTIPLSQLQGQPLAIQGPVAPGPAATLHAPHTQPTTLLRLPA
TVSLSGGGVSQQLQTIQVQPSTQQTSTNQSSSDIHIPASSAAGLPACIVSSSSSSSSSSV
AGHMMYPGGHTVMYAAPTPSLGDGSLTVLNTFPPTGHAQSHDPSALPQVFLTSLPPVGAQ
IPVSAVQLHPMVISQQSSSNLTELQVVSLDVHQSKDD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagggagcggcgccgggatgggcaccagaaccggagtcgggcgagcgggcaac
ggaaccgggctcagcagccttcctgtgaacacggccggaccgggaccggacacagcctcc
gagaccgacggaggccagttccacgacagggaatacagtaccgaggtgatttacagcggc
tccgaccaggactctgactccggggacgacgaagacacggcgggttcaggcggggacagg
agaggcgtgaagcgggagcggagcgagagggaggtcgggcatcagtcggcgcccacctcc
ggaggcctgagcggctacggtggggtcagccccggggtgccaggagccaaacccggcaag
aaaaccagaggaagagtcaagatcaagatggagttcatagacaacaaactgaggcggtac
acaactttcagcaagaggaagaccgggatcatgaagaaggcgtacgagttgtccacgttg
accggtactcaggtgctgctgctggttgccagtgagacgggtcacgtgtacacctttgcc
accaggaagctgcagccgatgatcacatcagagacggggaaagctctgatccagacctgc
ctcaactctccggactccccgcctcgctccgacccctcctccgaccagaggatgagcgcc
acgggcttcgaggagaccgacctcacctaccaggtgtcggaggccgacggctgctcggag
gtcgccaaggatctgatcaaaccagcgttcaccatgtccaacttgcccggcaccacgcag
accacaccctcctcctcttcctcctcgtccacggtgtccatgcaggtgcagaccagtgcc
ccctcctggcagccgccctcctcctccaacgggacggtgctaaagacgtcgaccggtgtc
atgcttccgggaggcttcaccttgatgtcaggtgcctcgctgccccccggcacacacacc
atccccctcagccagctgcagggccagcctctggctatccagggccccgtggccccgggc
cccgctgccacgctacacgctccgcacacacagccgaccacgctgctccgcctccccgcc
accgtgtcactgtcaggaggcggagtctctcagcagctacagaccatccaggttcagccc
agcactcagcagacctccaccaatcagagcagctcagacatccacatccccgcctcctcc
gcagccggtcttcctgcctgcatcgtctcctcctcctcctcctcctcctcttcctcagtg
gcaggtcacatgatgtaccccggcggtcacacggtgatgtacgctgcaccgacgccctca
ctgggcgacggcagcctcactgtcctcaacacattccccccgacaggccacgcccagtca
catgaccccagcgccctcccgcaggtcttcctcacctcgctccctccggtcggcgctcag
atcccggtgtctgcagtccagctccatccgatggtgatcagtcagcagagcagcagcaac
ctgacggagctgcaggtcgtcagtctggacgtccaccaatcaaaagacgactga
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