Siniperca chuatsi (mandarin fish): 122873508
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Entry
122873508 CDS
T08948
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122873508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schu03009
]
122873508
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-60S particles
RNases
122873508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
122873508
NCBI-ProteinID:
XP_044046219
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Position
LG3:7174198..7183362
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AA seq
808 aa
AA seq
DB search
MEPSSAAATCNRTKRKNISLTSHEKAKRLKTVQEGEETPECVRSSCSPRISVLLDRLQQP
ITLNELMELLHYAALGKTGGIKQPSWCRLLHQKRIKAVNVVIVEGLTQSHFYKHYLTLRH
LRTSYTTRVTFTPSSTDLASGIFSSDIPESDGPSISQRHTESSELHKALRSHPVITKFGT
QRRGLTAYLLTQEEMIKRHYPVKGMPGFEGFVCTDSVDSVTDNSPLYGLDCEMCLTEKGN
ELARVSLVDSDGNCVLDDLVKPQNRILNYLTRFSGITAAMLRPITTTLRDVQVKLRALLP
SDAVLVGHSLNNDLIALKLIHQHVIDTSLLYRREFGQRFKLKVLAETVLKRQIQTEEKKG
HNSTEDAVAALELAQYFIKTGPLQVVELLLEELWGYTVVEESTDCAPAPTPSHRFADILQ
TLGRSVAFLGKRSDIALDLSNQLWHNSDKEVLASFRRQTKCPDLSVLQFSSFSDHLKRCL
PHQEQQYQRVCANLRDMCVVFAGPFPAGFSERKVRRLFCCCGPVRKIKMLNTTVRVHAEV
EFELLEGAMLALKTLNGLNMQEQSIQVRRPVYESMLDLDLTLEALMSDSLNTSHLYAVKL
NPSTAECIRISAKVNGHTLDANCSGITPVTTANGFPPAKVNGKRLQPTTTKSKLSEETVR
ETFGHFGTVERVVLLAKPGKLARHAYIKFESSEGKHAALSSSEDLRKENYLICPSLTPPH
LPSWVAVTTPVTTVDPDREAAEDEERTHMHTSSQDQEIDHMMRKLDRRLRKLFRSLPDGT
LSVVVLLGHTSAHGQLPGLCLMEVKQGS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcatcagcagcagcaacatgcaacagaacgaaaagaaaaaacatttccctc
acatcacatgagaaggccaagagattaaaaactgtgcaggaaggtgaggagacgccggag
tgtgtacgttcctcctgctcaccgaggatctctgtgctgctcgaccgccttcaacaacca
attacattgaatgagctgatggagctgctgcattatgctgctctggggaaaacaggtggc
attaaacagcccagttggtgtcgtctcctccatcagaagaggattaaagccgtgaatgtg
gtgatcgtggagggcctgacccagagtcacttttacaaacactacctcaccctgcgacac
ctcaggaccagctacaccactagggtcacctttactccatcatctaccgatctggcatca
ggaatcttcagtagtgatatccctgaatcggatggtccgtccatttcccaaagacacact
gaaagcagtgaattgcacaaagcactgaggagtcacccagtaatcactaagtttgggaca
cagaggagaggactgacagcgtaccttctcacccaggaagagatgatcaagagacactac
cctgtcaaaggaatgccaggctttgagggatttgtgtgcacagacagtgttgactctgtg
actgacaacagccctctgtatggacttgactgtgagatgtgtctaacagaaaagggaaat
gagttggctcgtgtttctttggtggatagtgacgggaactgtgtgctggacgatttggtg
aaacctcagaaccgaatcctcaactacctcaccaggttctctggtattactgcagcgatg
ttgcgaccaatcacaaccaccttgcgggacgttcaagtgaagctcagggcgttgttgccg
agtgacgcagttctggtgggccattcacttaacaacgacctcatagctctgaaactgatc
caccagcatgtaatcgacacctcgttgctgtacaggagagagtttggacagaggtttaaa
cttaaggtgctggcggagacagtgctgaagaggcaaatacaaaccgaagagaagaagggt
cataattccactgaggatgctgtggcagccctggagctggctcagtactttattaaaaca
ggacctcttcaggttgtagaacttctactggaggagctgtggggatatacagtagtggag
gagtccactgactgtgcacctgcacccacaccaagtcacaggtttgctgacatactacag
acacttggccggtcagtagcctttttagggaagcgctctgacatcgccctggatctgtcc
aatcagctgtggcacaactctgacaaagaggtgttggcctctttcaggcgacagaccaag
tgtccggacctctcagtgctccagttttcttccttctcagaccatctgaagaggtgccta
cctcatcaggagcagcagtaccagagggtgtgtgcaaaccttcgagatatgtgtgtagtg
tttgccgggccgttccctgcaggtttctctgagaggaaagtgaggcggctcttttgttgc
tgcggaccggttcggaaaatcaaaatgttgaacacaactgtcagggtacatgcagaggta
gagttcgagctgctggagggagctatgttggctttaaaaactttgaatggactcaatatg
caggaacagtccatccaggtccggaggcctgtttatgagtcaatgctggacttggatctg
actcttgaggctttgatgagtgacagtctcaacaccagtcacctctacgctgttaaatta
aaccccagtacggctgagtgcatacgaatttctgcaaaggtcaatggacacacgttagat
gcaaactgttcaggtattactcctgttacaacagcgaacgggttccccccagctaaagta
aacggtaaacggttgcagcccaccaccacaaagtctaaactgtctgaggagacggtcaga
gagacatttggtcactttggtacagtggagagagttgtcctgcttgccaaacctggaaaa
cttgcaagacatgcatacataaagtttgagagttcagagggcaaacatgcagccctcagc
tcctctgaggatctccggaaggaaaactacctcatctgtccatccctaactccaccccac
ttaccgtcatgggttgctgtgacaacgccagtcaccacagtggatcctgacagggaagca
gcagaagacgaggagaggacccacatgcacaccagttctcaggaccaggaaatcgatcac
atgatgaggaagttggaccgccgcctgcggaaactcttcagatctctcccagacggcacc
ttgtctgtggttgttctgctcggacacaccagtgctcatggccagcttcctggtttgtgc
cttatggaggtcaagcaagggtcttga
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