KEGG   Siniperca chuatsi (mandarin fish): 122873508
Entry
122873508         CDS       T08948                                 
Name
(RefSeq) RNA exonuclease 5-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122873508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:schu03009]
    122873508
Ribosome biogenesis [BR:schu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    122873508
SSDB
Motif
Pfam: RRM_1 RNase_T DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-GeneID: 122873508
NCBI-ProteinID: XP_044046219
LinkDB
Position
LG3:7174198..7183362
AA seq 808 aa
MEPSSAAATCNRTKRKNISLTSHEKAKRLKTVQEGEETPECVRSSCSPRISVLLDRLQQP
ITLNELMELLHYAALGKTGGIKQPSWCRLLHQKRIKAVNVVIVEGLTQSHFYKHYLTLRH
LRTSYTTRVTFTPSSTDLASGIFSSDIPESDGPSISQRHTESSELHKALRSHPVITKFGT
QRRGLTAYLLTQEEMIKRHYPVKGMPGFEGFVCTDSVDSVTDNSPLYGLDCEMCLTEKGN
ELARVSLVDSDGNCVLDDLVKPQNRILNYLTRFSGITAAMLRPITTTLRDVQVKLRALLP
SDAVLVGHSLNNDLIALKLIHQHVIDTSLLYRREFGQRFKLKVLAETVLKRQIQTEEKKG
HNSTEDAVAALELAQYFIKTGPLQVVELLLEELWGYTVVEESTDCAPAPTPSHRFADILQ
TLGRSVAFLGKRSDIALDLSNQLWHNSDKEVLASFRRQTKCPDLSVLQFSSFSDHLKRCL
PHQEQQYQRVCANLRDMCVVFAGPFPAGFSERKVRRLFCCCGPVRKIKMLNTTVRVHAEV
EFELLEGAMLALKTLNGLNMQEQSIQVRRPVYESMLDLDLTLEALMSDSLNTSHLYAVKL
NPSTAECIRISAKVNGHTLDANCSGITPVTTANGFPPAKVNGKRLQPTTTKSKLSEETVR
ETFGHFGTVERVVLLAKPGKLARHAYIKFESSEGKHAALSSSEDLRKENYLICPSLTPPH
LPSWVAVTTPVTTVDPDREAAEDEERTHMHTSSQDQEIDHMMRKLDRRLRKLFRSLPDGT
LSVVVLLGHTSAHGQLPGLCLMEVKQGS
NT seq 2427 nt   +upstreamnt  +downstreamnt
atggagccttcatcagcagcagcaacatgcaacagaacgaaaagaaaaaacatttccctc
acatcacatgagaaggccaagagattaaaaactgtgcaggaaggtgaggagacgccggag
tgtgtacgttcctcctgctcaccgaggatctctgtgctgctcgaccgccttcaacaacca
attacattgaatgagctgatggagctgctgcattatgctgctctggggaaaacaggtggc
attaaacagcccagttggtgtcgtctcctccatcagaagaggattaaagccgtgaatgtg
gtgatcgtggagggcctgacccagagtcacttttacaaacactacctcaccctgcgacac
ctcaggaccagctacaccactagggtcacctttactccatcatctaccgatctggcatca
ggaatcttcagtagtgatatccctgaatcggatggtccgtccatttcccaaagacacact
gaaagcagtgaattgcacaaagcactgaggagtcacccagtaatcactaagtttgggaca
cagaggagaggactgacagcgtaccttctcacccaggaagagatgatcaagagacactac
cctgtcaaaggaatgccaggctttgagggatttgtgtgcacagacagtgttgactctgtg
actgacaacagccctctgtatggacttgactgtgagatgtgtctaacagaaaagggaaat
gagttggctcgtgtttctttggtggatagtgacgggaactgtgtgctggacgatttggtg
aaacctcagaaccgaatcctcaactacctcaccaggttctctggtattactgcagcgatg
ttgcgaccaatcacaaccaccttgcgggacgttcaagtgaagctcagggcgttgttgccg
agtgacgcagttctggtgggccattcacttaacaacgacctcatagctctgaaactgatc
caccagcatgtaatcgacacctcgttgctgtacaggagagagtttggacagaggtttaaa
cttaaggtgctggcggagacagtgctgaagaggcaaatacaaaccgaagagaagaagggt
cataattccactgaggatgctgtggcagccctggagctggctcagtactttattaaaaca
ggacctcttcaggttgtagaacttctactggaggagctgtggggatatacagtagtggag
gagtccactgactgtgcacctgcacccacaccaagtcacaggtttgctgacatactacag
acacttggccggtcagtagcctttttagggaagcgctctgacatcgccctggatctgtcc
aatcagctgtggcacaactctgacaaagaggtgttggcctctttcaggcgacagaccaag
tgtccggacctctcagtgctccagttttcttccttctcagaccatctgaagaggtgccta
cctcatcaggagcagcagtaccagagggtgtgtgcaaaccttcgagatatgtgtgtagtg
tttgccgggccgttccctgcaggtttctctgagaggaaagtgaggcggctcttttgttgc
tgcggaccggttcggaaaatcaaaatgttgaacacaactgtcagggtacatgcagaggta
gagttcgagctgctggagggagctatgttggctttaaaaactttgaatggactcaatatg
caggaacagtccatccaggtccggaggcctgtttatgagtcaatgctggacttggatctg
actcttgaggctttgatgagtgacagtctcaacaccagtcacctctacgctgttaaatta
aaccccagtacggctgagtgcatacgaatttctgcaaaggtcaatggacacacgttagat
gcaaactgttcaggtattactcctgttacaacagcgaacgggttccccccagctaaagta
aacggtaaacggttgcagcccaccaccacaaagtctaaactgtctgaggagacggtcaga
gagacatttggtcactttggtacagtggagagagttgtcctgcttgccaaacctggaaaa
cttgcaagacatgcatacataaagtttgagagttcagagggcaaacatgcagccctcagc
tcctctgaggatctccggaaggaaaactacctcatctgtccatccctaactccaccccac
ttaccgtcatgggttgctgtgacaacgccagtcaccacagtggatcctgacagggaagca
gcagaagacgaggagaggacccacatgcacaccagttctcaggaccaggaaatcgatcac
atgatgaggaagttggaccgccgcctgcggaaactcttcagatctctcccagacggcacc
ttgtctgtggttgttctgctcggacacaccagtgctcatggccagcttcctggtttgtgc
cttatggaggtcaagcaagggtcttga

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