KEGG   Siniperca chuatsi (mandarin fish): 122873522
Entry
122873522         CDS       T08948                                 
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
  KO
K07207  tuberous sclerosis 2
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04115  p53 signaling pathway
schu04140  Autophagy - animal
schu04150  mTOR signaling pathway
schu04218  Cellular senescence
schu04910  Insulin signaling pathway
schu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122873522 (tsc2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122873522 (tsc2)
  09143 Cell growth and death
   04115 p53 signaling pathway
    122873522 (tsc2)
   04218 Cellular senescence
    122873522 (tsc2)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    122873522 (tsc2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122873522 (tsc2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:schu01009]
    122873522 (tsc2)
Protein phosphatases and associated proteins [BR:schu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122873522 (tsc2)
SSDB
Motif
Pfam: Tuberin DUF3384 Rap_GAP
Other DBs
NCBI-GeneID: 122873522
NCBI-ProteinID: XP_044046240
LinkDB
Position
LG3:complement(23957496..23985463)
AA seq 1902 aa
MNKQPSKESLRDKVKGIFGLGPPRPPSKQSENKLSEFIITTDIIKELHPDCGLSNRVRTM
NHVCDLAKSKKFEEHAVEAVWKAVEDMLSPEQPPEARHAVLQLLRAIIQGQGERLGPLRA
YFFKVIRDYQPCNEDLSDRLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSIMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQTIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIHSLHRLMEKFFRNETRGVIRIKVLHILSFVLSTNRQLY
EDELIEVVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLV
FSGPLEVPERDPIAESPMEDVRTAILGLLEILQSKLYSLPASHASRVYELLISHLQLHYK
NKYCSAIASSIRLQVFDFFLMMRADSLHRLGVPNKDRAMRFSPYCYCDTGEPEKRVSEKK
PAGTTSPPAGSPAPPTAPSTTTASIRSAYLPYAPAFGVLLQCLKMETDWKVLKLVLDKLP
WTLQYKVLLLTSPCSLDQLCSTLCCMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTAIT
SYHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLSALIVKLTHIS
ATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIA
MWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSSFRARSTSLNERPKSLRAAKVAK
AAAAVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMQTSTTTCSLGSADENAMTQA
DEGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITT
SGGVKTQALLGLDMAERLKVGGEMTRSDPSLHTRITKEAPAKLESQSSQQHNRATRIRVR
SMSGGHALRAGPAQSLSPLVSPSEGELAAPLSPPSASTLDSLGPPSSTSATPSAPPSLKD
NPSLAEFLPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSSVLMAME
GVKEPPTQTASAPASTAAPAPAPFSEPLTQTHSSVGGKANLIQRSNTVSGSLWSLGLGSA
PPGPPAPGRLHRSISWADSVVVLEEGSGVSTAHTPSDWQESEEFEAMTSDPIFMSADKFT
KTPPPGTLSRSSSTSSQDDEKSTLEEVSEGAIPIDQPTLGPSTPGSQGPELPFQTHTQSQ
GHGLNKSSSSPELQTLPEAFSKAAMESETVPGDTLWPKTPSDSKPQPQQPHFEKEKVEGS
TGGDVNGLRSQSQGGEGPGVVSSQSGGARMRLEFPAAVPQPGPISPSGGHRPRGHTISVS
APSSRRERRTERDSYHSRPGPSNTEKISGLSPSFVFLQLYHSPFFGNEANKPLLLPKTQV
IDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVAILSNEYGSNRYAAFLTGLGKLIHLKD
CDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFHIATLMPNRESDKGCCNKKRHIGNDFV
MVVYNDSGEEYKLGTIKGQFNFVEVIIKPLDYECNLVTLQCRKDLEGLVDTTVAKIVSDR
NLPLLVRQMALHANMASLVHQYRANPSDAYASKWLARLRHIKRIRTRAQEDIQARSTPGI
SLTQGHTQQNKSFQQCTPAPNHEVSGQRKRLVSTVDDFTDFV
NT seq 5709 nt   +upstreamnt  +downstreamnt
atgaataaacaaccaagcaaggagagtctcagggacaaggtgaaggggatctttgggctg
ggacccccgcggccaccaagcaaacagagtgaaaacaaactgtccgagtttatcattacg
actgacatcatcaaggagctccatccggactgcggtctgagcaaccgtgttcgcacgatg
aaccacgtctgtgatcttgccaaatcaaaaaaatttgaggagcatgcagtggaggcagta
tggaaagccgtggaggacatgctgtctccagagcagccacctgaggccagacatgctgtc
ctgcagctgctgagggccattatacagggacagggtgagcgtctcggccctctgagagcc
tactttttcaaggtgatcagagactaccaaccatgcaacgaggacctctctgataggttg
gaagtcttcaaggccttaacagagaatgggaaagacatcacatacctggaggaggacata
gcacgctttgtcctcctgtggatggacataggtctcacctccgactttcttcatgttctc
gtaaatctggtgaagttcaacagctgctacctggaccaaaatgtctccatcatggtccag
aaaatctgtctcctgtgcaatagaacaacatcttcaacagatattgaggtggcactacaa
gtactggatgcagtggtgtgttacaactgcctgccctcagactctctcactgtcttcatc
atcacactttgtcgtactgtcaatgtcaaggagttttgtgaatcctgctggaagttgatg
aggaaggtgttggggactcacctcggccacagtgccatttacaccatgtgccgtataatg
gaggagagggtatacatggaggatgcaccattgttgagaggagctgtattctttgttgga
atggcactgtggggtgcacacagactccctgccctcaaaaacacacctacacttgttctg
ccctctttctacaaggccatgtcgtgtgccaatgaggtggtgtcctatgaaatcgtcctc
tccatcaccagactaatcaagaagtatggcaaggagctgcaggtggtcacctgggacatc
ctgctgggaatcatagagcgactgctgcagcagatccagacaataggcagtgcggagttg
aaggccatcgtgtatgagctgttgaccacagtggaggagctgtatgagcagaacggttac
cacggctccacagagaagttcttcagtctggtggagaaatgtgctgacaaacgacctgat
gcatcagtgctgaccctcatctcgtacagggcccagtctatccagccagccaaggatggc
tggattcacagccttcaccgtctcatggagaaattcttcaggaatgagactcgcggtgtg
ataaggatcaaagtgcttcatatcctgtccttcgttctcagtaccaaccgacagctttac
gaggatgagctgattgaagtggtggtgatcccccagctcagtgggatagctgaagaccgg
gacctggccgtcagaaaacaggccacccagctactggtggaccttgctgagggctgcaac
acacaccacttcaccagcctgctggacatcattgagcgggtggccagtcgctctctggtg
ttctcagggcccctggaggttcctgagagagaccccatagcagagtctcctatggaagat
gtcaggactgctatactgggcctgctggaaatcctgcagagcaagctttacagcctacca
gccagtcatgctagtcgtgtgtatgagttgctcatcagccacctgcagcttcactacaag
aacaagtactgttcagctatcgcttccagtattagactacaggtgtttgactttttcctg
atgatgcgagcggactctcttcaccgtctcggagtccccaacaaagacagggctatgagg
ttcagcccttactgctattgtgacacaggggagccagagaagcgtgtgagtgaaaagaag
cctgcaggtacaacatctcctcctgctggcagccccgctccccccactgctccttccact
acaacagcctccatacgctcagcctacctgccctacgcacctgccttcggtgtcctcctg
cagtgcctcaagatggagacagattggaaggtgctgaagctggttctcgacaagctgccg
tggacgctgcagtacaaagtgctgctgctcacgtcaccatgcagcttagaccaactctgt
tctacactctgctgcatggtgacggatcggctgatctcagagcgcttgaagaagacccca
gaggggttttctcgcaccgatgttcagctggcagtggttcctgtcctcacagcgatcacc
tcctaccataactacctggagcagtcgagacagagagagctggttcagtgcctcgagacc
ggcctcatttaccgctgtgccaaacagtgtgtggtggctcttacaatgtgcacggtggag
atgcctgacatcatgatcaagctcctctctgctcttatcgtcaaactcacccacatctct
gcaaccgttgccatggcatctcctatgcttgagttcctctccactctggtgcgcctgccc
catctttatgccaactttgtagctgaacagtatgtcagtgtgtttgccatctctctaccc
tacactaacccttccaagttcaaccagtacattgtgtccctggcccaccatgtgatcgcc
atgtggttcatacgctgcagactcccctttcgcaaggactttgttcagtacatcacaaag
ggtttacgttccaacgccctactgccattcgatgatggtcatgagcaaagttcatttcgt
gctcgaagcaccagcctcaatgaaaggcccaagagtctgcgggcagcaaaagtggcgaag
gcggcagcggcggtagccaatagcagcagctctccagttaaagagctgagggacctgtca
gccatggacgcgttccgctcccgcagcatcagtgtctccgaacatgcggtccgcaggatg
caaacctcaaccaccacctgcagtctgggttccgctgatgaaaacgcgatgactcaggca
gacgaggggctgaagactgtccacctggagctcacggagacctgtctggacatgatggca
cgatatgtcttttccaacttttccgccctgcccaagaggtctcccatcgcagagttcctt
ttggcagggggtcgcagtatgacttggctggtgggcaacaagctggtgaccataacaacc
agcggaggggtcaaaacgcaagcgctgctgggcctggacatggctgaacggctgaaagta
ggaggagaaatgacaaggtcagatccatcattgcacacccgaataaccaaagaggctcca
gccaaactggagtcacagtcaagccagcagcacaacagagccacacgcatacgggtccgc
tccatgtcaggcggccacgctctacgtgccggtcctgcacagagtctcagtcctctggtg
tccccctctgagggcgagttagctgctccgctctctcccccctctgcatccaccctggat
agtctgggtcctccttcctccacctctgccaccccgtctgctcccccatctctcaaagac
aaccccagcctggctgagtttctccccatgcttacacagggctgggcagagatcttcata
cggagaccatctggtaacacaagctggctgatgtgtctggagaacccacccagtcccttt
tcctcggagctcggcaacatgccgctgcaggagctctccagtgtcctcatggccatggag
ggagtgaaggagcctcctacccagacagccagcgctcccgccagcactgctgctcctgca
ccagcccccttctccgagcccctaacccaaacacacagcagtgtcggagggaaggcaaac
ctgatccagcggtccaacaccgtgagtggctctctctggtctctgggtttgggctctgcc
cccccaggccctccagcccctggcaggttgcacaggagcatttcctgggcagactctgtg
gtggtgctggaggaggggtcaggggtctccacagcacacaccccgtctgattggcaagag
agtgaagagtttgaggcaatgacgtctgatcccatctttatgtctgcggacaagttcaca
aagaccccgccgcctggaacgctcagcaggtcgtcctccacctccagtcaagatgatgaa
aagtcaacgctggaggaagtaagcgagggagcgattcccatcgatcagcccactcttgga
ccctccaccccaggcagccaggggcccgagcttcccttccagacccacactcagtcccag
ggacatggacttaacaagtccagttcctctcctgagctccaaaccttacctgaagccttc
tccaaggccgctatggagtcagagactgtaccaggagacacattgtggcccaaaacacct
tctgacagcaagcctcagccccagcagcctcattttgagaaagagaaggtggagggaagc
acaggaggggacgttaatggactgcgaagtcagagtcaagggggtgaaggcccaggtgta
gtgtcatctcaaagtggaggagcaaggatgaggttggagtttccagcagcggtgccacaa
cctggacccatctcccccagcggaggccaccgaccccggggtcacaccatctcagtatca
gccccctcctccaggagggagaggaggacagagagggactcgtaccacagtcgacccgga
cccagcaatacagagaagatctctggactgagccccagctttgtcttcctccagctgtat
cactctcctttctttgggaatgaagccaacaagccactgctgctgcccaaaactcaggtg
attgaccgtgctgtgaaggttctggaccagatgcctccctatgacacccataagatcgga
gtggtgtttgtaggagctggtcaggttaacaatgaggttgccatcctgtcaaatgagtat
ggttcgaaccgctacgctgccttcctaacaggcttgggcaagttaatccatctgaaagac
tgtgaccccgaccagatcttccttggagggctcgaccagtatggtgacgacggagagttc
acctactgctggcatgacgacatcatgcaggctatcttccacatagccacactgatgcca
aacagggagagcgacaaaggctgttgcaacaaaaagcgtcacatcggcaacgattttgtc
atggtggtgtataatgactctggagaggagtacaaactgggcaccattaagggtcagttt
aactttgtagaagtcattataaaaccactggattatgaatgtaacctggtcacactccag
tgccgcaaagacctggaagggttagtagacacaacggtggcaaaaattgtttcagaccgc
aaccttccactcttagtcagacagatggctctgcatgcaaatatggcctctttggttcat
cagtacagagccaacccctctgatgcttacgcctctaagtggctagcaagattacgacac
attaagaggatcaggaccagggcccaagaagacattcaggctcgttcaactcctggcatc
tctctcacccaagggcacactcaacagaacaagtcttttcagcagtgcactccagcaccg
aaccatgaagtttctgggcaaaggaaaaggcttgtttcaactgtggatgatttcacagat
tttgtttaa

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