Siniperca chuatsi (mandarin fish): 122873522
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Entry
122873522 CDS
T08948
Symbol
tsc2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04115
p53 signaling pathway
schu04140
Autophagy - animal
schu04150
mTOR signaling pathway
schu04218
Cellular senescence
schu04910
Insulin signaling pathway
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122873522 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122873522 (tsc2)
09143 Cell growth and death
04115 p53 signaling pathway
122873522 (tsc2)
04218 Cellular senescence
122873522 (tsc2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
122873522 (tsc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122873522 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122873522 (tsc2)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122873522 (tsc2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
122873522
NCBI-ProteinID:
XP_044046240
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All DBs
Position
LG3:complement(23957496..23985463)
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AA seq
1902 aa
AA seq
DB search
MNKQPSKESLRDKVKGIFGLGPPRPPSKQSENKLSEFIITTDIIKELHPDCGLSNRVRTM
NHVCDLAKSKKFEEHAVEAVWKAVEDMLSPEQPPEARHAVLQLLRAIIQGQGERLGPLRA
YFFKVIRDYQPCNEDLSDRLEVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSIMVQKICLLCNRTTSSTDIEVALQVLDAVVCYNCLPSDSLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERVYMEDAPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMSCANEVVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQTIGSAELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIHSLHRLMEKFFRNETRGVIRIKVLHILSFVLSTNRQLY
EDELIEVVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVASRSLV
FSGPLEVPERDPIAESPMEDVRTAILGLLEILQSKLYSLPASHASRVYELLISHLQLHYK
NKYCSAIASSIRLQVFDFFLMMRADSLHRLGVPNKDRAMRFSPYCYCDTGEPEKRVSEKK
PAGTTSPPAGSPAPPTAPSTTTASIRSAYLPYAPAFGVLLQCLKMETDWKVLKLVLDKLP
WTLQYKVLLLTSPCSLDQLCSTLCCMVTDRLISERLKKTPEGFSRTDVQLAVVPVLTAIT
SYHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLSALIVKLTHIS
ATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLAHHVIA
MWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGHEQSSFRARSTSLNERPKSLRAAKVAK
AAAAVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMQTSTTTCSLGSADENAMTQA
DEGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLVTITT
SGGVKTQALLGLDMAERLKVGGEMTRSDPSLHTRITKEAPAKLESQSSQQHNRATRIRVR
SMSGGHALRAGPAQSLSPLVSPSEGELAAPLSPPSASTLDSLGPPSSTSATPSAPPSLKD
NPSLAEFLPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSSVLMAME
GVKEPPTQTASAPASTAAPAPAPFSEPLTQTHSSVGGKANLIQRSNTVSGSLWSLGLGSA
PPGPPAPGRLHRSISWADSVVVLEEGSGVSTAHTPSDWQESEEFEAMTSDPIFMSADKFT
KTPPPGTLSRSSSTSSQDDEKSTLEEVSEGAIPIDQPTLGPSTPGSQGPELPFQTHTQSQ
GHGLNKSSSSPELQTLPEAFSKAAMESETVPGDTLWPKTPSDSKPQPQQPHFEKEKVEGS
TGGDVNGLRSQSQGGEGPGVVSSQSGGARMRLEFPAAVPQPGPISPSGGHRPRGHTISVS
APSSRRERRTERDSYHSRPGPSNTEKISGLSPSFVFLQLYHSPFFGNEANKPLLLPKTQV
IDRAVKVLDQMPPYDTHKIGVVFVGAGQVNNEVAILSNEYGSNRYAAFLTGLGKLIHLKD
CDPDQIFLGGLDQYGDDGEFTYCWHDDIMQAIFHIATLMPNRESDKGCCNKKRHIGNDFV
MVVYNDSGEEYKLGTIKGQFNFVEVIIKPLDYECNLVTLQCRKDLEGLVDTTVAKIVSDR
NLPLLVRQMALHANMASLVHQYRANPSDAYASKWLARLRHIKRIRTRAQEDIQARSTPGI
SLTQGHTQQNKSFQQCTPAPNHEVSGQRKRLVSTVDDFTDFV
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaccaagcaaggagagtctcagggacaaggtgaaggggatctttgggctg
ggacccccgcggccaccaagcaaacagagtgaaaacaaactgtccgagtttatcattacg
actgacatcatcaaggagctccatccggactgcggtctgagcaaccgtgttcgcacgatg
aaccacgtctgtgatcttgccaaatcaaaaaaatttgaggagcatgcagtggaggcagta
tggaaagccgtggaggacatgctgtctccagagcagccacctgaggccagacatgctgtc
ctgcagctgctgagggccattatacagggacagggtgagcgtctcggccctctgagagcc
tactttttcaaggtgatcagagactaccaaccatgcaacgaggacctctctgataggttg
gaagtcttcaaggccttaacagagaatgggaaagacatcacatacctggaggaggacata
gcacgctttgtcctcctgtggatggacataggtctcacctccgactttcttcatgttctc
gtaaatctggtgaagttcaacagctgctacctggaccaaaatgtctccatcatggtccag
aaaatctgtctcctgtgcaatagaacaacatcttcaacagatattgaggtggcactacaa
gtactggatgcagtggtgtgttacaactgcctgccctcagactctctcactgtcttcatc
atcacactttgtcgtactgtcaatgtcaaggagttttgtgaatcctgctggaagttgatg
aggaaggtgttggggactcacctcggccacagtgccatttacaccatgtgccgtataatg
gaggagagggtatacatggaggatgcaccattgttgagaggagctgtattctttgttgga
atggcactgtggggtgcacacagactccctgccctcaaaaacacacctacacttgttctg
ccctctttctacaaggccatgtcgtgtgccaatgaggtggtgtcctatgaaatcgtcctc
tccatcaccagactaatcaagaagtatggcaaggagctgcaggtggtcacctgggacatc
ctgctgggaatcatagagcgactgctgcagcagatccagacaataggcagtgcggagttg
aaggccatcgtgtatgagctgttgaccacagtggaggagctgtatgagcagaacggttac
cacggctccacagagaagttcttcagtctggtggagaaatgtgctgacaaacgacctgat
gcatcagtgctgaccctcatctcgtacagggcccagtctatccagccagccaaggatggc
tggattcacagccttcaccgtctcatggagaaattcttcaggaatgagactcgcggtgtg
ataaggatcaaagtgcttcatatcctgtccttcgttctcagtaccaaccgacagctttac
gaggatgagctgattgaagtggtggtgatcccccagctcagtgggatagctgaagaccgg
gacctggccgtcagaaaacaggccacccagctactggtggaccttgctgagggctgcaac
acacaccacttcaccagcctgctggacatcattgagcgggtggccagtcgctctctggtg
ttctcagggcccctggaggttcctgagagagaccccatagcagagtctcctatggaagat
gtcaggactgctatactgggcctgctggaaatcctgcagagcaagctttacagcctacca
gccagtcatgctagtcgtgtgtatgagttgctcatcagccacctgcagcttcactacaag
aacaagtactgttcagctatcgcttccagtattagactacaggtgtttgactttttcctg
atgatgcgagcggactctcttcaccgtctcggagtccccaacaaagacagggctatgagg
ttcagcccttactgctattgtgacacaggggagccagagaagcgtgtgagtgaaaagaag
cctgcaggtacaacatctcctcctgctggcagccccgctccccccactgctccttccact
acaacagcctccatacgctcagcctacctgccctacgcacctgccttcggtgtcctcctg
cagtgcctcaagatggagacagattggaaggtgctgaagctggttctcgacaagctgccg
tggacgctgcagtacaaagtgctgctgctcacgtcaccatgcagcttagaccaactctgt
tctacactctgctgcatggtgacggatcggctgatctcagagcgcttgaagaagacccca
gaggggttttctcgcaccgatgttcagctggcagtggttcctgtcctcacagcgatcacc
tcctaccataactacctggagcagtcgagacagagagagctggttcagtgcctcgagacc
ggcctcatttaccgctgtgccaaacagtgtgtggtggctcttacaatgtgcacggtggag
atgcctgacatcatgatcaagctcctctctgctcttatcgtcaaactcacccacatctct
gcaaccgttgccatggcatctcctatgcttgagttcctctccactctggtgcgcctgccc
catctttatgccaactttgtagctgaacagtatgtcagtgtgtttgccatctctctaccc
tacactaacccttccaagttcaaccagtacattgtgtccctggcccaccatgtgatcgcc
atgtggttcatacgctgcagactcccctttcgcaaggactttgttcagtacatcacaaag
ggtttacgttccaacgccctactgccattcgatgatggtcatgagcaaagttcatttcgt
gctcgaagcaccagcctcaatgaaaggcccaagagtctgcgggcagcaaaagtggcgaag
gcggcagcggcggtagccaatagcagcagctctccagttaaagagctgagggacctgtca
gccatggacgcgttccgctcccgcagcatcagtgtctccgaacatgcggtccgcaggatg
caaacctcaaccaccacctgcagtctgggttccgctgatgaaaacgcgatgactcaggca
gacgaggggctgaagactgtccacctggagctcacggagacctgtctggacatgatggca
cgatatgtcttttccaacttttccgccctgcccaagaggtctcccatcgcagagttcctt
ttggcagggggtcgcagtatgacttggctggtgggcaacaagctggtgaccataacaacc
agcggaggggtcaaaacgcaagcgctgctgggcctggacatggctgaacggctgaaagta
ggaggagaaatgacaaggtcagatccatcattgcacacccgaataaccaaagaggctcca
gccaaactggagtcacagtcaagccagcagcacaacagagccacacgcatacgggtccgc
tccatgtcaggcggccacgctctacgtgccggtcctgcacagagtctcagtcctctggtg
tccccctctgagggcgagttagctgctccgctctctcccccctctgcatccaccctggat
agtctgggtcctccttcctccacctctgccaccccgtctgctcccccatctctcaaagac
aaccccagcctggctgagtttctccccatgcttacacagggctgggcagagatcttcata
cggagaccatctggtaacacaagctggctgatgtgtctggagaacccacccagtcccttt
tcctcggagctcggcaacatgccgctgcaggagctctccagtgtcctcatggccatggag
ggagtgaaggagcctcctacccagacagccagcgctcccgccagcactgctgctcctgca
ccagcccccttctccgagcccctaacccaaacacacagcagtgtcggagggaaggcaaac
ctgatccagcggtccaacaccgtgagtggctctctctggtctctgggtttgggctctgcc
cccccaggccctccagcccctggcaggttgcacaggagcatttcctgggcagactctgtg
gtggtgctggaggaggggtcaggggtctccacagcacacaccccgtctgattggcaagag
agtgaagagtttgaggcaatgacgtctgatcccatctttatgtctgcggacaagttcaca
aagaccccgccgcctggaacgctcagcaggtcgtcctccacctccagtcaagatgatgaa
aagtcaacgctggaggaagtaagcgagggagcgattcccatcgatcagcccactcttgga
ccctccaccccaggcagccaggggcccgagcttcccttccagacccacactcagtcccag
ggacatggacttaacaagtccagttcctctcctgagctccaaaccttacctgaagccttc
tccaaggccgctatggagtcagagactgtaccaggagacacattgtggcccaaaacacct
tctgacagcaagcctcagccccagcagcctcattttgagaaagagaaggtggagggaagc
acaggaggggacgttaatggactgcgaagtcagagtcaagggggtgaaggcccaggtgta
gtgtcatctcaaagtggaggagcaaggatgaggttggagtttccagcagcggtgccacaa
cctggacccatctcccccagcggaggccaccgaccccggggtcacaccatctcagtatca
gccccctcctccaggagggagaggaggacagagagggactcgtaccacagtcgacccgga
cccagcaatacagagaagatctctggactgagccccagctttgtcttcctccagctgtat
cactctcctttctttgggaatgaagccaacaagccactgctgctgcccaaaactcaggtg
attgaccgtgctgtgaaggttctggaccagatgcctccctatgacacccataagatcgga
gtggtgtttgtaggagctggtcaggttaacaatgaggttgccatcctgtcaaatgagtat
ggttcgaaccgctacgctgccttcctaacaggcttgggcaagttaatccatctgaaagac
tgtgaccccgaccagatcttccttggagggctcgaccagtatggtgacgacggagagttc
acctactgctggcatgacgacatcatgcaggctatcttccacatagccacactgatgcca
aacagggagagcgacaaaggctgttgcaacaaaaagcgtcacatcggcaacgattttgtc
atggtggtgtataatgactctggagaggagtacaaactgggcaccattaagggtcagttt
aactttgtagaagtcattataaaaccactggattatgaatgtaacctggtcacactccag
tgccgcaaagacctggaagggttagtagacacaacggtggcaaaaattgtttcagaccgc
aaccttccactcttagtcagacagatggctctgcatgcaaatatggcctctttggttcat
cagtacagagccaacccctctgatgcttacgcctctaagtggctagcaagattacgacac
attaagaggatcaggaccagggcccaagaagacattcaggctcgttcaactcctggcatc
tctctcacccaagggcacactcaacagaacaagtcttttcagcagtgcactccagcaccg
aaccatgaagtttctgggcaaaggaaaaggcttgtttcaactgtggatgatttcacagat
tttgtttaa
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integrated database retrieval system