Siniperca chuatsi (mandarin fish): 122873557
Help
Entry
122873557 CDS
T08948
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4a isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
schu04144
Endocytosis
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122873557 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122873557 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
122873557 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122873557 (nedd4a)
04121 Ubiquitin system [BR:
schu04121
]
122873557 (nedd4a)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122873557 (nedd4a)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122873557 (nedd4a)
Membrane trafficking [BR:
schu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122873557 (nedd4a)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
HECT type E3
122873557 (nedd4a)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
122873557 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
122873557
NCBI-ProteinID:
XP_044046337
LinkDB
All DBs
Position
LG1:18373072..18400173
Genome browser
AA seq
1253 aa
AA seq
DB search
MASRLRLHFASRRSNTDPLSESLSSHGEESGVSVPARSPAEILAHSSVHLKVTPLSPDYA
NLQRYSSVFIPRVNTGRGNKKSILQILLQPCGKLSGELDGSIEDGDPGGSEGGAGSGSDG
GSCSSSMASDAGYCSSNSIFEPEASEKHRTTQERSLLCRKSKVPLRRCSSLVIFSKSPCS
TPPASPVSPVALSPAKGSHQSSLQTSATEFSQDDEEVTCKGSTTTAVCGHRLPKGSCSAE
FRDTKHMVQFNIPLQDEPKCKMEDRSKVMELSSTLDRSNRHSSSVLLHFAHQRPMIPGKG
AATTATVNVGHPEAPNPAAHSEGEHDPRKKLYRSTSACLFSSTKPLEKNQKVCSSGKGQE
RPEENHCHRAIQRSFSLEVPYPNTGISCHVSNPKFSSPCSPHVHIHLSPCCPAKLPSSVT
DVNTSLKGNNTPKSPGQNTKTRDDFLGQVDVPLNQIPTENPNTERPYTFKDFLLHPRSHK
SRVKGHLRLKMTYLPKNSGSEEETADQTEDTDPGWEFLEAQDMSGPRQSQLLPALPPGWE
ERQDNLGRTYFVNHESRTTQWQRPTMQDSGVEMQRTQNNNMDVEHAFNTRRQISDHDENS
TRESPESWEIITEDESTLYHSGNQQLGSPPPCMPVPEFHSVSDELRNIHLSGATAGELRT
SQTDHTSNSSHSSLRGSARTSTGEEHPVNPVLLPTSAGLPAGWEEKRDSKGRRYYVNHNS
RTTSWTRPLVQKTSEAAAAPSGSGLPQSPPPSQPPVPPEESPQHTPSPEATYESGFLPAG
WEVRSAPSGRPFFIDHNTKTTTWEDPRLKIPVHMRRRASLDPSDLGPLPPGWEERVHTDG
RIFYIDHNTRTTQWDDPRLQNSAITGPAVPYSRDYKQKYDYFRKKLKKPADIPNRFEMKL
RRNAMLEDSYRRILSVKRADLLKARLWVEFEGEKGLDYGGVAREWFFLMSKEMFNPYYGL
FEYSATDNYTLQINPNSGLCNEDHLTYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQK
PITLQDMESVDSEYFNSLMWILKNDPTDLDLRFTIDEELFGQTHQHELKPGGTEIVVTND
NKKEYIHLVMQWRFVNRIQKQMTAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVND
WRENTKYKNSYCSNHVVIQWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGP
QLFTIEQWGTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcggctgcgcttgcatttcgcgtcaaggagaagcaacactgaccctctgtca
gaaagcctcagcagccatggtgaggagagtggagtcagtgtgccagctcgtagccccgca
gagattctggcgcacagttctgtccacttgaaggtgactcctctgtcaccagactatgct
aatttacagcggtactcttcagtattcatacccagggttaacactggaaggggtaataag
aagagcattctgcagatcttgctgcagccctgtggaaagctcagtggagagctggatggc
agtatagaggatggagacccggggggcagtgaaggaggagcaggtagtggctctgacgga
ggctcgtgcagcagcagcatggccagcgatgctgggtactgtagcagcaacagcatcttt
gagccagaggcttcagaaaagcacaggaccacccaggagaggagtctactctgccgcaag
tccaaggtcccgctgagacggtgctcctccttggttatattttcaaagagcccctgcagc
accccacctgcttccccagtcagtccagtggctctctcaccagcgaaggggtctcatcag
tcgtctcttcagacatctgccactgaattctcacaagatgatgaggaagtgacttgcaaa
gggtccaccaccacggcagtatgtggccatcgtctcccaaaaggaagctgttcagccgag
ttcagggacaccaaacacatggtgcaatttaatattcctttacaggatgaaccaaaatgc
aaaatggaggacaggagtaaagtaatggaactgtcatcaactctagacagatcgaatcgt
cactctagcagcgtgctgctgcactttgcccaccagagaccaatgatacccgggaaggga
gctgcaacaacggctacagtcaatgtgggacatcctgaggctcctaacccggccgcacac
tctgagggtgaacatgaccctcgcaaaaaactgtatcgtagtacctctgcttgtttgttc
tcctcaactaaaccattagagaaaaaccaaaaggtctgttcatcaggaaaaggccaggaa
aggcctgaggaaaaccattgtcatcgcgcaatccaaaggagtttttccctggaggtgccc
taccctaacactggaatttcatgtcacgtttcaaatccaaaattcagtagcccttgctct
ccacatgtgcacattcatttgtctccttgttgcccagctaaattgcctagctctgttact
gatgtaaacacaagcctcaaagggaataatacgccaaagagcccaggtcaaaacaccaag
acacgtgatgactttttgggacaggtggacgtccccttaaatcagataccgacagaaaat
cctaatacagaaaggccatacacattcaaggattttctgcttcacccacgaagccacaag
tccagagtcaaaggtcacctgcgtctcaaaatgacctacctgcccaaaaactcaggttca
gaggaggaaacagcagatcagactgaggacacagatcctggttgggagtttctggaggct
caggacatgtcaggtcccagacaaagccagctgctgccagctctgccccctggctgggag
gagcggcaggacaacctgggaagaacctactttgtcaatcatgagagcagaaccacacag
tggcaacgacccacaatgcaggacagtggtgtggagatgcaaagaacacagaacaataat
atggatgtggagcatgctttcaatacacgcagacagatctcagaccacgacgaaaacagc
acacgagaatctcctgagagctgggagatcattacagaggacgagtccaccttgtaccac
agcggtaaccagcagctcggatcacctcccccctgcatgcctgtgccggagttccactcg
gtcagcgacgagctgagaaacattcatctttcaggggccacagctggcgagctgcgcacc
tctcagacagatcacactagtaattcaagccattccagtcttagaggaagtgcccggact
tcaacgggagaggaacatcctgttaatcctgtgctgcttccaacctcagctgggctgcct
gcaggctgggaggagaagcgagacagtaaaggaagacgctactatgtcaaccacaacagc
cgaaccacttcgtggacacgaccccttgttcagaaaacctcagaagcagcagcagcaccg
agtggttcaggtttaccccagagcccccctccgtcccaaccgcctgtcccccctgaggag
tctcctcagcacaccccaagccccgaggccacatatgaatctggcttcctgccggctggt
tgggaggttcgcagtgctcccagtggaagaccctttttcatcgaccacaacacaaagact
actacctgggaagatcccaggctaaagattcctgtgcacatgaggaggagagcctcactt
gacccatctgatctcggccctctgccacctggttgggaagagagggtccacactgatggg
aggatattctacatagatcacaacaccaggaccacacaatgggatgatcccagattacag
aactcagctataactggaccagcagtgccttattccagagattataaacagaagtatgac
tacttccggaagaagctgaagaaaccggctgacatcccaaaccgttttgagatgaagctg
agacgaaatgcaatgctggaggactcatacagacgcatcctctcagttaagagggcagac
ctgctgaaggcacgactgtgggtggagtttgagggagaaaagggactggactatggtggc
gtggccagggaatggttcttcctcatgtccaaggagatgttcaacccgtactacggactg
ttcgagtattctgccacggacaactacacgctgcagattaaccccaactcgggtttatgt
aatgaggaccacctgacctacttcaagttcatcggccgcgtggcgggcatggctgtgtat
catggcaaactgctcgatgctttcttcatccggcctttctacaagatgatgctgcagaag
ccgatcactctccaggatatggagtctgttgacagtgaatatttcaactcattgatgtgg
attttgaagaacgacccaacggacttggatttgaggttcaccattgacgaagagctgttt
ggacagactcaccagcatgaactcaagccaggcggcaccgagattgtggtcactaatgac
aacaagaaggaatacatccatctggtgatgcagtggaggtttgtgaacaggatacaaaag
cagatgactgcctttaaagagggattctttgagttgataccacaagatctgatcaagatc
tttgatgagaatgagctcgagctgctcatgtgtggtcttggagatgtggatgtgaatgac
tggagagagaacaccaagtacaagaacagttactgctccaaccacgtcgttatccagtgg
ttttggaaaacggtgctgttgatggatgcagaaaagcgaatccggctcttacagtttgtg
acgggaacatcaagggtcccaatgaatggctttgctgaactctatgggtctaacgggcca
cagctgttcaccatcgagcaatggggaacacgtgataaacttccccgagcccacacatgc
ttcaaccgactggaccttcctccttatgagtcttttgaggagctgagggagaaacttcat
atcgccatcgagaatgcacaaggcttcgacggggtggattag
DBGET
integrated database retrieval system
