Siniperca chuatsi (mandarin fish): 122873610
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Entry
122873610 CDS
T08948
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04020
Calcium signaling pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122873610 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122873610 (grin2bb)
04082 Neuroactive ligand signaling
122873610 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122873610 (grin2bb)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Glutamate (ionotropic)
122873610 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122873610
NCBI-ProteinID:
XP_044046475
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All DBs
Position
LG3:complement(17667716..17763535)
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AA seq
1768 aa
AA seq
DB search
MFKGRHLHSSTMLVSLHPSPSRLQDKRFVFPSSSPHPPPPPPDQPSHHPYSQSRLTLPFL
SLSFSLLLVSILLLPICESRRGGGPGTGPGGAPGGQGGQRGGGTQRGVVIPPQYSPGLPA
LPPISPKLISSLSIAVILVGNSSEVALGVGLEKEDFLHIPYPPKVEVVTMNETDPKSIIN
RICAQMTRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDHSMF
FQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEVL
LLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGFTWIVPSLVA
GDADHVPSVFPTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLLKSSCLG
TPDKKSSNTGHSKEILKYLMNVTFEGRNLSFSEKGHQMFPKLVVILLDNERQWDRVGKWE
RGSLTMRYHVWPRFELYSGAEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQ
LKLNNQTGDSGIYIKRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGMVG
EVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVW
VMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVP
VQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFSP
PFRFGTVPNGSTERNIRNNYRDMHTYMTSFHQKNVDEALYSLKTGKLDAFIYDAAVLNYM
AGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEEFEALWLTG
ICHNEKNEVMSSQLDVDNMAGVFYMLGAAMILSLLTFICEHLFYWQLRFCFMGVCSGKPG
FTFSISRGIYSCIHGVQIEENKSTIDSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGIN
GSPHAALEYSHSGRDSAIYDIQEHRRSLVGHPVDCKPAPPYLPEDNMFSDYISEVERTFG
NLPLKDSNLYQDHYLHHHPASALGMSGPPPNRPRSLGSASSLEGGMFDCDSLGGGVAPIF
TTQPRPSMTHRNTNKFDLIAGHTPADSNQVGFKGNNVYGRFSFKGGASSTGLIGGHDRYC
GGGGGGSGGDDGNIRSDVSDISTHTVTYGNLEGNNKRRKQYRDSLKKRPASAKCRREQDE
IELSGLRRRAHHHTVHHHFPHGPQAHRTVSPPLERKRGGGGGNSSPYLFRKDKENLRDFY
ADQFRSKEGKAKWEQEGGSGGSGVGGGSGGGICKSLVPVEDFLKSKGKKPECKGGLGIVS
AGQQAHTCWEKGVSGIGGGGIAGGDWECRNCHSVCHHGGGIGGGSTCPASGVGGSSSRPS
SASCKRCDSCKIQPSNLYNISEDNNMVFAGGKSSVGPSQTQTQAQRRKLGPGGRVLRRQH
SYDTFVDLQREGAGRMGGVGGGVGGQFPQPRSVSLKDKDRFMEGPSPYAHMFERYAGERE
SSMFGGIGGDRAKGGSSFSLFRGGESGLHQRSVGERDLRDRDRAMMGGGGCGGGDGGGSR
GAGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKPYYIKKPQTQQQQQQQQLLNNSRG
GGDFRSSMGVTSYLPASATAGVMSNVAPRFPKELCLGGVGGPMGNHHGASKLLPVGRDTL
GLGQGQRPFNGASNGHVYEKLSSIESDV
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacactcctccacaatgcttgtcagcctccacccttctccc
tcccgtcttcaggacaagcgcttcgtcttcccctcctcctccccccatcctcctcctcct
cctccagaccagccctctcatcatccttattctcagtctcggctgaccctgcccttcctc
tccttgtctttctctctgctcctcgtctccatactcctcttgcccatctgcgagtctcgc
aggggtggaggtccagggacagggcctggaggtgccccagggggacaaggtggccagcgg
ggaggcggcacccagaggggtgttgtcatccctcctcagtactctcctggcttaccggct
cttcccccaatcagtcccaaactgatcagctcactcagtattgctgtcatcctggtgggc
aactctagtgaagtagccctgggagttggacttgagaaagaggacttcctccacatccct
taccctcccaaagtcgaggtggtcaccatgaatgagaccgaccccaagagtatcatcaat
cggatctgcgcacaaatgacaaggaactctctgcaaggtgtagtgttcggcgacgacacg
gaccaggaggccatcgcacagatcctggatttcatctctgcccagacacacatcccaatc
ctgggcatcaggggaggctcctccatggtcatggctgccaaggacgaccactccatgttt
ttccagtttggtccgtccatcgagcagcaggcctctgtcatgttgaacatcatggaggag
tatgactggtacatcttctccatagtcaccacgtactaccctggctaccaggactttgtc
aacaaggtccgcagtaccatcgacaacagctttgtgggctgggagctcgaagaagtcctc
ctactggacatgtcagtggatgacggagactccaagatccagaatcagctaaagaaactg
cagagtcctgttattctgctttactgcacaaaggaggaggctaccactatcttcgaggtg
gcccattctgtgggcctcacaggttatggcttcacctggatcgtgccctcgctggtggct
ggagatgcagaccatgttccctctgtcttccccacagggcttatctcggtgtcatatgac
gaatgggactacaacatcgaggccagggtacgtgatgcagtggctgtcattgccacggcg
acctccaccatgatgctggaccgggggccacacaccctgctgaagtcaagctgcctcggg
acacctgacaaaaagagctccaacaccggccactccaaggaaatactaaagtacctcatg
aatgttacatttgaaggcagaaacctgtcatttagtgaaaagggtcaccagatgttcccc
aaactggtcgtcattcttctagacaacgagagacaatgggacagggttggcaagtgggag
agaggctctttgacgatgaggtaccatgtatggccccgcttcgagctgtattcaggagcg
gaagagcgggaggaccacctgtccatcgtgactctggaggaggcgccatttgtcattgtg
gaggacgtggacccgctcagcgggacctgcatgagaaacactgtgccgtgccgcaaacag
ctcaaactcaacaatcagacaggtgattcagggatttacatcaagcgctgctgcaaaggt
ttctgtattgacatcctgaagaagatcgccaaggcggtgaagttcacttacgacctctac
ctggtcaccaacggcaaacacggcaagaaggttaatgggacatggaacggcatggttgga
gaggtggtgttgaagaatgcccacatggcagtgggttcgctcaccatcaacgaggagagg
tcagaggtcattgacttctctgtgcccttcattgagacggggatcagtgtcatggtctcc
cgtagcaacggaaccgtctccccctccgcttttcttgagccgttcagtgctgatgtctgg
gtgatgatgtttgtgatgttgctgatcgtgtcggccgtggctgtgtttgtgtttgagtac
ttcagcccggtgggttacaatcgctgtctggcagatggccgagagcccggcggtccctcc
ttcaccatcggtaaggccgtctggctgctttggggtctggttttcaacaactctgttccc
gtgcagaatcccaaaggcaccaccagtaagatcatggtgtcagtgtgggccttcttcgct
gtcatcttcctggcctcctacactgccaacctggctgcctttatgatccaggaggagtat
gttgaccaggtgtcgggtctgtcagacaaaaagttccagaagcctaacgaattctcgcca
ccattccggtttggcacggtgcccaatgggagtacagagcgcaacatccgcaacaactac
cgggacatgcatacttacatgaccagcttccaccagaagaatgtagatgaagcgctgtac
agtctgaagaccggcaaactggatgccttcatctacgatgctgcagtgctgaactacatg
gcgggcagagatgagggctgtaagctggtcaccatcgggagcggcaaggtgttcgcctcc
accggctacggcatcgccatccagaaggactcgggctggaaacgagctgtggatctggcc
atcctcatgctgtttggagatggtgagatggaggagtttgaggccctgtggttgacgggc
atctgccacaatgagaagaacgaggtgatgagcagtcagctggacgtggacaacatggcg
ggggttttctacatgctcggggctgccatgattctgtcattactcaccttcatctgtgaa
catttgttctactggcagctgcgcttctgcttcatgggcgtgtgctccggaaagcccggc
ttcacattctctattagcagaggtatctacagctgcatccatggggtacaaatcgaggaa
aacaagtcaaccatagattcaccctcggccaccatgaagaagaacatgaacaacacccac
tccaacatcctgcggttgctccgcactgccaaggacatgaccgctgtcccgggcattaac
ggctctccgcacgccgctctggagtatagccacagcggtcgtgactcggctatctatgat
atccaggaacaccggcgcagcttggtgggtcaccctgtagactgcaagccagcgccgccc
tacctgccagaggacaacatgttcagtgactacatcagcgaggtggagaggacttttggc
aacttgcccctgaaggacagcaacctgtaccaggaccattacctgcaccaccacccggcc
tcggctctgggtatgtccggccccccgcctaataggccgcgtagcttaggcagcgctagc
tcgttggaggggggcatgttcgattgcgacagtttagggggaggtgtagcacccatcttc
accacccagccccgcccctccatgactcacaggaataccaataaatttgacctgattgct
ggccacacccctgcggattccaaccaggttgggttcaagggaaacaatgtgtacgggagg
ttttctttcaaaggaggcgcatccagcacggggctcatcgggggtcatgacaggtactgt
ggtgggggtgggggaggctcagggggtgatgatgggaacattcgctctgatgtttcggat
atctctacgcacactgtcacctacggcaacctggagggcaacaacaaacggcgtaagcag
tacagggacagcctgaaaaagaggccagcctcggccaagtgcagacgggagcaggacgag
atagagctgagcggcttgaggaggagagcccaccaccacaccgtccaccaccacttcccc
cacgggccccaggcacaccgcacggtctcacctcccctggagcggaagaggggaggagga
gggggtaattcttcaccttacttgttccgcaaagacaaagagaacctgagggatttctat
gcggaccagttccgctccaaggagggcaaggccaagtgggagcaagagggtggaagtgga
ggaagcggcgtgggcggtggtagtggtggtggtatctgtaaaagcttagtacctgtagaa
gacttcctcaaaagtaaaggcaagaagccggagtgtaaaggtgggcttggcatagtgtcg
gcagggcagcaggcccacacctgctgggagaagggggtttctgggataggaggggggggc
atagcagggggtgactgggagtgtcgtaactgccacagtgtgtgtcaccatggtggaggc
ataggaggaggcagcacatgcccagctagcggggttgggggtagcagcagtcgccccagc
tccgctagctgcaaacgctgtgactcctgtaagatccagccaagcaacctttacaacatc
agcgaggataataacatggtgttcgctggagggaagagtagcgtaggacccagccaaaca
caaactcaggctcagcgcaggaagctagggccaggtgggagggtgttacggaggcagcac
tcatatgacacatttgtggacctgcagagggagggggcaggccggatgggaggggttggt
gggggtgttggggggcagtttccccagccccgaagtgtgagcttaaaagacaaagaccgc
ttcatggagggccccagcccttatgctcacatgtttgagaggtatgcaggtgaaagggag
tcttccatgttcggaggaataggcggggatagggcgaaaggaggctcctccttcagtttg
ttccgtggaggcgaaagtgggttgcatcagcggtcggtgggggagagagacctgagggac
agagatagagctatgatgggaggtgggggctgtggtggtggtgatggtggtggtagcaga
ggggccgggacttactccttgtctaaatctctctacccagataaggtgaaccagaacccc
ttcatcccaaccttcggcgatgaccagtgtctattacacggtgccaaaccgtactacatc
aaaaagccacagacgcagcaacagcagcagcagcagcaacttctcaacaacagccgagga
ggaggggacttccgcagctccatgggagtgacttcttatttgcccgcgtccgccacagct
ggggtgatgtccaatgtggcccccaggttccccaaagagctgtgtctgggcggggtggga
gggcccatggggaaccaccacggggccagcaagctactgcctgtgggcagggacacgtta
ggtttggggcagggacagagacccttcaacggtgccagcaatggacacgtttatgaaaag
ctctccagcattgagtcagacgtctga
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integrated database retrieval system
