Siniperca chuatsi (mandarin fish): 122873698
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Entry
122873698 CDS
T08948
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122873698 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122873698 (sart1)
04121 Ubiquitin system [BR:
schu04121
]
122873698 (sart1)
Spliceosome [BR:
schu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122873698 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
122873698 (sart1)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122873698 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
122873698
NCBI-ProteinID:
XP_044046693
LinkDB
All DBs
Position
LG3:9829012..9831899
Genome browser
AA seq
772 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEERRREHKKHRHKDRDRDASDRDGTRDKEKRKRSRDRSGRESRS
KGEKSSGEPRVKKEKVDLGYEESNTQVGPQSASGDASLSIEETNKLRAKLGLKPLELNEN
KKELGTKEDPMVAETINPVLIAQQKEMREKLAAMKEKRIQNQKLGKVKTLAEDDWLDNTS
AWVERSRTLAKEKEMAEKRAKLLEEMDEEFGVSSLVEEEFAQSKKDAYSSHDLKGLKVQH
KVDSFNEGQTVILTLQDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEES
VDDMVTFKTRSVLSKYDEEIEGEKKKSFRLNTGGFADGERERELQAMREALRNQAQSLEM
PALAIASEYYTPQEMVGFKKTKRRVKKIRKREKKTAADELVIDDTRSTDFGSRTRGRGRR
QVDDDSEEVKEEEENTLPHDIPQMSDDIRMAEMDISDDEDFTPSEPAVLEEDEAEQELQK
QLEKQRKLRQKQLLKDSGEKVAEQVKVLDDGNNENDPEKKNNIVFNATSEFCRTLGDIPT
YGLSGNREDQEDIMDFEQEEEKDDAGDSDSEMDENVGWSTVNLDEEQKQPDFSTASATIL
DEEPIVNSGLAAALLLCKNKGLLDTQMQKIARVRAPKGALPNDNYCIEDKMGFDDKYSRR
EEYRGFTQDFKEKESYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMK
KLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctccaagaaacacaaggaaaagagccgcgacaaggacacagaagagcgccgt
cgcgaacataagaaacatcgccacaaggaccgagacagagatgcttcagaccgggatggg
actcgggataaagagaaacgaaaacggtccagggacagaagcggacgggagagccgcagc
aaaggtgaaaaaagcagcggggagccacgagtgaagaaggagaaggttgatcttggatat
gaagaaagcaatacacaagtggggcctcagtctgcaagcggagacgcatctctcagcatt
gaggagacaaacaaactcagagccaagctgggtctgaagcctctggaattaaatgagaac
aagaaggagctcgggaccaaagaggatccaatggtagctgagaccatcaaccctgttctc
attgcacagcagaaagagatgagagagaagcttgccgcaatgaaagaaaaacgcatccag
aaccagaaactgggaaaagtcaaaaccctagcagaggatgactggctggataacacatct
gcttgggttgagagaagcagaacgctggcaaaagaaaaagaaatggcagagaaaagagcc
aaacttctggaagagatggatgaggagtttggtgtcagcagtctggttgaggaggagttt
gctcaaagcaaaaaggatgcctactcatctcacgatctaaagggactcaaagtacagcac
aaggtggattccttcaatgagggccagactgtcatcttgaccctgcaagacaaaggtgta
cttgaagaggaggaagatgtgctcgtaaatgtgggactggtggacaaggaaaaagcagaa
aagaatgtggagttaaaaaagaaaaagccggattacaagccctatgaagaagaggagagt
gtggatgacatggttacatttaagacccgctctgttctgtcaaagtatgatgaggaaatt
gagggtgaaaagaaaaagagtttccggttgaatacagggggctttgcagatggggagcga
gagcgggagcttcaggccatgagagaggctctacgaaatcaggcccagtccttggaaatg
cctgctcttgctatcgcctctgagtattacacacctcaggaaatggtgggctttaaaaag
acaaaacgccgcgtgaagaagatccggaagagggagaagaagacagctgcagatgaactt
gtcatcgatgacactcgcagcactgattttggctccaggacacgtggtcgaggccgcaga
caggtggatgacgacagtgaggaagtaaaggaggaggaggaaaacacattgccacacgat
atcccacaaatgtctgatgacatcagaatggcagaaatggacataagtgacgacgaagac
tttacaccttctgagccagctgttcttgaggaggatgaggcagagcaggagctgcagaaa
caactggagaagcagaggaagctgaggcaaaagcagcttctcaaagactctggggagaag
gtggcagagcaggttaaagtgcttgatgacggcaacaatgaaaatgatcctgagaagaag
aacaacattgttttcaacgccacctcagagttttgcagaactctgggtgatattccaact
tatgggctgtcaggcaaccgagaggaccaagaagacattatggactttgaacaggaagaa
gagaaagatgatgctggagattcagactcagaaatggatgagaatgttggatggagcaca
gttaacttggatgaagagcagaaacaaccagatttctccacagcctctgccactattttg
gatgaagagcccattgtcaactccggcctagctgctgccttgctcttgtgcaaaaacaaa
ggtctattggacacccaaatgcagaagatagcccgtgtcagagcaccaaaaggcgcctta
cccaatgacaactattgcatcgaggacaagatgggctttgatgacaagtacagtcgccga
gaagaatacagaggcttcactcaagatttcaaggagaaggagagctataagcctgacgtc
aagattgagtatgtggatgaatctgggcggaaactgactccaaaagaagctttcaggcag
ctttcacatcggttccatgggaaagggtctggaaagatgaagacagagaggaggatgaaa
aagctggaggaagaggcactgctgaagaagatgagcagcagtgatactcctcttgggact
gtggctttgcttcaagagaagcagaaatctcagaaaacgccatatattgtgcttagtggg
agtgggaaaagtatgaatgcaaacaccatcaccaaataa
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