Siniperca chuatsi (mandarin fish): 122873704
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Entry
122873704 CDS
T08948
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122873704
Membrane trafficking [BR:
schu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122873704
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
RA_3
Lpg0393_VPS9
Motif
Other DBs
NCBI-GeneID:
122873704
NCBI-ProteinID:
XP_044046711
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All DBs
Position
LG3:complement(29652073..29699985)
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AA seq
996 aa
AA seq
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MASSTPPGNPPSGLTDRTGSFFKLIDTFALEIGELKKEMVQTSPTVDKEPMDLQGLESEV
SGVYLQPPHCSGVGGERDSGYDSLRRRMSVLDRLTQTHPVWLLLAVSEEEASRILLKQPP
GVFLVRKSAALQRKVLSVRLKEDQSGTPISHFPVRESQYTFSLEGSGISFADLFRLVAFY
CISRDVLPSTLKLPEAIASAKTQKELEEVAQLGTGFWDSALCSQRRTSPRPCRPLSRTLS
PQRTNKNREVEGSQQRHAGAHCDSAPPTLRSHAPPPSFRLERRHSSGPLCFVNPLFLQTH
HHHHHCEDELPSHAVKSDNNVDNAGKASVKPLSSSQGSEQHVDKIKLNGKSQSPPLAPSP
RSMPRRRPAPPPPGPPAATTRPKSMPEAFAVSVRQQQSPSRRPAPARPPMGAKHSSPSKT
ASSPIPVPSNPPPPRPKKPDMEAHRCHNALDDETIAKALSRAKLPPCKPSPAVPADVLLE
KSAGNPSIPNERGHQRLSDMSMSTSSSDSLEYSQSPGFSLGLAPSPSRHLNHQDPVEDSS
EDDEDGEEEEEEDYGVGLETDLEMRLRPSFKARRRRVGVSLSGGSFILPRALKGRFRKVS
GMLSSLMTPERRAVKRIAELSRDKTSYFGSLVQDYISFVQENRGCHTSGMDFLQTVRQFM
TQMKAYLRQSSELDPPIESLIPEDQIDQVLEKAMHKCVLKPLKSVIEVALHDFQVSSGAL
QQLRENLALAKTKKPQELGVDGAVPPDPVAIEKIRHKFLNMRKMYSPDKKVSLLLRVCKL
IYTIMQDNSGRMYGADDFLPMLTYVVAQCDMPQLDTEIQYMMELLDPSLLQGEGGYYLTS
AYGAMALIKNFQEEQAARVLSSEARNTLHQWHRRRTTQRSVPSVDDFQNYLRVALQEVGT
GCTAKTLVVHPYTTTEEVCSLCAYKFKIPDPEKYALFLVTEDTSQQLAPDTHPQRIKAEL
HSRPCAQIFHFLYRRVPNLNLCIPAVLHNRNCLHVE
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcacaccacctgggaatccccccagcggcctcacggacaggaccggtagc
ttctttaagctgattgacacatttgcgttggagattggggagctgaagaaggagatggtc
cagacctctccaacagttgacaaggagcccatggacctacaagggctggagagtgaagtg
agtggtgtttatctgcagccccctcactgtagcggggtggggggtgaaagggattctggg
tacgactccttgcggaggaggatgagcgtcttggacaggctaactcaaacccacccagtg
tggctgctgctggcagtcagtgaagaggaggccagtcgcatactgctcaaacagccacca
ggggtgttcctggtcaggaagtcagccgctctgcaaagaaaggttctgtctgtgcgtctg
aaagaggatcagtcaggaactcccataagccacttccctgtcagagagagccagtacacc
ttttctcttgagggatctgggatcagctttgcagatctgtttcgcctggtggctttctac
tgtattagcagggatgttctgccttccacactcaaactaccagaggccattgcatctgct
aagacccagaaagaactggaggaggtggctcagcttggcacaggcttctgggactctgcc
ctgtgcagtcagcgtcgcaccagtccccgtccctgtcgccctctgagccgtaccctcagc
ccccagcgaactaacaagaacagggaggtcgaggggtcacagcagagacacgctggggct
cactgcgacagtgcacccccgaccctacggtcccacgctcctccaccttcctttcgtcta
gagagaagacattccagtggtcctctgtgctttgtcaaccccctgtttctccagactcat
caccatcaccaccactgtgaggacgaactaccttcacatgctgtcaagtccgataacaac
gtagacaatgcggggaaagcatccgtgaagccattaagcagcagtcaaggtagcgagcag
cacgtggacaagatcaaactgaacggcaaatctcagtcccctcccctcgccccctcccca
cgctcaatgccacgccgtcgccctgccccacctccacctggacctccagcagctaccacc
agacccaagagcatgccagaggcctttgctgtgtctgtaagacaacaacagtcccccagc
cggcgcccagcacccgctcgaccaccaatgggtgccaagcatagcagcccatccaaaact
gctagctcaccaatccctgtcccttcaaacccaccacctccaaggcctaagaagcctgat
atggaagctcaccgctgccacaatgccctggatgatgagaccatcgccaaggctttgtcc
cgtgccaagcttccaccctgcaagccttcacctgctgtccctgctgatgtactactggaa
aaaagcgctgggaatccatccattcctaatgagaggggacaccagcggctcagtgacatg
agcatgtctacttcttcctctgactcactggaatattcacagtctcctggattctccctg
ggcctggcccctagcccatcccgacaccttaatcatcaagacccagtggaagacagtagt
gaagatgatgaggatggggaagaagaagaggaggaagactatggagtcggtctggagacg
gacctagaaatgcgcctccgtccatccttcaaagcacgccgccgaagggtcggtgtcagc
ctgagtggtggctcttttatcctccccagggccctgaagggacgcttccgcaaggtgagc
ggcatgctcagctccctcatgaccccagagagacgggcggtgaaaaggatcgctgagctg
tccagggacaaaacttcatattttggctccctggtccaggactacatcagctttgttcag
gagaaccgaggctgtcacacatcagggatggattttctgcagactgtcaggcagtttatg
acacagatgaaggcttacctgcgccagagctctgagttggaccctcctatagagtcactc
atacctgaagaccagatcgaccaggtgctagagaaggccatgcacaagtgtgtcctaaag
cctctgaagagtgtgatcgaggtggctttacatgatttccaggtgagcagcggagctttg
cagcagctgagggagaacctggccctggccaagaccaagaagccccaggagctaggggtg
gacggagctgtgccccctgaccctgtggctattgagaagatccgccacaagttcctaaac
atgaggaagatgtactcccctgacaaaaaggtgtcactgctgctgcgcgtgtgtaaactc
atctacaccatcatgcaggataactcagggaggatgtacggtgccgatgacttcctgccc
atgctgacttatgtcgtggctcagtgtgacatgcctcagctggacacagagatccagtac
atgatggagctgctggacccatctctgctgcaaggagaggggggctactacctgaccagc
gcgtacggagccatggccctcatcaagaacttccaggaggagcaggcagcccgggtgctg
agctccgaggccaggaacactctgcaccagtggcaccgccggcgcaccacccagcgttca
gtgccgtccgtggacgactttcagaactatctccgtgtagcgctgcaggaagtgggcact
ggctgcacagccaaaaccctggtcgtccacccttacacaaccacagaggaggtctgctca
ctctgcgcttacaagttcaagatccccgaccctgagaaatacgcactgtttctggtcact
gaggacaccagccagcagcttgccccggacacacaccctcaacgaatcaaagccgagctc
cacagccggccttgtgcacagatcttccactttctctacaggagggtgcctaaccttaac
ctctgtattcctgccgtcttgcacaatagaaactgccttcatgttgaatag
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