KEGG   Siniperca chuatsi (mandarin fish): 122873722
Entry
122873722         CDS       T08948                                 
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
  KO
K10373  tropomyosin 1
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04260  Cardiac muscle contraction
schu04261  Adrenergic signaling in cardiomyocytes
schu04814  Motor proteins
schu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:schu00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    122873722
   04820 Cytoskeleton in muscle cells
    122873722
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    122873722
   04261 Adrenergic signaling in cardiomyocytes
    122873722
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:schu04812]
    122873722
   04147 Exosome [BR:schu04147]
    122873722
Cytoskeleton proteins [BR:schu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     122873722
Exosome [BR:schu04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   122873722
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ Crescentin TMF_DNA_bd DUF745 Lebercilin DUF3450 PUMA_CC ATG16 Laminin_I ERM_helical CENP-F_leu_zip DUF16 SlyX EzrA XhlA DUF1664
Other DBs
NCBI-GeneID: 122873722
NCBI-ProteinID: XP_044046753
LinkDB
Position
LG1:23637686..23649489
AA seq 284 aa
MDAIKKKMQMLKLDKENAMDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKSTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaacgccatggac
agagctgagcaggccgagtcagacaagaaagcagctgaggacaggagcaaacagcttgag
gatgacctggtagcactgcagaagaagctgaagtcaactgaggatgagttggacaagtac
tctgaagccctgaaggatgcccaggagaaactggagctcgctgagaagaaagccacagat
gctgagggtgatgtagcttccctgaacagacgtatccagctggttgaggaggagttggac
cgtgctcaggagcgtctggccacagctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtcattgaaaacagagcaatgaaggacgaggagaag
atggaactgcaggagatccagttgaaggaggccaaacacattgcagaggaggctgaccgc
aaatacgaggaggtggcccgtaagctggtgatcattgagagtgacctggaacgtacagag
gagcgtgctgagctgtctgagagcaaatgttctgagcttgaggaggagctgaaaaccgtg
cagaacaacctgaagtctctggaggcccaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttcttacagataagctgaaggaggctgagactcgtgctgag
ttcgctgagagatcagtcgccaagcttgagaagaccattgatgacctggaggatgagctg
tatgcccagaaactgaagtacaaggccatcagtgaagagctggaccacgccctcaacgac
atgacttccatctaa

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