Siniperca chuatsi (mandarin fish): 122873735
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Entry
122873735 CDS
T08948
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122873735 (chrna6)
04082 Neuroactive ligand signaling
122873735 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122873735 (chrna6)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122873735 (chrna6)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
122873735
NCBI-ProteinID:
XP_044046790
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Position
LG3:26341203..26365714
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AA seq
523 aa
AA seq
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MQPAARWTLLLVLVGLMAHNCFSSKAEDRLFRKLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLRWMPAEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRSVFLKVLPRIMLMRRPIDEDSRAGG
LDSSGEAGGAGGGGGGGGGKGGKKRKNSLMQQVGGGSLNCLEFGDSKLSSMEGCTGKKCP
CPCQHKKETPETPDMGKMTRQLSPQSISTVVAFSVMSPEIKQAIESVKYIAENMRSRNKA
KEVEDDWKYVAMVIDRIFLWVFVTVCVLGTVGLFLQPLCGFVS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggcggcgagatggactttgctgcttgttctcgtgggtttgatggcgcacaat
tgcttttcatccaaggcagaggaccggctgttcaggaaactgttccgaagatataaccag
ttcatcagaccagtggagaatgtctctgaccccgtcactgtggagttcgaggtctccatc
tcgcagcttgtcaaagtcgatgaggtgaatcagatcatggaaacaaatttatggctcaga
catatttggaatgactacaagctgcgatggatgccggcagagtttgacgggattgagttc
attagagttccatcaaacaagatctggagacctgacattgtgctctacaacaacgctgta
ggtgatttcctggtggaggataagaccaaggctctgctgaagtttgatggtaccatcacc
tgggttcctcccgccatttttaaatcctcctgcccaatggacatcacctacttccccttt
gactatcagaactgctctatgaagtttggctcctggacttatgacaaagccaagattgac
ctggtacttattgggtctaaggtgaacctgaaagacttctgggagagcggcgagtgggaa
atcattgacgctccaggctacaaacatgatatcaagtacaactgctgtgaggagatctac
ccagacatcacctactccttctacatccggcgcctgccactcttctacaccatcaacctc
atcatcccctgcctcctcatctctttcctcacagtgctggttttctatctcccgtctgac
tgtggagagaaggtcacgctctgtatctccgtcctgctctccctcactgtgtttctgctc
gttatcaccgagaccatcccctccacgtcactggtcatcccgctcattggagagtacctg
ctcttcacaatgatcttcgtcacactcagcatcgtcatcactgtgttcgtgctgaatgta
cactaccgcacgccaatgacccacactatgccgggttgggtgcgttctgtgtttctcaaa
gtgctgccgaggattatgctgatgcggagaccgattgacgaagacagcagggctgggggg
ttggacagcagtggggaggcaggaggagctggagggggaggaggaggcggaggagggaaa
ggagggaagaaaaggaagaacagcttgatgcagcaggttggagggggctccctcaactgt
ctggagttcggggacagtaagctctcgtccatggagggctgcactgggaagaaatgccct
tgcccctgtcagcataagaaggagaccccagaaacaccagacatggggaagatgacacgt
cagctgagtccacagagcatcagcacagtggtggccttttccgtgatgtcacctgagatc
aaacaggccatcgagagcgtcaagtatatagctgagaacatgaggagtcgcaacaaggcc
aaagaggtggaggatgactggaagtacgttgccatggtgatcgatagaatcttcctttgg
gtatttgtgaccgtgtgcgtcctgggaactgtgggcctcttcctccagcctctttgtggc
ttcgtctcataa
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