Siniperca chuatsi (mandarin fish): 122873769
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Entry
122873769 CDS
T08948
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2 isoform X1
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122873769 (chrnb5a)
04082 Neuroactive ligand signaling
122873769 (chrnb5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122873769 (chrnb5a)
Ion channels [BR:
schu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122873769 (chrnb5a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2754
DUF2417
ATP-synt_8
Motif
Other DBs
NCBI-GeneID:
122873769
NCBI-ProteinID:
XP_044046843
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Position
LG3:26312900..26328433
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AA seq
508 aa
AA seq
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MTTNTVLLLAILSLTSSRAENAEERLVNYLLGPERYNKLIRPAVNKSQQVTISIQVSLSQ
LISVNEREQIMTTNLWLFQEWNDYRLRWDPDKYEGIKKLRIPSKHIWLPDIVLYNNADGV
YEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVQHFPFDQQNCTLKFRSWTYDHTEVDLI
LTSDFASRDDFTPSGEWDIVSLPARKNEDPNDITYLDITYDFVIQRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFTMV
LVTFSIVSTVCVLNVHHRSPSTHHMPDWVKRFFLVRLPTCLFMRRPGSSNVRDKLRRKYG
NRSTVGKSNPQSDTEKKQYSNIRLGGIRTDTDSIYVNEDFAHKISWKVGDIPDGGGGFSD
FRSRLAVQWDADLEEAVDGVRYISEHMKTEDDDEGIIEDWKYVAMVIDRLFLWIFILVCV
VGTLGLFMQPLFQSYNTPTADDTEYGDF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaacactgttctcctgctcgccattctctctctcacaagcagcagggcagag
aatgcagaggagcggctggtgaactacctgttgggtccagagcgctacaacaaactgatc
agaccagctgtcaataagagccaacaggtcaccatctccatacaggtctctctgtctcag
ctcatcagtgtaaatgagagagaacagataatgacgaccaacttgtggctgttccaggag
tggaatgactacaggctgagatgggacccagacaagtacgaaggcatcaagaaattacga
ataccatccaaacacatctggcttcctgacatagtgctctacaacaatgcagatggcgtg
tacgaggtttccttctattgcaatgctgtggtctccaacacaggagacatcttttggctc
cccccggccatctacaagtctgcctgcgccatcgaggtgcagcacttccccttcgaccag
cagaactgcactcttaagttccgctcctggacctacgaccacacagaagtggatctaatc
ctcacgagcgactttgccagccgtgatgactttacaccaagcggagagtgggacatcgtc
tcgctcccggcgcgcaaaaacgaggaccccaatgacatcacctacctggatatcacatat
gattttgtgatccagaggaagccgctgttttacaccattaatctgatcatcccatgtgtg
ctgatcacatcgctggctatcctggtgttctacctgccgtcagattgcggggagaagatg
acgctgtgtatctcagtgctgctggcgctcactgtgttcctgctgctgatatcaaagata
gtgccacccacctctcttgcagtgccactcataggtaaatacttgatgttcaccatggtg
ctagtcactttctccattgtgagcaccgtctgtgtcctcaatgtgcaccaccgctcccca
tccactcaccacatgcccgactgggtcaaacgtttcttcttagtccgcctgcccacttgc
ctcttcatgaggcgtccaggctcttctaatgtccgcgataaactccgccggaagtacggc
aaccggagtactgttgggaaaagcaatccccagagcgacacagagaagaagcagtattcc
aacatcagacttggtgggatacgcacagacaccgactctatctacgtgaatgaggacttc
gcacacaagatttcctggaaggtgggcgacatcccagacgggggtggtggattttcagac
ttccggagccgtttggctgttcagtgggatgcagatctggaggaggcagtggatggagtg
agatacatctccgaacacatgaagacagaagacgacgatgaagggatcatagaagactgg
aagtacgtagccatggtgatagatcgtctgttcctgtggatcttcatcctggtgtgtgtg
gtgggaactctggggctcttcatgcagccgctattccaaagctataacacacccactgct
gatgacacagagtatggagatttctag
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