Siniperca chuatsi (mandarin fish): 122873885
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Entry
122873885 CDS
T08948
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122873885
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122873885
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122873885
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
RED_N
Motif
Other DBs
NCBI-GeneID:
122873885
NCBI-ProteinID:
XP_044047119
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All DBs
Position
LG3:25558450..25567187
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AA seq
656 aa
AA seq
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MRGGAFFGERDRDRGRDRPRFGAMSGRSGPPPMKFGNPGERLRKKRWNMDELPKFEKNFY
TEHPEVQHMSQYEMEEFLRKKEITIRGSGCPRAITAFHQAQFPQYVMDVLMQQNFKEPTA
IQSQGFPVALSGRDLVGIAQTGSGKTLAYLLPSIVHINHQPYLERGDGPICLVLAPTREL
AQQVQHVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKDVRQLAEDFLRDYVQ
INVGALELSANHNILQIVDVCMETEKDHKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
SSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQLVDSGR
GGGGGGGRMRYRDSSSNNPNLMYQAECDRRTRPGGGGGRKDSRSGYSRDSRNNRDGDHST
SSASSSYRDRSRDRRNSYNSGSDQCESYSSSRGYNSRSGGPSGGGGGQDQSSQPQGQFGQ
PPPPLPPPPPPSGGPQPLMAQQFAPPQPPLMSFIGQPPYAFASPPPLPPVPPPPRK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggtgccttctttggtgagagagacagggaccgcggacgagacaggccacgg
tttggggccatgagcggtcgcagtggacccccaccaatgaagtttgggaatccaggtgag
cgtctccgcaagaagaggtggaacatggacgagctgccaaaatttgagaagaacttctac
actgaacaccctgaggtccaacacatgagtcagtatgaaatggaagagtttctcagaaag
aaggagatcaccatcagaggctctggctgtccaagggcgatcaccgcttttcaccaggcg
cagtttccacagtatgtgatggatgtgctgatgcagcagaacttcaaggagccaacagcg
atccagtctcagggcttccctgtggccctgagcggcagggacctggtggggattgcacag
actggctccggaaagacactggcttatcttcttccttctattgtacacatcaaccaccag
ccctatctggagaggggagatggtccaatttgtctggtgctcgccccaaccagagagctg
gctcagcaagttcagcacgtcgcatatgactatggaaagtcttcccgtatcaaaagcacc
tgtgtctatggtggagcacccaaaggaccacagattcgagacctcgagaggggtgttgag
atctgtattgccacacctggtcgcctcattgacttcttggaggctgggaaaacgaacctg
cggcgctgcacctacctagtgctggatgaggctgaccgcatgctggacatgggctttgag
ccacagattcgcaagatagttgaacaaatcaggcctgacagacagaccctgatgtggagt
gctacctggccaaaggacgttcggcagcttgccgaggacttcctgagggactacgtccag
attaatgttggcgctctggagctcagtgccaaccacaacatcctgcagattgtcgatgtc
tgcatggagactgaaaaggaccacaaactttttcagctgatggaggagataatggctgag
aaagagaacaaaaccatcatctttgtggagactaagaagcgttgtgatgatcttaccagg
aggatgaggcgggatgggtggccagccatgtgtatccatggagacaagagccagccagaa
agagactgggtactcgcagaatttcgaagtggtaaagctcctatactgattgctaccgat
gtggcctctcgtggtctggatgtggaagatgttaagttcgtcatcaactatgactatccc
agctcctctgaggattatgtccatcgtattggacgtacggcccgcagtaccaacaagggc
actgcctacaccttcttcaccccagggaacttgcggcaggcccgagaccttgtccgggtg
ttggcggaggcccggcaggccatcaaccctaaactgcttcagcttgtggactcagggcgt
ggcggaggaggagggggtggcagaatgcgttaccgtgacagcagctccaacaaccctaac
ctcatgtaccaggcggagtgtgatcggcgcacgcgccctggtggtggaggcggcagaaaa
gacagccgcagtggctacagccgtgacagccgcaacaaccgtgatggagaccactccact
tcctccgcctcttcctcctacagggacagaagccgggatcgcaggaatagctacaactct
ggctcagatcagtgcgagagttacagcagcagcaggggctacaactcccgcagcggaggc
ccgtccggtggaggtggaggtcaggatcaatctagccagccgcagggtcagtttggccaa
cctcctcctcctcttcctcctcctcctccaccatcaggggggccgcagcctctgatggct
caacagtttgctccaccacagccaccgctcatgagcttcattgggcaaccgccttacgct
tttgcttctccaccccctcttcctccggtccctccacctccccggaagtag
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