Siniperca chuatsi (mandarin fish): 122873935
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Entry
122873935 CDS
T08948
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122873935 (rfx1b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Other basic domains
RF-X
122873935 (rfx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
122873935
NCBI-ProteinID:
XP_044047249
LinkDB
All DBs
Position
LG3:24031139..24044347
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AA seq
848 aa
AA seq
DB search
MATSGYSEDLQPQQANTVTIATPAATTPSSAKTAHFLSEIPPTSGTIASANQSATASKGQ
DALCSQAPPTQAQSQKAVVLTTPTQHYVTPDIQHSAVQKSNGQSSSPQYIIVTVTEGSVH
SNDSLSDSSPPAPGVPTQVVQPVQTTQQQRSVLQAVSQAAKRIQTGHINNLQSVHINQEV
EHVFSGQVQYVDGGGDATFTSPTIRSSNYPFSDSPLFSQTPPTSSSTYYEATPSSESDIT
GSVTSQPVSVATAGANSGGAAAGGGGYVIQGGYVLGGGGGAAAGGGGGGGQSYSSPNSRA
PPATVQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTR
RLGTRGNSKYHYYGLRIKSGSPLLRLMDEQQHMAMRQQPFSQKNSRIKPVQKTQGITNGT
SGGMGQQAAALCDISAQVQQYQQFLEASRPLPDFVDIDLQDQTLPDGILLEHLKAFQTLY
REHCEAILDVMVNLQFTLVETLWKSFWRFSQSSDTESLNLHDESEKRLPKSCLVVLCKFE
PVLQWTKECDNLLYQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMV
RIKVVCVCSFSQTLRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFTNVQEQASWVC
QCEDRVVQRLEQDFKMTLQQQNSLEQWATWLDGVVSQALKPYEHNPVALPKAAKVFLLNW
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTV
KSRISLDLEKEEEEDEEEESDDETGDLVLQSSSLSAVDEEKEPMEPPTKQPRTSLNLHTL
TETHSTPP
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttctggatactcggaggaccttcagcctcagcaggccaacacagtaaccata
gcaacacctgctgccaccacaccctcatccgcaaagacggcacacttcctgtccgagatc
ccaccaacctctggaaccatcgcatcagctaaccaatcagccacagcctcaaaaggacag
gatgcactttgttctcaagcgccgcccacccaggcccagagccagaaggcagtggttctg
accactcccacgcagcactatgtaacccctgacatccagcactctgcggtccagaagagt
aatggtcagagcagctcgcctcagtacatcatagtaactgtaacagagggctccgttcac
tccaacgacagtctgtcagactccagcccacctgcccctggtgttcctactcaggtggtc
caaccagtgcagaccacccaacagcagaggtcagtgttgcaagcagtgtcacaggcagcc
aagaggattcagactggccacatcaacaacctacagtctgtacacattaaccaggaggtg
gagcatgtgttctctggccaggtgcagtatgtggacggaggaggagacgcgacctttaca
tcacccaccattcgatcgagcaactaccctttctccgactcgcccctcttctcccagacc
cctcccacctcctcctccacctactacgaggccactcccagctctgagtcagacatcact
ggctcggtgacctcgcagccagtttctgtggcaacagcaggagccaatagcgggggagct
gctgcaggcggagggggctacgtaattcagggcggttatgtgttaggaggagggggagga
gctgcagcaggtggaggaggaggaggaggacagagttattccagccctaactctcgtgcc
ccacctgctactgtgcagtggctgtgtgataactatgagggggcggagggggtgagttta
cctcgctgcaccctctactaccactacctgctgcactgccaggagcagaaactagaacct
gttaacgctgcatcctttggcaaactcatcaggtctgtcttcatgggactacgtacacgg
agattagggaccagagggaactccaagtaccactactatggtctgaggatcaaatctggt
tcccctctgctcagactgatggatgaacaacagcacatggcgatgaggcagcagcctttc
tcacagaaaaacagtaggataaagccagttcagaagacacaggggatcaccaatgggaca
tcaggtgggatgggtcagcaggcggcggcactctgtgatatttcagcacaggtgcaacag
tatcagcagtttctggaggcatcaaggccactgccagactttgtggacattgatctgcaa
gatcaaaccctgcccgatgggatccttttggaacacctgaaggcctttcagactctctac
agagaacactgcgaggccattctggacgtgatggtcaaccttcagttcactcttgtggag
acactatggaaatccttctggaggttcagccagagcagtgacacagaatcactcaacctg
cacgatgagtctgagaagcgtctgcccaaatcgtgcctggtggtgctgtgtaagtttgaa
ccagtgctgcaatggacgaaagagtgcgacaacctgctctaccagactctggtggagatc
ctcatccctgatgtactgagacccatccctagtgccttaactcaggccatccgcaacttt
gccaagagtctggagaattggttgacaggagctatgatgaacatcccagaagagatggtt
cgcataaaggtggtgtgtgtatgctccttctcccagacactgcgccgctataccagcctg
aaccacctggcccaggcagcccgcgccgtcctccagaactcagcccaaatcaaccagatg
ctctcagacctcaaccgggttgatttcactaacgtgcaggagcaggcatcctgggtgtgt
cagtgtgaggaccgtgtggtacagcggctggagcaagactttaaaatgactttgcagcag
caaaactctctggagcagtgggctacctggctggatggtgttgtctctcaggccctaaag
ccctacgagcacaaccctgtcgccctaccaaaggctgccaaggtcttcctgctcaactgg
tctttctatagttctatggtaatccgggacctgactctgcgcagtgctgccagttttggc
tcctttcacctgatccgcttgctgtatgatgagtatatgtactacctgatagaacacagg
gtggcccaggctaaaggagtgacacccattgcggtcatgggagaatttgccagcaccgtc
aagagccgaatctctctggacctggagaaagaagaagaggaagatgaggaagaggagagc
gatgacgagaccggagatctggtgctgcagtccagctctctgagtgcggtcgatgaggag
aaggagccgatggagccgcctaccaagcagcccaggacgagtttaaatctgcacactctg
actgagacccacagcacacctccttag
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