Siniperca chuatsi (mandarin fish): 122874039
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Entry
122874039 CDS
T08948
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
schu04517
IgSF CAM signaling
schu04530
Tight junction
schu04810
Regulation of actin cytoskeleton
schu05100
Bacterial invasion of epithelial cells
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122874039 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122874039 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
122874039 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122874039 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122874039 (arpc1a)
05100 Bacterial invasion of epithelial cells
122874039 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122874039 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122874039 (arpc1a)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Arp2/3 complex
122874039 (arpc1a)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122874039 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_HPS5
Beta-prop_EML
RMC1_N
Rax2
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
122874039
NCBI-ProteinID:
XP_044047467
LinkDB
All DBs
Position
LG3:8092606..8102731
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDSGTLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccacgcgtggaaccgcgatagg
acacaaattgccatcagtcctaataaccacgaagtccatatttacaagaagagtggtaac
cagtgggttaagacccatgagctgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagccgaccgtaatgcctatgtgtggtcc
cagaaggagggggtatggaagcccacactggtcatcctcaggatcaaccgagccgccacc
ttcgtcaagtggtctccactggagaacaagtttgcagttggtagtggtgcgcgactcatc
tctgtctgctactttgagtctgagaatgactggtgggtgagcaagcacatcaagaagcca
gtccgctccaccatcctcagtctggactggcatcccaacaacatcctgctggctgctgga
tcctgtgatttcaaatgcagggtgttctcagcctacattaaggaggtggaagagaaacca
ggccccacaccctggggcagcaagatgccatttggggctgtgctagcagaatttggagga
gcgggtggagggggttgggtccactctgtttctttctcagcctctggtaaccgcctggcc
tgggtcagccatgacagcactgtcactgtggtggacagctccaagactgccagtccttca
cagctgaagacggagttccttcctctcctcagtgtcatttttgtttcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgcgacgatagtggaacgctg
acatttgtgtctaagctcgacctccccaagcagagtatccagaggaacatctctgccatg
gagcgctttaggaacatggacaagagagccaccaccgaggaccgcaacactgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgagggagacaaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcaatgaccatttgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
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