Siniperca chuatsi (mandarin fish): 122874043
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Entry
122874043 CDS
T08948
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
schu04517
IgSF CAM signaling
schu04530
Tight junction
schu04810
Regulation of actin cytoskeleton
schu05100
Bacterial invasion of epithelial cells
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122874043 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122874043 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
122874043 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122874043 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122874043 (arpc1b)
05100 Bacterial invasion of epithelial cells
122874043 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122874043 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122874043 (arpc1b)
Membrane trafficking [BR:
schu04131
]
Others
Actin-binding proteins
Arp2/3 complex
122874043 (arpc1b)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122874043 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
RMC1_N
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Tricorn_2nd
SH3_3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
122874043
NCBI-ProteinID:
XP_044047473
LinkDB
All DBs
Position
LG3:8104419..8110755
Genome browser
AA seq
380 aa
AA seq
DB search
MAYYSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGAKWAKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTSWGSKMPFGEMLFESGGSGATSQASVGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTSTVNSLSSETLPLLCVTFVTENSLIAAGHDCYPVLFVYDSAKGSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQGTEKDLNTLHKNSISEISVLEGGRNQCTKFCTTGMDG
GMGIWDVKTLESAMKNLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactatagcttcctgctggaaccaattagctgccatgcctggaacaaagatcgg
acccagatcgccctgtgccccaacaaccacgaggtccacatctacaagaaagatggagcc
aagtgggccaagatccatgagctgaaggagcacaatgggcaggtgacaggtattgactgg
gctcctgacagtaatcgtatagttacttgcggagcagaccgtaatgcctacgtgtggacc
ctaaaagagggcacatggaagcccaccctggtcatcctcaggatcaaccgcgctgctcgc
tgtgtgaagtggtcgccacgagagaacaagtttgctgtaggcagcggctcacgtctcatc
tccatctgctactttgagcaggaaaacgactggtgggtgtgtaagcacatcaagaagccg
attcgctccaccatcctcagtctggactggcatcccaacaatgtcctgctggctgctgga
tcctgtgacttcaaatgcagggtgttttcagcctacattaaggaggtggaggagaagccc
ggccccacttcctggggcagcaagatgccattcggggagatgttgtttgagtccggagga
tctggagctacaagtcaggcttcagttggagggggtggttgggtgcacagcgtatgcttc
tcacactccggcaaccgcctggcctggacctcccatgactccactgtgtctgtcgcagag
ggaggcaagaccagcacggtgaacagtctgagctctgagacacttcctctgctgtgtgtc
accttcgttactgagaacagcttaatagcagctggccatgactgttacccggtgctgttt
gtgtacgacagtgccaaaggcagcttgacatttggtggcaagctggacgttcctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgggcctca
gagacccagggcaccgagaaggacctgaacaccctgcacaagaacagcatcagtgaaatc
tcagtgctggaaggaggacgaaaccagtgcaccaagttctgcaccaccggcatggatgga
ggaatgggcatctgggatgtcaagactctggaatctgcaatgaagaacctgaagatagtc
tga
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