Siniperca chuatsi (mandarin fish): 122874090 Help Entry 122874090         CDS       T08948                                  Symbol polq Name (RefSeq) DNA polymerase theta isoform X1   KO K02349   DNA polymerase theta [EC:2.7.7.7] Organism schu  Siniperca chuatsi (mandarin fish) Brite KEGG Orthology (KO) [BR:schu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:schu03400]     122874090 (polq) Enzymes [BR:schu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      122874090 (polq) DNA repair and recombination proteins [BR:schu03400]  Eukaryotic type   Other factors with a suspected DNA repair function    DNA polymerases     122874090 (polq) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc DUF4332 HHH_5 Motif Other DBs NCBI-GeneID:  122874090 NCBI-ProteinID:  XP_044047591 LinkDB All DBs Position LG3:16460356..16478211 Genome browser AA seq 2858 aa AA seqDB search MSTSGPSLKKKSYMGQHQIKKKKSFQAPDEPPDGDRLLQKTSYLSGKTNINRDTLMGGGA EFPLGESTLALDEEMLQVLDAVDPMKPAANNACQTTVNRDAQEEPASSAVFAPSRSLAPV ADNKRESGRAHQPTGPHRAPSTQERVCGRSGDCKKPGWRADCKDLAQRLLFSEDLEEVEH AHRGAENIQSLQDSVCINGQSSQEIKKRQQVGSSTNRQKPTSRSKSSPRSKDKSGPNMNA DPSLDVSRDYILFSPTRLAAAMKKAKLQQSLQNQSASVLTVPSGLDLSTLSDTLPRPGIA LCAPAGQAEKLLLSSWGLPKPVLERYQKHGVTHMFEWQAQCLTVGQVLQGGNLVYSAPTS AGKTLVSELLMLKRVLETKTKALFILPFVSVAKEKMHYLQSVFEEAGVRVEGYMGSTSAA GGFTALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIR YIAQKQNTTGSLSEGVQIIGMSATLPNLSLLASWLGAELYQTDYRPVPLQEHLKVGCNIY DKSLSVVRQFTPALHIKGDDDHIVSLCYETVREGRSVLLFCPSKNWCEKLADSIAREFYN LRHADCQGEAEPQPVCLDREGLVDIIAQLRRTPAGLDPILQRTVPWGVAFHHAGLTFDER DVLEGAFRQGMVRVLAATSTLSSGVNLPARRVIIRTPTFNGHLLDPLTYKQMAGRAGRKG VDTTGESVLVCKEAERQKGISLLKGALQPISSCLVRREGEGVTTSMLRAILEIIVGGVAS APQDVRLYASCSLLTASMKCDGKKESNEKTNKGAIEACVDWLMDNEFISIQKDGQEERYC PTQLGAATLSSSLSPPEAVGIFADLQRAMKGFVLENDLHILYLITPLYAEWTTIDWYQFF CLWEQLSSSMKRVAELVGVQEGFLARSVSGKLVAKTEKQRRQMAIHKRFFTTLVLQDLVN EVPLGTVASKYNCNRGQLQSLQQSASTYAGMVTVFCKRLGWHNMELLLSQYQTRLSFGVQ RELVDLVRVSLLNATRARTLYAQGLCTVAELARATVADVEKALRNAVPFKSSKRAVDESE VEAAERRRLRCVWVTGGRALTEQEAAVEIVSEARLLLQEDLAQLGVQWDPATLPPGAPAV NSPDDHQSRDSDTSSASYLSSHEAQMDNIKDHQEGDRVKKSESRDIDRHGEENKEEYKCE ERVSERKMQKKQQAEGEAKREQGKSKPEDMVINRKLEEHRKEARTEPDIRQTGNKVQLQR SKKTNKDETNKKLLMANDTEDPDEKREGQKRTRSEQGGDERKKAEPKEGETSKGIVLIRH EQANRPVPERSLTQELAEIVSSPLPQPMPRPQPSPSPMAPPRFRAPISRVEEQHSVPTRT SKGDGTTGLAASPVQPGTLRHARALSKVLHSIQTDKSLQDNVETAQTTHSKPTVVSSVQN SAPGGQLPTTVQAPGPVQGVSTPTNADMLDSPLSVSPASVPLFSPEAKRRRTDGGEVDKF SSPELYAGGERDEDVEGAVKKGEDSFGDSFELDTQTERIIFQQTCQHRDGNDRGMNQSVE TKKIRGEEMVEAAVELDKDTKEGSNRLEAPENACPRFNISLTDSQMELILNTSHQISPGP GGDNGVEYKDEGGDEDEALGADQATSESVNRSSSFLFDSLYDSSLLAGLSPHQILDQSDE EESVGQEIRDKCPLPSTQERRRSKLLTNQEAEKQEAIQWGESSLNLSEWGDSLLVGEHFL ERQSLFKHTERTQKEQEASHQQPNADHVLPEEQLPKPKPSQIQPQPTTTTTTTTENEYNK TKTSDNKGHTHKSKQYNNAQNDNKPCGRLETMNGEGENEKQVEKKIMEEEEKEEHMYALF SDNAVVKHPNVQNAPENTLYCSPGLQDIFDRWPSMSEQPWQNTTTGHTATHTLINAANTA EVPDLPQPSIHVDRKRGKPNVQVVAAESVSQEKQPSRHDSEDVAERPGSAGDLIPPTQET PPVTPRVKLTTSCVQSPLTAQPLNQSTPSTFLPRRPAITKCHLSEAVADTKQPNSTSDRS HEHQLRQKPKTLPVPSSKTKPLLHANQNLSPLRDCASPSSPRPKLPSDVESPVTDEGFTL QLSEDTSLCSSNSGTFSIIDVASDRRLFDTFINEWKTKERYSLALACEKREPRQQPEGEI GGKHKKASAAHQKPHRVDGFPVRDSDGLVLIGLSVCWGARDAYYMSLQQEQSKGLSSSLA PPPLDDDLPVSERLGQVKTCLSRPLAGHRGGVVVTYDIIQVYKMLVLSCGFSLEGNCEDP KVACWLVDPGSEERTLPNMVTVYCPEELPLLDGLGNAHAHCPRVRAATKSVLVHTVMNHL TGLLEKDGMLDLFRSIEMPSQVCLALLELNGVGFSVEECERQKHVMQAKLTALESQAYNL AGHSFSLTSIDDIAQVLFLELHLPPNGDVGGLKSKKTLGYGRRGGGRVRLGKQFSTTKDV LEKLRLLHPLPGVILEWRRITNALTKVVFPLQREKQYHPTLTMNRIYPIAQTHTATGRVS FTEPNIQNVPKDFEIHMPTVVGESPPSQDSCHMTSKPGKKRRSVVPSFAAGSAEQGPAFS VSMRHAFVPFSAVFLYCTVGGMILAVDYSQLELRVLAHLSKDQRLLQVLNGGADVFRCIA AEWKSVDPESVNNNLRQQAKQICYGIIYGMGAKSLGEQMGVEENDAACYIESFKARYKGI NAFLRETVKNCIKNGYVQTLMGRRRYLPGITNSNAHIKAHAERQAVNTTVQGSAADIVKL ATVNTQKRLRKTYPAAPLSHQHTHSASNHCRAGMSQLRGAYFVLQMHDELIYETTEEDVI QVAQIVKREMESAVKLYVKLKAKVKVGPSWGNLQDLDI NT seq 8577 nt NT seq  +upstreamnt  +downstreamnt atgagcacctcgggtccttctctgaaaaagaaaagctacatggggcagcaccagatcaag aagaaaaaaagcttccaagctcctgatgagccaccagacggagacagactgttacagaaa accagttatctgtcaggcaaaacaaacatcaacagagacaccctcatgggtggaggagcg gagtttccactgggagaatccacattagctctcgatgaagagatgctgcaggtgttggat gctgtagatcccatgaagcctgcagctaacaatgcttgtcaaacaacagtaaacagagat gcacaggaagagccagcatcgtcagctgtctttgccccttcacggtctcttgcaccagtt gcagacaataagagggagagtggcagagcacatcagcccacaggaccacacagagccccc agcacccaggagagagtctgtgggcgtagtggtgattgtaagaaaccaggatggagagct gactgcaaagaccttgctcagaggcttctcttcagtgaggacttggaggaagtggagcat gctcacaggggtgcagagaacatccagtcactgcaagactctgtctgcatcaatgggcaa tctagtcaagaaataaaaaaacgtcagcaagtaggcagctccaccaataggcagaaacct acatccagaagtaagagctctcctcgtagcaaggacaaaagtgggccaaatatgaatgct gatccatctctggatgtatccagggactacatcttgttcagccccacccgcctcgcagcg gccatgaagaaggccaaactccagcagtcactacagaatcagtccgcttctgtgctcaca gtccccagtggcttagacctcagtactctgagtgacactttacctcggccaggcatcgcc ttgtgtgctcccgcggggcaagctgaaaagctgctgttatctagttggggcttaccaaaa cctgtcctggagcgctaccagaaacacggagtgactcacatgttcgaatggcaggctcag tgcctcactgttggacaggtgctgcagggaggtaacctggtatactctgcccccactagt gctggaaaaactctggtgtcagagctgctgatgttgaagcgtgtattggagactaaaaca aaagctctcttcattctgccatttgtctctgtggccaaagagaagatgcactaccttcag agtgtattcgaagaggcaggagttcgtgtggagggatatatgggcagcacctcggctgct ggagggttcacagcactagatgtggctgtttgcaccatagaaaaagccaattccctcatt aacagactaattgaagaggacagtatgggtctactaggtatggtggtggtggatgagtta catatggttggagattctggaagaggatacctactagaactgctcttaaccaaaatccgc tacattgcacagaagcaaaacaccactgggtctctttctgagggtgtacagatcataggt atgagcgccaccttgcctaacctctccctcctggctagctggttaggtgcagagctttac cagacagactacaggcctgtacccctgcaggagcatctcaaggtgggctgcaacatctac gacaagagcctctctgtggtgcggcagttcactcctgcactccacattaagggtgatgat gaccacatagtgagcttgtgctatgagactgtgagagagggccgctctgtgctgctgttc tgcccctcgaagaactggtgtgagaaactggcagacagcatcgccagagaattctacaac ctcagacacgctgattgtcagggcgaagcagagcctcagccggtgtgtctggatcgagag ggactagtggacattatagcccagttgagacgaactccagctggtttagaccccatcctc cagcgaactgtgccatggggggtggccttccaccacgctggtttgacgtttgatgagcgt gatgtgttggagggagcttttcgccagggcatggtcagagtcctggctgccacctctaca ctctcttcaggggttaatctcccagctcgcagggtcatcattcgaacccccaccttcaat ggacacttgttggacccactcacatacaaacagatggctggacgagcagggaggaaaggg gtagacactacaggtgagagtgtgctggtgtgtaaggaggcagagcgtcagaaaggtata agtctcctcaagggtgctcttcagccaatcagcagctgcctggtaagaagggagggagaa ggtgtcaccaccagcatgctgcgagccatcctagagatcattgttggaggtgtagccagc gctccacaggatgtgaggctatacgcttcatgctcactactgactgccagcatgaaatgt gatggcaaaaaagaatcaaatgaaaagaccaacaaaggagctattgaggcctgtgttgac tggctgatggacaatgaatttatcagtattcagaaggacggacaagaggagcggtactgt ccgactcaacttggtgctgccaccctttcctcctccctgtcccctcctgaggctgtggga atatttgcagatctccagcgggccatgaagggctttgtactggaaaatgacttgcacatt ctgtatctgatcaccccgttgtacgcagagtggactaccatagattggtatcagttcttc tgtctgtgggagcagctctcatcatcgatgaagagagtagcagagctggtgggcgtccag gagggttttctcgcacgatctgtcagtggcaaacttgtcgcaaagacagagaagcagcgt agacagatggctattcataaacggtttttcaccacccttgtgctacaggatctggtgaat gaggtgcctttgggaacagtggcatccaaatacaattgcaatcgtgggcagttacagtct ctccagcagtctgcttctacatatgcaggtatggtaacagtgttctgcaagcgcctaggc tggcacaacatggaactgctgttgtcccagtaccagaccaggctgagctttggagtccag agggagctggtcgaccttgtcagggtttccctcctgaatgcaacacgagccagaacactc tacgcacaaggcctctgtactgttgctgaactagccagggctactgtggctgatgtggag aaagccttgaggaatgctgtcccatttaagagctctaagcgtgcagtggatgagagtgag gtggaggcagctgagagacggcgcctccgctgcgtctgggtcaccggtggtcgggccttg acggaacaggaagccgctgttgagatagtgtctgaggcaagactcctccttcaggaagac ctggcccagttaggagttcagtgggacccggcaacactgcctcctggggctcctgctgta aacagccccgatgaccatcagagcagggactcggacacctcatctgcctcatatctcagt tcacatgaagcacagatggacaacattaaagatcaccaagaaggagacagggtcaagaaa agtgagagcagagatattgacagacatggggaggagaataaggaagaatataaatgcgag gaaagggtttctgaaaggaaaatgcaaaagaagcagcaagcagaaggagaagccaaaaga gagcaggggaagtccaagcctgaagacatggtaataaacagaaaattggaggagcataga aaggaagccaggacagagccagatatcagacaaacaggcaataaagtacaactgcaaaga agcaaaaaaacaaacaaagatgagacaaataaaaaattattaatggcaaatgacacagaa gatccagatgaaaaaagagaaggacaaaagcgcacaaggtcagagcaaggaggggacgag cgcaaaaaagccgagccaaaagaaggggagacaagtaaagggattgtcttaatcagacat gagcaagcaaatcgtcctgttcctgaaaggagcctgactcaggaattggctgagattgta tccagccccctgcctcaaccaatgccacgtcctcagccctccccttccccaatggctcct cctcggtttagagctccaatatcccgagtagaagaacaacacagtgttcctacaaggaca tcaaaaggagatggtaccacagggcttgctgcctcacctgtgcagccaggtacactgagg cacgcaagagccttaagcaaagtcctccactctatacagactgacaaaagcctacaagat aatgtagagactgcacaaacaacacactcaaaacccacagtagtttcttcagtccaaaat tcagcacctggaggccagttacctacaaccgttcaagctcctggccctgtgcaaggtgtt tctacacctacaaatgcagatatgctagactctcccctgtctgtctctcctgcctctgtt cccttattctctcctgaggccaagcgaagaaggacagacggcggggaggtagataagttt tcatctcccgagctgtacgcaggaggtgagagagatgaagatgttgagggagctgttaaa aaaggagaagatagttttggtgacagctttgaattggacactcagacagaaagaatcatt tttcaacagacgtgccaacacagagatgggaatgatcgaggtatgaatcagtcagtagaa acaaaaaagataagaggggaggaaatggtagaagcggctgtagagctggataaggacaca aaagagggaagtaacagacttgaagcccctgaaaatgcatgtcccagattcaatatttct ctcacagatagccagatggagctcattcttaacaccagccaccagatttctcctggtcca ggtggtgataatggagttgaatataaagatgaaggtggtgatgaggatgaggccctcggt gcagatcaggctacctctgagagtgtcaacagaagcagtagcttcctgttcgacagcctg tatgacagctctctgctggctggtttgagcccacaccagatccttgaccaatcagacgaa gaggaatctgttggccaggaaatcagagacaagtgccctcttccgtcaacccaggagcga agacgcagcaagcttctcaccaatcaggaggcggaaaagcaggaggcaatccaatggggt gagtcctccttaaacctgtcagagtggggcgactcattgttggtgggcgaacactttctg gagaggcagagcttgttcaaacacacagagagaactcaaaaagagcaagaagccagtcat cagcaacccaacgcagaccatgttctgcctgaggaacagctgccaaaacctaaacccagt caaatacaaccacaacccaccacgacaactactaccacaactgaaaatgagtacaacaag actaaaaccagtgataataaaggccatacacacaaaagtaaacagtataataatgcacaa aatgacaataaaccatgcgggagactggaaacgatgaatggagagggtgaaaatgagaag caagttgagaagaaaataatggaagaggaggaaaaggaagagcacatgtatgctttattt tcagataatgcagttgttaaacacccaaatgtccaaaatgcacctgaaaacactctttat tgcagccctggtttacaagacatctttgaccgctggcctagtatgtctgagcagccctgg caaaacacaacaacaggccacacagccactcatacacttattaatgctgcaaatacagca gaagttccagatctacctcagccctcaatacatgtggacaggaaaaggggaaagccaaat gtgcaggttgttgcagctgagagcgtttcccaagagaaacaaccctcaagacatgacagt gaggatgtagcagagagaccaggctctgctggtgatctcattcccccaactcaggaaacg ccacctgtcacacccagagtaaaactgaccacctcatgtgtccagtcgcctctcaccgct cagccactcaaccagtcgactccctcaaccttcctgccacggagaccagcaatcacaaaa tgtcacctctcagaagctgttgctgacactaagcagccgaattccacatctgatcgcagc cacgaacaccagctgagacagaaaccaaagactctacctgttccaagttcaaaaacaaaa cccctgctacatgccaaccagaatctcagccctctgcgagactgcgcttctccatcctcc ccccggccgaagcttccctctgacgtagaatcacctgtgactgatgaaggcttcactctt cagctgtccgaggatacatcgctctgttccagcaactctgggaccttctccatcatagac gtggcaagtgacaggcgcctcttcgacactttcattaatgagtggaaaacaaaggagcgg tactctctggccttggcctgtgaaaagagggagcccagacagcagcctgagggggaaata ggagggaaacataagaaagcatcagcagctcatcagaagccccacagggtcgacggtttt ccagtaagagacagtgatggactggtgttgattggactgtctgtctgctggggagcaaga gatgcgtactacatgtctctgcagcaagagcagagcaaaggtctgagctccagtctggcc cctcctccactggatgatgatttgccagtaagtgagaggctggggcaggtgaagacctgt ctgagcaggccattggctggtcatagaggaggtgtggttgttacatatgacatcatacag gtgtacaagatgctggtcctgagttgtggcttcagcttggagggaaattgtgaagatccc aaggttgcgtgctggctagtggaccccggcagtgaggagaggactctacccaacatggtg actgtctactgtcctgaggaattacctctgctggacggacttgggaatgcgcatgcacac tgtcctcgtgttagggcagctaccaagagtgtgctcgtacacactgtcatgaaccatctc actggcctgctagagaaagacggcatgcttgacttattcaggagtattgagatgccctcc caggtgtgtttggctctgttggaattgaatggagtgggcttcagtgtcgaagagtgtgaa agacaaaaacatgtgatgcaagccaaactcacagcgctggaatctcaggcttacaacctg gctggacacagcttctccctcaccagcatcgacgacatagcacaggtgttgtttttagag ctccatctgcctccaaacggtgatgtgggaggattgaaaagtaagaagactcttggctac ggcaggagaggcggtggcagagtacgacttggaaagcagttcagcaccaccaaggatgtt ctggagaagcttcgcctcctgcacccgttgccaggtgtgattctggagtggaggcgcatc actaacgcactgactaaagtggtgttccccctgcagagggagaagcaataccaccctact ctgaccatgaacagaatataccccatcgcccagacacacacagccacaggtagagtgagc ttcactgagcccaacatacagaatgtccccaaagactttgagattcacatgcccacggtg gtgggtgagagcccaccttcacaagacagctgccacatgacctccaaaccaggaaagaag agacgttctgtggtgccttcatttgcagctggcagtgcagaacaaggcccagccttctct gtcagcatgagacatgccttcgtacctttttcagctgtctttctgtactgcactgtaggt gggatgatattggctgttgattattctcagctggagttgagagtgttggctcacctctcc aaagatcaacgccttctgcaggtgctgaatggaggagcagacgtgtttcgctgcatcgct gctgagtggaaaagtgtcgacccagagtccgtgaacaacaatctcaggcaacaggcaaaa cagatttgctatggcattatctatgggatgggagccaagtctttgggggagcaaatggga gtggaggagaatgatgcggcctgctacatagagagtttcaaggccagatacaaagggatc aatgcttttcttagagaaactgtgaagaactgtattaagaacggctacgttcagactcta atgggccgtaggagatacctacctgggatcactaacagcaatgcgcacatcaaagcacat gcagagcgtcaggcagtgaacacaactgtacagggttcagcagcagacattgttaaactc gccactgtgaatacccagaaacgactacgaaaaacataccctgcagctccactctctcac cagcacacacactcagccagcaatcactgcagagctgggatgtctcaactcagaggagcc tactttgtcctgcagatgcatgatgagctcatctatgaaaccacagaggaagacgtcata caggttgctcagatagtcaagagggagatggagtcagcggtaaaactgtatgtaaagctt aaggccaaagtcaaggtgggacccagctggggcaacttgcaggatctagatatataa

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