Siniperca chuatsi (mandarin fish): 122874250
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Entry
122874250 CDS
T08948
Symbol
snupn
Name
(RefSeq) snurportin-1
KO
K13151
snurportin-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122874250 (snupn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122874250 (snupn)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
122874250 (snupn)
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GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
mRNA_cap_enzyme
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
122874250
NCBI-ProteinID:
XP_044047783
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Position
LG4:complement(4619887..4628954)
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AA seq
373 aa
AA seq
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MDDLTKALSTSFAVSKEPNNTAAPHPRLAQYKSKYSVLEQSERRRRFLDLQKSKRLNYVN
HARRLADGDWTGADSDGEEDMEKPEEGERDQDGNTEEEGMEIERRKLPKHYANQLMLSEW
LVDVPSELDTDWLMVVCPMGKRSLIVASKGSTAAYTKSGYCVNRFPSLLPGGNRHNSAMG
KDYTILDCVYSEVDRTYYILDVMCWRGHPVYDCPTEFRFYWLQSKVQETDGLSEIAKRNP
FRFVSLQSTDCTAELIQKALAAEYSFSVDGLLFYHRQTHYTPGSTPLVGWLRPYMVTDIL
GIEVPVGPLTTKPEYASHQLQQILEHKKTSSEVRPANRSGGYELEYLSTPSQDSGDTLNF
LNQKPIREAHMEL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgaccaaagccctctcgaccagctttgctgtgtccaaggaacccaacaat
acggccgccccccaccctcggctggcccagtacaagagcaagtacagcgtgctggagcag
agcgagcgacgccggcgcttccttgacctgcagaaaagtaaaaggttaaactacgtcaac
catgcgcggcgtctggctgatggggactggacaggggcagacagcgatggagaggaggac
atggagaaaccagaggagggggaacgggaccaagatggcaacacagaggaagaggggatg
gagattgagaggaggaagctgccaaaacattatgcaaaccagctcatgctgtcagagtgg
ctggtggacgtgccatcagaattggacactgattggctgatggtggtctgtccaatgggg
aaaaggtctctcattgttgcctccaagggttccactgcagcgtacactaaaagcggctac
tgtgtgaaccgtttcccctccctgctgcccggtgggaaccgtcacaattcagccatggga
aaagactacacgattctggactgcgtttacagtgaggtggacagaacatactacatcctg
gatgtcatgtgctggagaggccacccggtgtacgattgcccaaccgagttccgtttctac
tggctccagtccaaagtccaagagacggacggcctatcagaaatcgccaaacgtaaccct
ttccggtttgtgagcctccaaagcactgactgcacagcagagttgattcagaaagcgctg
gcagctgagtacagcttcagcgtggatggtctcctcttctaccaccggcagacccactac
acccctggcagcacccctctggtgggctggcttcgcccctacatggtcaccgacatcctg
ggcatagaggttcctgtaggacccctcacaaccaagcctgagtatgccagccaccagctg
cagcaaatcctggaacacaaaaaaacatcaagtgaagtccgcccagccaacagaagcgga
ggctatgagttagagtacctgtccaccccgagccaggacagcggggacactctgaacttt
ttgaatcaaaagccaataagggaagcacacatggagctctga
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