Siniperca chuatsi (mandarin fish): 122874333
Help
Entry
122874333 CDS
T08948
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122874333
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122874333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
122874333
NCBI-ProteinID:
XP_044047957
LinkDB
All DBs
Position
LG4:complement(11483570..11503079)
Genome browser
AA seq
1705 aa
AA seq
DB search
MDPKGQSSTFKRSSLKRSTSGSQKAQKAWIERNFLKRECIHIFPTKDPTRCACGQLTTQH
VAIPPGANSVEETNQLVQIDTPKDKWSVIKHTRTYPTDSFGLIEFQGGGFINKAMYIRVS
YDTKPDNLLHLMVKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAVTTGAWIF
TGGVNTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGILENKVDLIGKDVNRPYQTMANPL
SKLAVLNNSHSHFILTDNGTCGKYGSEVKLRRLLEKHISLQKINTRLGQGVPLVCLIVEG
GPNVISIALESLRDEPPIPVVVCDGSGRASDIISFAHKFSEDGGLVNDDVREQLLVTIQK
TFNYSKSQSQQILLMVMECMKKRELITVFRMGSEGQQDIEMAILTALLKGTNASAADQLS
LALAWNRVDIARNHIFVYGHNLPPAGAMANTATSVAPAQEKQKSPASAPRNKTRGKKGKG
KGKAKPEPPEETDPRKLELIRWVNSLEQAMMDALVLDRVDFVKLLLENGVNIHHFLTIPR
LEELYNTKLGPANTLNAMVRDVKKGNLPPDYQITLIDIGLVLECFMGGAYRSNYTRKAFR
NLYNNLYGLKRPKALKLLGMEDDEPRTKGKKKAKKKKEEEVEIDVDDPEVCRFKFPFHEL
MLWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHECSESELVDDISQDLENNSRE
FGQLAYELLDQSYKHDEQVAMKLLTYELVNWSNSTCLKLAVAAKQRDFIAHTCSQMLLTD
MWMGCLRIGKNPGLKVILGIIFPPLILLLDFRLGDDASYHAPGGKEEGKDREDDTKSSKD
PNADATSRKGDEEEGNTNVRKIPIGKRFFEFYDAPFTKFWFNTICYLGYLMLYNYIILVK
MERWPSLQEWTVIAYILTLGSEKVRQILMSEPGKLKQKISVWLEEYWNITDLAAISTFLL
GLMLRLQHEPYMGYGRVIYCIDIIFWYIRILDIFGVNKYLGPYVMMIGKMMIDMMYFVVI
MLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDRKTRIYIYAMEI
NPPCGEHLYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSIS
NQVWKFQRYQLIMTFHDRPILPPPLIIFSHLYILFNRLFRRCARKKQEGELDEKDRGLKL
RLNPEELKSLYEFEEQCVEEYFREKEDEQQSSSDERIKVTSERVENMSMRLEEVNERENT
MKASLQTVDLRLAQLEEIHGRMAVALEKLAGVDRLELTRTFSRNSSVCDPSSLLRQGSIN
SADGYSLYRFHMDMEEFAAKQKDTDETTKTGVERQRSLRQASSICNLNTKEGGQTLEISG
LERSRPPSSRVDILISPCEQKPPSSASSQETITNIKQGSTMLLDRLTDKDRLKPSSPPKR
TKSLRYYPVEDQPTSPLTKRRAMSTIIVSPPDESEEAAEPTQKDQLPQRTSSSPKRTRSL
RYLPTESQSQTSLVTRERAMSSIIYNPVEAGDDVVQTTDYKSVVEQVTKTANQWPANLEY
QVHPSSIGHMPKVSTVRTLAQQFQSGTVAAEHKKEEEDQTDHIPLESKGALPATEPVEDQ
TKMKAKRNLSDTTEYLTVADETYMPSHRSQSWNESERKAKCSMVSKEPRASSSERDLVEA
CRVAGEDMGKKMDAEKREDAAQEKK
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaagggccagagtagtacctttaagcggtcctccctgaaacgctccacatct
ggctcgcagaaggcacaaaaagcttggattgaaaggaactttcttaaaagagaatgtatt
cacatatttcccaccaaggacccgaccagatgtgcctgtggtcagctgacaacgcagcat
gtggccatccctcctggtgccaactcagtagaggaaacaaaccaactggtgcagattgac
actccaaaggataaatggagtgtgatcaagcacaccaggacctacccaacagactccttt
ggcctaatcgagttccagggcggaggattcatcaacaaggccatgtatattcgagtcagc
tatgacaccaagcctgacaacctcctgcatttgatggtaaaggactggcagttggagctg
cccaccttgctcatctccgtacatggaggtctccagaactttgacctccagcccaaactc
aagcaagtgtttggtaaaggcctgatcaaagcagccgtcaccaccggagcttggatcttc
accggtggagtcaacacaggggtgatccgtcatgtcggggatgccttaaaggaccattcc
tccaagtcacgggggaaagtgtgcgcaataggaatagctccatgggggatcctggaaaac
aaagtggatctcatcggaaaagatgtaaacagaccctatcagacaatggcgaacccactg
agcaagctggctgtgctcaacaacagccactctcacttcatcctgaccgacaacggcacc
tgtgggaagtacggctctgaggtcaaactccgtcggctgctggagaagcacatctccctg
cagaagattaacacgcgtttgggtcagggggttcctctagtgtgtctgatagtggaggga
ggtcctaatgtgatctccattgcactggagagtctgagagacgagcctcccatccccgtg
gtggtgtgtgacggaagcggccgagcttctgacatcatttccttcgcgcacaagttctca
gaggacggaggcctggttaatgatgatgtcagagagcaacttttggtgaccattcagaag
actttcaactatagcaaaagccaatcacagcagatcctgctcatggttatggagtgtatg
aagaaaagggaactgatcacagtttttcgaatgggttctgagggacaacaagatattgaa
atggccattcttactgccttgttaaaaggcacgaacgcttcagcagctgaccagctcagc
ttggctctggcctggaacagagtggatattgctcgcaatcacatctttgtttacggacac
aatttaccacctgccggtgccatggccaacactgcaacctctgtagccccggcccaggag
aagcaaaagagtcctgccagcgctcctcgcaacaaaacccggggaaagaaggggaagggg
aaggggaaggcaaagcctgaaccaccggaggaaacagacccaaggaagttggagttgatt
cgttgggtgaactctctggagcaggctatgatggatgctcttgtgctggacagagtggac
tttgtcaaacttctccttgagaatggggttaatattcaccacttcctcaccattcccaga
ctggaggagttatacaacacgaaacttggccctgctaatacacttaatgccatggttaga
gacgtcaaaaagggaaaccttcctccagattatcagatcactttgattgatattggtctg
gtgctggagtgcttcatgggtggagcttacaggagcaattacaccaggaaggctttccgc
aacctctacaataatttgtatggactaaaaaggccaaaggctctgaagcttctaggaatg
gaggatgacgaacctaggacaaaaggcaagaaaaaggccaaaaagaagaaagaggaagag
gtggaaattgatgtggatgaccctgaggtctgtcgatttaagttccccttccacgagctg
atgctgtgggcagtgctgatgaagcgccagaagatggcgctgttcctgtggcagcgtgga
gaagaggctatggcgaaagccctggtggcctgtaaactgtataaagccatggcccatgag
tgctctgagagtgaactggtggatgacatctcccaagacctggagaacaactccagagaa
tttggccagctggcttatgagctattggaccagtcctacaagcatgatgaacaggtggcc
atgaaactcttaacatatgagctggttaactggagtaactccacctgtctgaagctggct
gtggctgctaaacaacgtgacttcattgcccacacctgcagccagatgttgctcactgat
atgtggatgggctgcttaaggatcggcaaaaatccaggcctcaaggttattcttggaatc
atctttcctcccctgattcttcttttggatttccgtcttggagatgatgcatcctatcat
gcacctggaggcaaagaagagggaaaagacagggaggacgacacaaaatccagcaaggac
cctaatgctgatgcaacttcccgaaagggggatgaagaagagggcaacaccaatgtccgc
aaaatccccattggaaaaaggttctttgagttttatgatgcaccattcaccaaattctgg
ttcaacacaatttgctatctgggctatttaatgttgtacaactacataatcctggtgaaa
atggagcgatggccatctctacaagagtggacggtcattgcatacatcctcacacttggc
tctgaaaaagtcagacagattctgatgtcagagccggggaagctgaaacagaagataagt
gtgtggctggaggagtactggaacatcacagacctagctgccatttccaccttccttctt
gggttaatgctacggctgcagcatgaaccttatatgggctacggcagagtcatctactgt
attgacatcatattctggtacattcgcatattggacatctttggagtcaacaaatacctg
ggaccctatgtgatgatgatagggaagatgatgatagatatgatgtactttgtggtgatc
atgctggtggtgcttatgagctttggggtggctcggcaagccatccttcaccctgatgag
gagccaacatggcgcctggccagaaacattttctacatgccctactggatgatctatgga
gaggtttttgcggactcgatagaccgtaagactagaatttatatctatgcaatggaaatc
aaccctccatgtggtgaacatttatatgacgaggatgggaagaaactgcctccatgtatc
cccggtgcctggctcacacctgctatcatggcctgttacctactggtggcaaacattctt
ctggtcaacttgctcattgcagtgttcaacaacactttcttcgaggtcaagtccatttcc
aaccaggtgtggaagttccagagatatcagttgatcatgacgttccatgaccgtcccatc
ctgccgccccctctcatcatcttcagccacctctacatcctcttcaacaggctgtttcgg
cggtgtgccaggaagaaacaagaaggagagctggatgagaaggaccgcggactcaagctt
aggctgaatccagaggagctgaaaagtctgtatgagtttgaagaacagtgtgtggaggaa
tatttccgtgagaaggaggacgagcagcagtcctccagtgatgaacgcatcaaggttacc
tcagaaagagttgagaatatgtccatgcgtctagaggaggtaaatgagagggagaacact
atgaaggcctccttgcagacggtggatctgcgcctggcccaactggaggagatccatgga
cgaatggcagtcgccctggaaaagcttgcaggggtggacagattggagctgaccagaacc
ttttcacgaaactcctctgtgtgtgacccctcctccctacttcgccagggtagtattaac
agtgctgatggttacagtctttaccgcttccatatggacatggaggagtttgcagcaaag
cagaaggacacggatgagacaactaaaactggtgtagaaagacagaggagtctgcggcaa
gcctccagtatttgtaatctcaacacaaaggaaggaggtcagaccttagagattagtggt
ttggagagatcgcgaccaccaagttcacgtgtggacattctcatatctccatgtgaacaa
aagcctccttcttcagcatcaagtcaagagaccataactaacataaaacaaggcagcaca
atgctgctagatagactaacagataaggatagactaaagccttcttcccctccaaaaagg
accaaatccttgagatactatccagtcgaagaccaacccacctctcctttgacaaagagg
agggctatgagcaccatcattgtcagcccgcctgatgaatcagaggaagcagctgaaccc
acacagaaggaccaactgccacaaagaacctcctcttccccaaagaggactagatcattg
cgatatctccctactgaaagccaaagccagacatcccttgtcacaagggagagagctatg
agcagcatcatctataacccagtcgaggcaggtgatgatgtggtgcaaaccacagattac
aaatcagtggtggagcaggtcactaaaacagcaaatcagtggccagcaaacttggagtac
caggtgcatcccagctccattggtcacatgcctaaagtgtcaacagtcagaacacttgcc
cagcagtttcaaagtggcactgtagctgcagagcataaaaaggaggaggaagatcagact
gatcatattcctttagaaagtaagggagctcttccggcaacagagcccgtggaagaccaa
acaaagatgaaggccaagaggaacctctcagacactactgagtatttgactgtagccgat
gaaacgtatatgccgtctcacaggtcacagagttggaatgaaagtgagaggaaagcaaag
tgctcgatggttagcaaggagccgagagcctctagcagtgagagagaccttgttgaagcc
tgcagggtggcaggggaggacatgggaaagaagatggatgctgagaagagagaagatgct
gcacaggaaaagaaataa
DBGET
integrated database retrieval system
