Siniperca chuatsi (mandarin fish): 122874365
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Entry
122874365 CDS
T08948
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1 isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122874365 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122874365 (rasgrf1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
BIG2_C
MYO6_lever
IQ
COG3_N
DUF641
Motif
Other DBs
NCBI-GeneID:
122874365
NCBI-ProteinID:
XP_044048032
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All DBs
Position
LG4:complement(12337458..12366374)
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AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGFLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENESSS
RPSGLYLLEGCICDRAPSPKPSLSAKECLEKQYYFTVSFTHENQKALELRTEDVKDCDEW
VAAISHASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LLKDNEKIHASPAAAPTDDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHIERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLMEDPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNSKLLYGEPPSSPRAS
RKFSSPPPLAITKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSTMSPFSK
TTLDINKLYVSSPIASKIPDEGEDKKDKVEDTLVSKQDLSVREESDNDQNQSDDGDPEAS
PTKSPTTPKNVKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSPDFESNNELKT
KVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDHGDNQITLEDVTPLVEGGKADPFENH
SALEIAEQLTLLDHLVFKVIPYAEFFGQGWMKNDKNEKTPYIMRTTKHFNDISNLIATEI
LRCEDVVTRVAVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTKA
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDLQPKVAQYLLDNSFVLDEESLYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacctggggtttttggcaaaa
aaggatggtacaagacgagggtgcttgagcaaaaagagctcagacaacacgaaatggcac
tcaaagtggtttgctttgttacagaatatgctcttttattttgagaacgagtccagctct
cgaccctcgggattatacctgttggagggatgcatatgcgacagggcgccttcacctaaa
ccttcactgtcagccaaggagtgtttggagaagcagtactatttcactgtcagcttcacc
catgaaaaccagaaggcactcgagttacgcacagaagatgtaaaggactgcgatgaatgg
gtggcagcaatatcacacgccagttacagaaacttggccaccgagcatgagactctcatg
cagaagtatcttcatctgcttcagattgtggagactgagaaaacagttgctaagcaactt
cgacaacagatagaagatggggaaatagaaattgaaaggcttaagtcagagatctctggg
ctgctcaaagacaatgagaagattcacgccagccctgctgcagccccaaccgatgacgac
tcagaaatcaagaaaatcaaaaaagtccagagcttcctgcgaggctggatctgcaggagg
aagtggaagacaatcatccaggattacatccgctcaccacatgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgttggactcggaggccgagtacgtccaacagcttcac
atcctggtgaacaacttcctgaggccgctccgcatggcagccagctccaagaaaccaccc
atcacccacgatgatgttagcagcatattcctcaacagtgaaactatcatgtttctacat
cagatattttaccagggtctaaaagccagaatagcgagctggccgacattagtgctggcc
gacctgttcgacatcctgctgcccatgctaaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggctcactgcaagcagaaccgagattttgacaagctgcta
aagcagtacgaggccaagcccgactgtgaggagaggactctggagactttcctcacctac
cccatgttccagattccccgctacattcttacgcttcacgaacttctggcccacacaccc
catgaacatatagagagaaacagtctggactacgcaaaatctaagctggaggagctttcc
agaatcatgcacgacgaagtgagtgagactgaaaacatcaggaagaacctggcaatagag
cgcatgatcgtggagggctgcgagattctcctcgacaccagccagacatttgtaagacaa
gggtctctcatccaggtgccgatgagtgagaagggcaagatcacccgtgggcgactgggc
tctctgtctctgaagaaagagggggagaggcagtgctttctcttctccaagcatttaatc
atctgcaccaggggttctgggggaaagcttcatctcaccaagaatggagtagtctcgctt
atagactgcactcttatggaggaccctgagggaacagatgatgagtccaaatcagacaag
agcggccaggacatggagcacctggacttcaaaattgtcgtggagccaaaggacagtcag
tcattcacagtcatcctggtggcctcctcgaggcaggagaagtctgcatggaccagtgac
atcagccagtgcatagacaacatccgctgcaatgggctgatgatgaacgcctttgaagac
aactccaaagtcacagtgccacagatgattaagtcagattcaagtctgtactgcgatgat
gtggacatccgcttcagtaagatgatgaactcctgcaaggtgctgcagatccgctacgcc
agtgtcgagcgcctgctggagagactgaccgacctccgtttcctctccatcgacttcctc
aacaccttcctgcactcctatcgcgtgttcaccaccgctgatgtggttctagacaagctc
atcaccatctacaaaaagcccatcagtgccatacctgctcggtccctggagttattcttt
gccagcagtcagaacagtaaactcctgtatggagagcctcccagctccccgagggccagc
agaaagttctcctcccctcctcctctcgctatcaccaagaattcatccccaaaccgccgg
cgcaagctctccctcaacatccccatcatcactgggggcaaagctcttgacctggctgcc
ctcagctgctcctcaaatggctatgcaagcatgtactcaaccatgtccccattcagcaag
accaccttggacatcaacaaactgtacgtatccagccctatcgcgagcaaaatccctgat
gagggagaggacaagaaggacaaggtggaagacaccttggtgtccaaacaagatctctct
gtacgagaagaaagtgacaatgatcaaaaccagagtgatgacggggacccagaagcctct
cccaccaagtcaccaaccaccccaaaaaacgtcaaatgcaaaaactcctcagagttctcc
ctgttttcatacaacaatggcatggtgatgtcctcgtgtcgagagctagataacaaccgc
agtgccctgtctgctgcctccgcctttgctattgctactgctggagccaatgagggaaca
cctaccaaggaaaaatatcgaaggatgtcccttgccagtactggcttcccaacagatcag
agaaatggagacaaagagtttgtgatcagacgagcagcgaccaacagagtcctgaatgtc
ctgaggcactgggtgtccaaacactctccggactttgagagtaacaatgagctgaagaca
aaagttatcgccttcctggaggaagtgatgcatgaccctgagctgttgacccaggagagg
aaagcagcagcaaacatcatcaggactctaactcaggaagatcatggtgacaatcagatc
acccttgaagatgtgacaccactggtggaaggagggaaggccgatccctttgagaaccac
tctgcgttggagatcgcagagcagctcactctgctggaccacctggtatttaaggtcatc
ccatatgcggaattctttggacaaggctggatgaagaatgacaaaaatgagaagacgccg
tacatcatgagaacaacaaagcacttcaatgatataagcaaccttattgccacagagatc
ctgcgctgtgaggatgtggtcactcgagtagcggtcatagagaaatgggtggctgtagca
gacatctgtcgctgtctccacaactacaacgccgtgcttgagatcacctcctccctcaac
cgcagctctgtcttccgcctcaagaagacctggctcaaggtttccaagcagacaaaagca
ttgattgacaagcttcagaagctagtctcatcagaggggaggttcaaaaacctcagagag
gctttgaagaactgtgatcctccctgtgtgccctatctggggatgtacctcactgacctg
gctttcattgaggagggaacgccaaactacaccgaagacaacttggtcaacttctcaaag
atgagaatgatttctcacataatcagagaaatcaggcagtttcagcaaacagcatacaag
attgacctgcaaccaaaggtagcccagtatctactggataacagctttgttctggatgaa
gaaagcctgtatgaagcgtcactcagaattgagcccaaagtgcccaactga
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