Siniperca chuatsi (mandarin fish): 122874383
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Entry
122874383 CDS
T08948
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122874383 (chd2)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122874383 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
122874383
NCBI-ProteinID:
XP_044048064
LinkDB
All DBs
Position
LG4:12762387..12790169
Genome browser
AA seq
1841 aa
AA seq
DB search
MIVHTSSNFLTVNTRTKDHPIKDFQDNTMMKNKSKKQEDEGSTQSNASSNSASEESNRSA
SESGSQSESEHGSERRRSHNSESNSSSESESHSESESESAESKSQQTTAEVKDKPVRKKE
RLADVKKMWDEHPDVYGVRRSNRSRQEPARLNIGAGGSSDSESESPKRKTSRAKKKENIW
KDDDSNDEEEDEEEASDSTDSEQEEKKVRSRRLPARRPQTKSSTAKKQLSQKGRKSRKQE
SSAEEDDDDDDDDDDDDDDDEEDTPKRQTRRRGATKVKSYKEDQHDFETDSDDLIEMTGE
AGEEQQDDDSETIERVMDTRIGKKGATGASTTGYAVEENGDPCEGFDPETDEGEAQYLIK
WKGWSYIHNTWESMDSLTLQKVKGLKKLDNYKKKQEELNAWLRKASPEDIEFHNCQQELT
CDLSKQFQFVERVIATKTGKTPGTSDFPSHSHKTPSSNEPEYLCKWMGLPYSECSWEDGA
LVGKKFQSCIDSFRNRNSCKTVPSKDCKVLKQRPRFVALKKQPSYIGDDNLQLRDYQLDG
LNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVVPLSTLTSWQRE
FDTWAPDMNVVVYLGDVMSRKTIRDYEWVNHQTKRIRFNALLTTYEILLKDKGVLGNINW
AFLGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLLHFLMPDKFDSW
EDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVDMTAQQKQFYKW
ILTRNYKALYKGTRGSSSGFLNIIMELKKCCNHSFLIKQPEDGDTETQQEHLQSLVRGSG
KLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAKNRYPFQRLDGSIKGEIRKQALD
HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVN
IYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGNTNSNPFNKEELTAI
LKFGAAELFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDELLSQFKVANFSSMEE
STTEFEGRPIREWDEIIPEEQRRKIEEEEKQREMEDIFMLPRSRSSNKRARANDSDSDVG
SKLKHRSSGSESETDDSDDDKKPKKRGRPRARKNNVEGFTDAEIRRFIKAYKKFGSPLER
LEAIARDSELVDKSIADLKRLGELIHTSCVTAVQEHEEHLKENPVEAKGPGKRRGINIKI
SGVQVNAKTIIQHEEEFEPLHKVVPSDPAERNKFQLTCRVKVAHFDVDWDLQDDIQLLLG
IYEHGFGNWDLIKTDPDLKLADKILPDDPSKKPQGKQLQARAEYLLKLLKKEQDSSDQSK
TGEEVKVKKRKPRVKKENKILKDEQGNDISSPHLSDNPSEEGEVKDDGTEKSPAKKRQKK
KDNKENKEKQGTPKKERDGDKEKKGTKPRKEKAKAAKGKKTQGPVHITAGSDPIPIEGKE
DDELDQETFSICKERMRPVKKALKQLDKPDEGLSDQEQLQHTRTCLLKIGDRITECLKAY
SDPDHVKIWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRSHEEEKEHKKKEDTAGRVKSF
RPEPSGSSRDSTGTQPSSKSASHQSGSHGHHREPYNAANKRHFGNDDRGDWQRDRKYSYP
GNSNQSWQGDRHHPYDRYKDHYGDRRSQGDSYRSSGSYRNNSSPRKRPYEQYSNDRDHRG
HRPYYDRHPDPKRRRSDEFRPNYHQGREGPLQDFRRMPDPRPTGPPGPEHYSRPFHPDKP
PPLLDPRSPQAQKSPQDSRSPSERPAEPNASADPNWNNRKT
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcatacttcctctaactttttgacagtaaataccaggacaaaagatcatcct
atcaaagattttcaggataatacgatgatgaagaataaaagtaagaaacaagaggatgaa
ggttcgactcaaagcaatgcatcaagcaattcagcgtcagaagaatccaaccgctctgcg
tcggagtcaggaagtcagtcagagagcgagcatggcagtgagaggaggagatcccacaac
tccgagtcgaacagctcctcagagtcagagagtcactcagagtcagagagcgagtctgca
gagtccaaatcacagcaaaccacagcagaagtcaaagacaagccagttagaaagaaggag
cgtctggcagatgtgaagaagatgtgggatgaacatccagatgtgtatggggtcaggagg
tcgaatcgcagcagacaggagccggctcgtttaaacattggagctgggggtagcagtgac
tcagagagtgaaagtcccaagagaaaaacatcacgagctaagaaaaaggaaaatatctgg
aaagatgatgactcaaatgatgaagaggaggatgaggaggaggcttccgacagtacagac
agtgaacaggaagagaaaaaagttagatccagacgacttcctgctagaagacctcagacc
aaatcatcaacagccaaaaagcagctgtctcaaaaaggaaggaagtccaggaaacaggag
tcgtctgctgaagaagacgacgacgatgacgatgacgacgacgatgatgatgatgacgat
gaggaagacactccgaagagacaaactcgaagaaggggtgcaacaaaagtaaaaagttat
aaagaagaccaacatgactttgaaacagactctgatgacctgattgaaatgacgggggaa
gcaggcgaggagcagcaggatgatgacagtgagaccattgagagggttatggacaccagg
ataggcaaaaaaggagccactggggcttccactactggttatgctgtggaggaaaatggg
gacccgtgtgaaggctttgaccccgagactgatgaaggggaggctcagtatctgattaag
tggaagggctggtcctacatccacaacacatgggagagtatggactctctgacgctgcaa
aaggtcaagggactaaagaaactggacaactacaaaaagaaacaagaagagctcaatgca
tggttgaggaaggcatcccctgaggatatagagtttcataactgccaacaggagctcact
tgtgacttgagcaagcagtttcagtttgtggaacgtgttatcgcaacaaaaacaggaaag
acaccaggaacctctgacttcccctcccacagtcacaagacaccatcctccaatgagcca
gagtatctatgcaagtggatgggcttaccctattcagagtgcagctgggaagatggagct
ttggttggaaagaagtttcagtcctgcattgacagcttcagaaaccgaaactcctgtaaa
accgtcccctctaaagactgcaaggtgttaaagcaaagaccaaggtttgttgctctgaag
aaacaaccatcatatattggagatgacaaccttcagctgagagattatcagctggacggg
ttgaactggttggctcactcctggtgcaggtgcaatagtgtcatcctcgctgatgagatg
gggcttggaaagaccatccagaccatctccttcctgtcctacctgtttcaccagcatcag
ctgtatgggccctttatagtggtggtgcccctgtccacactcacctcctggcagagggag
tttgacacctgggccccggacatgaacgtggtggtctaccttggtgacgtcatgagcagg
aaaacgatccgtgactacgagtgggtgaaccatcaaacgaaaagaattcgtttcaatgca
ttattaaccacttatgaaattctacttaaagacaagggggtgcttgggaacatcaactgg
gcgttcctgggtgtggatgaagctcacaggctgaagaatgatgactccctgctgtacaaa
acattaatggagttcaggtccaaccacagactcctcattactggcactccgctacagaac
tccctcaaagagctctggtcactgttgcacttcctcatgcctgacaagtttgattcctgg
gaggattttgaggatgaacatgggaaaggaagggataatggttatcagagtcttcacaaa
gtccttgagcccttccttctgcgacgtgtcaagaaagatgtagaaaaatctctccccgcc
aaggtggaacagatccttcgtgtagacatgactgcacagcagaaacaattttacaagtgg
attttaacaaggaattacaaagctctttacaaaggcacccgaggtagctcctccggcttc
ctgaacatcattatggagcttaaaaagtgctgcaaccatagtttcctcattaaacagcct
gaagatggagacactgaaacacaacaggaacacctgcagagtctagtgaggggcagcggg
aagctggtgctgctggacaagctgctgaccagactcagagaaagaggcaaccgagtccta
atcttctcccagatggttaggatgttggacattctggctgaatacctcgccaagaatcgc
tacccattccagcggctggacggttccataaagggagaaatccgaaagcaagcacttgac
cacttcaatgcagaaggctcagaggacttctgcttcctgttgtccaccagagctggaggt
ttagggataaacttggcctcagcagacactgtagtcatcttcgactctgactggaaccct
caaaacgacctgcaggcacaagccagggctcacaggattggccagaagaaacaggtgaat
atttatcgactggtcaccaaaggaacagtggaggaggacatcattgagcgggcaaagaag
aagatggttttggaccatcttgtcattcagagaatggacaccactggtcgaactgtactg
gacaacaactcaggaaacacgaattcaaacccattcaataaagaagaacttactgccatc
ctcaagtttggtgccgcagagcttttcaaagaggcagaaggagaggagtctgaaccgcag
gagatggatattgatgagatcctgaggttggctgaaacaagagaaagtgaccaaggctca
agtgctacagatgaacttctatctcagtttaaggtggccaatttctccagcatggaagag
agcactacagagtttgaggggaggcccatacgggaatgggatgaaatcatccctgaagag
cagcgacgcaaaattgaggaggaggagaagcagcgggagatggaggacatcttcatgctg
cccagaagcaggagctctaacaagagggctcgggccaatgacagtgatagtgatgtgggt
tccaagctgaagcaccgctcctcaggctctgagagcgagactgatgacagtgatgatgac
aagaagccaaagaagagaggcagacccagagcccgcaaaaacaatgtggagggtttcact
gatgcagagatacgcaggttcattaaggcatacaagaaatttggatctccacttgaaagg
ttggaggccatcgcccgagactctgagctggttgacaaatccatagcagacctgaagaga
cttggtgaactgattcatactagttgtgtgactgcagtgcaggagcatgaggaacacctg
aaagagaacccagttgaagccaaaggtccagggaaacggcgaggaattaacatcaagatc
tcaggagtgcaggtcaacgccaagaccattatccagcacgaagaagagtttgagcctctg
cacaaagtagtgccctcagatcctgctgagagaaataagttccagctgacatgcagagtc
aaggtagcccactttgatgtagactgggatctgcaggatgacattcagctcttgcttggt
atctatgagcacggctttggcaactgggatctgatcaagacggatcctgaccttaaactc
gctgataagattctcccagacgatccaagcaagaagcctcagggcaagcagttgcaggcg
agagccgagtatcttctcaagctgctgaaaaaagaacaagacagttcagaccagtctaaa
acaggggaggaggtcaaagtgaagaagaggaagcctcgggtgaaaaaggagaacaagatt
ctcaaggatgagcagggcaacgacatctcctccccccacctgtccgacaacccttcggag
gagggtgaggtcaaggatgatggaacagagaagtcccctgccaagaaaagacaaaagaaa
aaggataacaaagagaacaaagaaaaacagggaactcctaaaaaggagagggacggggac
aaagaaaaaaagggtaccaagcccagaaaagaaaaggctaaagcggccaaagggaagaag
actcaaggtccagttcacattacggctgggtctgaccccattcccattgaaggaaaggag
gatgatgaactcgatcaggagactttcagtatttgtaaggagcgcatgaggccggtgaaa
aaggccctgaagcagttggataaaccagatgagggtctgtctgaccaggagcagctccag
cacactcgcacatgcctactgaagattggagaccgaatcacagagtgccttaaagcttac
agtgaccccgaccatgtcaaaatatggcgtagaaacctctggatatttgtgtctaagttt
acagagtttggtgcaaggaagctccacaagctttacaaaatggcacagaagaagcgatca
catgaagaagagaaggagcataagaagaaggaggatactgcagggagggtaaaatctttc
agaccagagccctctggttccagtcgagactccacgggtactcagccatcctccaaatct
gcatctcaccagtcaggctcccacggacaccacagagagccgtacaacgcagctaataag
cggcactttggcaatgacgataggggagactggcagagggaccgtaaatacagttaccca
ggtaacagcaaccagtcatggcagggagacagacatcatccctatgatcgctacaaggat
cattatggtgatcgacgttcacaaggagactcctaccgcagctcaggcagttaccgcaac
aacagctcccctcgaaaaaggccatatgagcagtacagcaatgaccgggaccacaggggt
catcgaccctattacgacaggcatccagaccccaaaagaagacgttctgatgaattccgt
cccaactaccaccaaggaagagaaggccctcttcaggacttcaggaggatgccagacccc
aggccgacaggtccacctgggccagaacactatagcaggcccttccaccctgacaaacct
cctccactgctggaccctcgctccccgcaggctcagaagtctccccaggattcccgctct
ccatctgagaggcccgcagagccgaacgcttcagcagatcctaactggaacaacaggaaa
acataa
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integrated database retrieval system
